Chlorine in PDB 8t1r: Crystal Structure of Human CPSF73 Catalytic Segment in Complex with Compound 2

Protein crystallography data

The structure of Crystal Structure of Human CPSF73 Catalytic Segment in Complex with Compound 2, PDB code: 8t1r was solved by J.Huang, L.Tong, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 64.25 / 2.20
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 58.803, 82.311, 102.784, 90, 90, 90
R / Rfree (%) 19.6 / 25

Other elements in 8t1r:

The structure of Crystal Structure of Human CPSF73 Catalytic Segment in Complex with Compound 2 also contains other interesting chemical elements:

Iron (Fe) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Human CPSF73 Catalytic Segment in Complex with Compound 2 (pdb code 8t1r). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Human CPSF73 Catalytic Segment in Complex with Compound 2, PDB code: 8t1r:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 8t1r

Go back to Chlorine Binding Sites List in 8t1r
Chlorine binding site 1 out of 2 in the Crystal Structure of Human CPSF73 Catalytic Segment in Complex with Compound 2


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Human CPSF73 Catalytic Segment in Complex with Compound 2 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl505

b:82.2
occ:1.00
CE A:LYS33 3.6 74.6 1.0
NH1 A:ARG35 3.7 59.5 1.0
NH2 A:ARG35 3.8 62.6 1.0
CB A:ALA170 4.0 44.6 1.0
CZ A:ARG35 4.2 70.8 1.0
CD A:LYS33 4.4 69.9 1.0
NZ A:LYS33 4.7 83.0 1.0
CA A:ALA170 4.8 45.0 1.0

Chlorine binding site 2 out of 2 in 8t1r

Go back to Chlorine Binding Sites List in 8t1r
Chlorine binding site 2 out of 2 in the Crystal Structure of Human CPSF73 Catalytic Segment in Complex with Compound 2


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Human CPSF73 Catalytic Segment in Complex with Compound 2 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl506

b:85.6
occ:1.00
O A:HOH670 3.0 54.0 1.0
NH2 A:ARG15 3.4 46.6 1.0
NH1 A:ARG15 3.6 40.6 1.0
CZ A:ARG15 4.0 46.7 1.0
CB A:ALA453 4.0 43.4 1.0

Reference:

J.Huang, L.Tong. Anticancer Benzoxaboroles Inhibit Pre-Mrna Processing By Direct Inhibition of CPSF3 To Be Published.
Page generated: Tue Jul 30 12:42:27 2024

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