Chlorine in PDB 8sp4: Crystal Structure of N-Terminally Truncated Escherichia Coli Rapa in Complex with Atp-Gamma-S

The structure of Crystal Structure of N-Terminally Truncated Escherichia Coli Rapa in Complex with Atp-Gamma-S, PDB code: 8sp4 was solved by G.X.Shaw, S.Kakar, X.Ji, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	29.95 / 2.40
Space group	P 32 2 1
Cell size a, b, c (Å), α, β, γ (°)	180.213, 180.213, 61.031, 90, 90, 120
R / Rfree (%)	19.2 / 23.9

The binding sites of Chlorine atom in the Crystal Structure of N-Terminally Truncated Escherichia Coli Rapa in Complex with Atp-Gamma-S (pdb code 8sp4). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 7 binding sites of Chlorine where determined in the Crystal Structure of N-Terminally Truncated Escherichia Coli Rapa in Complex with Atp-Gamma-S, PDB code: 8sp4:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5; 6; 7;

Chlorine binding site 1 out of 7 in the Crystal Structure of N-Terminally Truncated Escherichia Coli Rapa in Complex with Atp-Gamma-S


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of N-Terminally Truncated Escherichia Coli Rapa in Complex with Atp-Gamma-S within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl1002 b:44.4 occ:1.00 N A:ASP257 3.3 30.3 1.0 N A:GLU209 3.3 33.9 1.0 N A:LEU256 3.7 32.5 1.0 CB A:ASP257 3.7 27.2 1.0 CB A:LEU256 3.8 34.9 1.0 CB A:GLU209 3.8 42.1 0.5 CB A:GLU209 3.8 42.7 0.5 CA A:PRO208 3.9 36.7 1.0 CB A:SER255 4.0 24.6 1.0 C A:PRO208 4.1 36.4 1.0 CA A:LEU256 4.1 31.1 1.0 CA A:GLU209 4.1 37.1 0.5 CA A:GLU209 4.1 37.7 0.5 CA A:ASP257 4.1 34.1 1.0 C A:LEU256 4.1 33.3 1.0 OG A:SER255 4.2 33.1 1.0 O A:VAL207 4.5 30.0 1.0 C A:SER255 4.5 33.6 1.0 O A:HOH1351 4.6 37.2 1.0 OE1 A:GLU209 4.7 51.1 0.5 CA A:SER255 4.7 33.5 1.0 CB A:PRO208 4.8 32.4 1.0 CG A:LEU256 4.9 40.1 1.0 CD1 A:LEU256 4.9 46.2 1.0 N A:PRO208 5.0 39.1 1.0

Chlorine binding site 2 out of 7 in the Crystal Structure of N-Terminally Truncated Escherichia Coli Rapa in Complex with Atp-Gamma-S


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of N-Terminally Truncated Escherichia Coli Rapa in Complex with Atp-Gamma-S within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl1003 b:45.4 occ:1.00 O A:HOH1269 3.1 48.8 1.0 N A:GLU568 3.1 46.6 1.0 NH2 A:ARG596 3.2 54.2 1.0 OG A:SER567 3.5 55.3 1.0 CA A:SER567 3.8 56.7 1.0 CD A:ARG570 3.9 52.2 1.0 CG A:ARG570 3.9 42.2 1.0 CE2 A:PHE534 4.0 57.4 1.0 C A:SER567 4.0 59.1 1.0 CB A:ARG570 4.0 46.6 1.0 NE A:ARG570 4.0 46.5 1.0 CA A:GLU568 4.0 47.4 1.0 N A:ARG570 4.0 40.7 1.0 CB A:SER567 4.1 47.4 1.0 CB A:GLU568 4.1 46.2 1.0 N A:GLY569 4.2 45.4 1.0 CZ A:ARG596 4.2 46.4 1.0 C A:GLU568 4.3 45.0 1.0 CD2 A:PHE534 4.4 52.1 1.0 NE A:ARG596 4.5 63.8 1.0 CA A:ARG570 4.6 42.9 1.0 OE1 A:GLU568 4.6 56.1 1.0 O A:ARG570 4.7 41.4 1.0 CE2 A:PHE572 4.8 45.5 1.0 CG A:GLU568 4.8 44.5 1.0 CZ A:PHE534 4.9 53.0 1.0

Chlorine binding site 3 out of 7 in the Crystal Structure of N-Terminally Truncated Escherichia Coli Rapa in Complex with Atp-Gamma-S


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of N-Terminally Truncated Escherichia Coli Rapa in Complex with Atp-Gamma-S within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl1004 b:62.8 occ:1.00 N A:LEU583 2.8 38.5 1.0 O A:LEU468 3.1 52.3 1.0 CG A:GLN618 3.3 50.9 1.0 CB A:ASP582 3.5 40.3 1.0 CD2 A:LEU468 3.5 54.0 1.0 O A:HOH1267 3.5 47.1 1.0 CA A:ASP582 3.6 33.4 1.0 CB A:LEU583 3.6 35.4 1.0 CA A:LEU583 3.6 32.4 1.0 C A:ASP582 3.6 39.8 1.0 O A:LEU583 3.7 41.5 1.0 CD A:GLN618 3.8 55.7 1.0 NE2 A:GLN618 3.8 51.0 1.0 CB A:GLN618 4.0 41.6 1.0 C A:LEU468 4.1 42.2 1.0 C A:LEU583 4.1 36.2 1.0 CB A:LEU468 4.2 46.7 1.0 CA A:GLN618 4.3 40.7 1.0 CA A:LEU468 4.3 41.0 1.0 CE1 A:TYR469 4.4 44.0 1.0 CG A:LEU583 4.4 41.7 1.0 CG A:LEU468 4.4 49.6 1.0 OE1 A:GLN618 4.6 37.8 1.0 CD1 A:TYR469 4.6 44.3 1.0 CG A:ASP582 4.8 40.8 1.0 O A:ASP582 4.8 35.1 1.0 O A:HOH1181 5.0 41.9 1.0 N A:GLN618 5.0 44.0 1.0

Chlorine binding site 4 out of 7 in the Crystal Structure of N-Terminally Truncated Escherichia Coli Rapa in Complex with Atp-Gamma-S


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of N-Terminally Truncated Escherichia Coli Rapa in Complex with Atp-Gamma-S within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl1005 b:59.4 occ:1.00 O A:HOH1301 3.0 47.6 1.0 N A:SER323 3.1 30.4 1.0 OG A:SER323 3.3 43.8 1.0 CA A:GLY320 3.5 43.4 1.0 N A:GLU322 3.5 37.5 1.0 C A:GLY320 3.6 55.9 1.0 N A:MET321 3.6 41.2 1.0 CB A:SER323 3.6 40.7 1.0 OE1 A:GLU322 3.7 48.7 1.0 CB A:GLU322 3.8 37.0 1.0 CA A:GLU322 3.9 38.3 1.0 CA A:SER323 4.0 37.4 1.0 C A:GLU322 4.0 45.5 1.0 O A:GLY320 4.2 58.7 1.0 C A:MET321 4.3 47.1 1.0 CA A:MET321 4.5 40.1 1.0 CD A:GLU322 4.6 52.4 1.0 O A:HOH1262 4.8 44.7 1.0 CG A:GLU322 4.8 47.8 1.0 N A:GLY320 4.8 42.1 1.0

Chlorine binding site 5 out of 7 in the Crystal Structure of N-Terminally Truncated Escherichia Coli Rapa in Complex with Atp-Gamma-S


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Crystal Structure of N-Terminally Truncated Escherichia Coli Rapa in Complex with Atp-Gamma-S within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl1006 b:78.3 occ:1.00 N A:ALA617 3.3 38.9 1.0 CE A:MET467 3.4 55.0 1.0 CB A:MET467 3.4 49.8 1.0 CA A:THR616 3.5 44.1 1.0 CB A:THR616 3.5 46.5 1.0 CG A:MET467 3.6 43.0 1.0 CD1 A:ILE448 3.7 36.1 1.0 C A:THR616 3.8 46.6 1.0 SD A:MET467 3.9 88.9 1.0 CG A:PRO657 3.9 51.1 1.0 CG2 A:THR616 4.1 40.2 1.0 O A:MET467 4.1 47.6 1.0 CB A:ALA617 4.4 37.9 1.0 CA A:ALA617 4.4 43.1 1.0 CD A:PRO657 4.5 43.1 1.0 CA A:MET467 4.6 45.5 1.0 C A:MET467 4.7 47.7 1.0 CG1 A:ILE448 4.7 47.8 1.0 OG1 A:THR616 4.7 37.7 1.0 O A:LYS615 4.7 51.3 1.0 N A:THR616 4.8 45.7 1.0 CG2 A:ILE448 4.9 45.9 1.0 O A:LEU654 5.0 51.1 1.0 CB A:PRO657 5.0 48.3 1.0 O A:THR616 5.0 44.8 1.0

Chlorine binding site 6 out of 7 in the Crystal Structure of N-Terminally Truncated Escherichia Coli Rapa in Complex with Atp-Gamma-S


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 6 of Crystal Structure of N-Terminally Truncated Escherichia Coli Rapa in Complex with Atp-Gamma-S within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl1007 b:81.2 occ:1.00 N A:MET123 2.9 58.5 1.0 CB A:ARG122 3.4 57.6 1.0 CB A:MET123 3.6 51.9 1.0 CA A:ARG122 3.7 46.1 1.0 C A:ARG122 3.7 53.8 1.0 CG A:MET123 3.7 57.4 1.0 CA A:MET123 3.8 53.3 1.0 CB A:ALA867 3.9 55.1 1.0 NH2 A:ARG122 4.1 62.5 1.0 CZ A:ARG122 4.2 61.3 1.0 N A:ASP124 4.3 49.3 1.0 OD1 A:ASP124 4.3 64.4 1.0 NE A:ARG122 4.4 51.9 1.0 CG A:ARG122 4.4 63.8 1.0 C A:MET123 4.6 49.2 1.0 NH1 A:ARG122 4.6 71.3 1.0 O A:ARG122 4.9 43.8 1.0 CG A:ASP124 4.9 54.6 1.0

Chlorine binding site 7 out of 7 in the Crystal Structure of N-Terminally Truncated Escherichia Coli Rapa in Complex with Atp-Gamma-S


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 7 of Crystal Structure of N-Terminally Truncated Escherichia Coli Rapa in Complex with Atp-Gamma-S within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl1008 b:79.5 occ:1.00 OG A:SER503 2.4 55.8 1.0 N A:SER503 3.0 58.1 1.0 C A:HIS501 3.3 51.5 1.0 CB A:SER503 3.4 48.4 1.0 N A:ARG502 3.4 56.3 1.0 CA A:HIS501 3.4 52.8 1.0 CA A:SER503 3.6 54.2 1.0 O A:HIS501 3.8 51.0 1.0 N A:GLN504 3.9 49.3 1.0 C A:ARG502 4.0 52.4 1.0 C A:SER503 4.1 54.3 1.0 O A:HOH1214 4.2 48.9 1.0 CA A:ARG502 4.3 52.0 1.0 CB A:HIS501 4.3 59.7 1.0 O A:SER500 4.4 57.6 1.0 N A:HIS501 4.4 52.5 1.0 CG A:GLN504 4.5 60.0 1.0 C A:SER500 4.8 53.9 1.0 CB A:GLN504 4.8 58.4 1.0 CG A:HIS501 4.9 62.4 1.0 CD2 A:HIS501 5.0 64.6 1.0

G.X.Shaw, S.Kakar, X.Ji. Crystal Structure of N-Terminally Truncated Escherichia Coli Rapa in Complex with Atp-Gamma-S To Be Published.