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Chlorine in PDB 8sr2: Particulate Methane Monooxygenase Incubated with 4,4,4- Trifluorobutanol

Enzymatic activity of Particulate Methane Monooxygenase Incubated with 4,4,4- Trifluorobutanol

All present enzymatic activity of Particulate Methane Monooxygenase Incubated with 4,4,4- Trifluorobutanol:
1.14.13.25; 1.14.18.3;

Other elements in 8sr2:

The structure of Particulate Methane Monooxygenase Incubated with 4,4,4- Trifluorobutanol also contains other interesting chemical elements:

Copper (Cu) 12 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Particulate Methane Monooxygenase Incubated with 4,4,4- Trifluorobutanol (pdb code 8sr2). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Particulate Methane Monooxygenase Incubated with 4,4,4- Trifluorobutanol, PDB code: 8sr2:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in 8sr2

Go back to Chlorine Binding Sites List in 8sr2
Chlorine binding site 1 out of 3 in the Particulate Methane Monooxygenase Incubated with 4,4,4- Trifluorobutanol


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Particulate Methane Monooxygenase Incubated with 4,4,4- Trifluorobutanol within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl301

b:30.0
occ:1.00
CZ C:PHE177 3.8 48.8 1.0
NE2 C:HIS245 3.8 63.2 1.0
CU C:CU302 4.0 91.1 1.0
CZ C:PHE248 4.1 57.2 1.0
OD2 C:ASP156 4.3 44.8 1.0
CE1 C:PHE248 4.3 57.2 1.0
CE1 C:PHE177 4.3 48.8 1.0
CD2 C:HIS245 4.4 63.2 1.0
OE2 C:GLU176 4.5 44.8 1.0
OD1 C:ASN227 4.5 62.5 1.0
CE1 C:PHE240 4.5 61.1 1.0
CZ C:PHE240 4.5 61.1 1.0
CE2 C:PHE248 4.5 57.2 1.0
O C:HOH401 4.6 30.0 1.0
CE1 C:HIS245 4.6 63.2 1.0
CE2 C:PHE177 4.9 48.8 1.0
CG C:ASN227 4.9 62.5 1.0
OE1 C:GLU176 4.9 44.8 1.0
CD1 C:PHE248 5.0 57.2 1.0
CD2 B:LEU43 5.0 51.6 1.0

Chlorine binding site 2 out of 3 in 8sr2

Go back to Chlorine Binding Sites List in 8sr2
Chlorine binding site 2 out of 3 in the Particulate Methane Monooxygenase Incubated with 4,4,4- Trifluorobutanol


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Particulate Methane Monooxygenase Incubated with 4,4,4- Trifluorobutanol within 5.0Å range:
probe atom residue distance (Å) B Occ
G:Cl302

b:30.0
occ:1.00
CZ G:PHE177 3.8 48.8 1.0
NE2 G:HIS245 3.8 63.2 1.0
CU G:CU303 4.0 91.1 1.0
CZ G:PHE248 4.1 57.2 1.0
OD2 G:ASP156 4.3 44.8 1.0
CE1 G:PHE248 4.3 57.2 1.0
CE1 G:PHE177 4.3 48.8 1.0
CD2 G:HIS245 4.4 63.2 1.0
OE2 G:GLU176 4.5 44.8 1.0
OD1 G:ASN227 4.5 62.5 1.0
CE1 G:PHE240 4.5 61.1 1.0
CZ G:PHE240 4.5 61.1 1.0
CE2 G:PHE248 4.5 57.2 1.0
O G:HOH401 4.6 30.0 1.0
CE1 G:HIS245 4.6 63.2 1.0
CE2 G:PHE177 4.9 48.8 1.0
CG G:ASN227 4.9 62.5 1.0
OE1 G:GLU176 4.9 44.8 1.0
CD1 G:PHE248 5.0 57.2 1.0

Chlorine binding site 3 out of 3 in 8sr2

Go back to Chlorine Binding Sites List in 8sr2
Chlorine binding site 3 out of 3 in the Particulate Methane Monooxygenase Incubated with 4,4,4- Trifluorobutanol


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Particulate Methane Monooxygenase Incubated with 4,4,4- Trifluorobutanol within 5.0Å range:
probe atom residue distance (Å) B Occ
K:Cl301

b:30.0
occ:1.00
CZ K:PHE177 3.8 48.8 1.0
NE2 K:HIS245 3.8 63.2 1.0
CU K:CU302 4.0 91.1 1.0
CZ K:PHE248 4.1 57.2 1.0
OD2 K:ASP156 4.3 44.8 1.0
CE1 K:PHE248 4.3 57.2 1.0
CE1 K:PHE177 4.3 48.8 1.0
CD2 K:HIS245 4.4 63.2 1.0
OE2 K:GLU176 4.5 44.8 1.0
OD1 K:ASN227 4.5 62.5 1.0
CE1 K:PHE240 4.5 61.1 1.0
CZ K:PHE240 4.5 61.1 1.0
CE2 K:PHE248 4.5 57.2 1.0
O K:HOH401 4.6 30.0 1.0
CE1 K:HIS245 4.6 63.2 1.0
CE2 K:PHE177 4.9 48.8 1.0
CG K:ASN227 4.9 62.5 1.0
OE1 K:GLU176 4.9 44.8 1.0
CD1 K:PHE248 5.0 57.2 1.0

Reference:

F.J.Tucci, R.J.Jodts, B.M.Hoffman, A.C.Rosenzweig. Product Analogue Binding Identifies the Copper Active Site of Particulate Methane Monooyxgenase Nat Catal 2023.
ISSN: ESSN 2520-1158
Page generated: Thu Dec 28 03:29:51 2023

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