Chlorine in PDB 8t52: Hiv-1 Integrase Catalytic Core Domain (Ccd) F185H/Y99H/A128T Mutant Complexed with Ekc-110

Protein crystallography data

The structure of Hiv-1 Integrase Catalytic Core Domain (Ccd) F185H/Y99H/A128T Mutant Complexed with Ekc-110, PDB code: 8t52 was solved by T.Dinh, M.Kvaratskhelia, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 31.73 / 2.07
Space group P 31 2 1
Cell size a, b, c (Å), α, β, γ (°) 72.243, 72.243, 66.423, 90, 90, 120
R / Rfree (%) 26.4 / 31.4

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Hiv-1 Integrase Catalytic Core Domain (Ccd) F185H/Y99H/A128T Mutant Complexed with Ekc-110 (pdb code 8t52). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Hiv-1 Integrase Catalytic Core Domain (Ccd) F185H/Y99H/A128T Mutant Complexed with Ekc-110, PDB code: 8t52:

Chlorine binding site 1 out of 1 in 8t52

Go back to Chlorine Binding Sites List in 8t52
Chlorine binding site 1 out of 1 in the Hiv-1 Integrase Catalytic Core Domain (Ccd) F185H/Y99H/A128T Mutant Complexed with Ekc-110


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Hiv-1 Integrase Catalytic Core Domain (Ccd) F185H/Y99H/A128T Mutant Complexed with Ekc-110 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl301

b:29.3
occ:1.00
CL32 A:QD6301 0.0 29.3 1.0
C31 A:QD6301 1.9 26.6 1.0
C33 A:QD6301 2.9 26.2 1.0
C30 A:QD6301 2.9 27.8 1.0
H331 A:QD6301 3.0 31.5 1.0
H301 A:QD6301 3.0 33.5 1.0
HE3 A:MET178 3.3 36.9 1.0
HG2 A:MET178 4.0 27.5 1.0
CE A:MET178 4.2 30.7 1.0
C34 A:QD6301 4.2 29.4 1.0
C29 A:QD6301 4.3 26.3 1.0
SD A:MET178 4.4 34.0 1.0
HE1 A:MET178 4.6 36.9 1.0
CG A:MET178 4.6 22.8 1.0
C28 A:QD6301 4.8 25.9 1.0
HG3 A:MET178 4.8 27.5 1.0
HE2 A:MET178 4.9 36.9 1.0
HG22 A:THR174 4.9 30.4 1.0
HG23 A:THR174 5.0 30.4 1.0

Reference:

T.Dinh, M.Kvaratskhelia. Hiv-1 Integrase Catalytic Core Domain (Ccd) Y99H/A128T Mutant Complexed with Bkc-110 To Be Published.
ISSN: ESSN 2150-7511
Page generated: Tue Jul 30 12:43:05 2024

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