Chlorine in PDB 8tow: Structure of A Mutated Photosystem II Complex Reveals Perturbation of the Oxygen-Evolving Complex

Other elements in 8tow:

The structure of Structure of A Mutated Photosystem II Complex Reveals Perturbation of the Oxygen-Evolving Complex also contains other interesting chemical elements:

Iron (Fe) 6 atoms
Manganese (Mn) 8 atoms
Magnesium (Mg) 70 atoms
Calcium (Ca) 8 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structure of A Mutated Photosystem II Complex Reveals Perturbation of the Oxygen-Evolving Complex (pdb code 8tow). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 4 binding sites of Chlorine where determined in the Structure of A Mutated Photosystem II Complex Reveals Perturbation of the Oxygen-Evolving Complex, PDB code: 8tow:
Jump to Chlorine binding site number: 1; 2; 3; 4;

Chlorine binding site 1 out of 4 in 8tow

Go back to Chlorine Binding Sites List in 8tow
Chlorine binding site 1 out of 4 in the Structure of A Mutated Photosystem II Complex Reveals Perturbation of the Oxygen-Evolving Complex


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of A Mutated Photosystem II Complex Reveals Perturbation of the Oxygen-Evolving Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl403

b:12.6
occ:1.00
 O D:HOH590 2.5 7.8 1.0
O A:HOH569 3.0 9.1 1.0
N A:GLU333 3.4 9.2 1.0
ND2 A:ASN181 3.4 3.5 1.0
CE D:LYS317 3.6 3.9 1.0
NZ D:LYS317 3.6 3.9 1.0
CA A:HIS332 3.9 7.1 1.0
CB D:LYS317 3.9 3.9 1.0
O A:HOH535 4.0 8.6 1.0
O A:HOH597 4.1 12.1 1.0
C A:HIS332 4.1 7.1 1.0
CB A:HIS332 4.2 7.1 1.0
CG D:LYS317 4.2 3.9 1.0
CG A:ASN181 4.3 3.5 1.0
CA A:GLU333 4.3 9.2 1.0
CD1 D:LEU321 4.3 3.9 1.0
OD1 A:ASN181 4.3 3.5 1.0
CG A:GLU333 4.4 9.2 1.0
CG2 A:VAL185 4.5 3.5 1.0
CD D:LYS317 4.5 3.9 1.0
CG D:LEU321 4.6 3.9 1.0
O D:HOH589 4.7 10.7 1.0
O D:LYS317 4.7 3.9 1.0
CD2 D:LEU321 4.8 3.9 1.0
CA D:LYS317 4.8 3.9 1.0
C D:LYS317 4.9 3.9 1.0
CB A:GLU333 5.0 9.2 1.0

Chlorine binding site 2 out of 4 in 8tow

Go back to Chlorine Binding Sites List in 8tow
Chlorine binding site 2 out of 4 in the Structure of A Mutated Photosystem II Complex Reveals Perturbation of the Oxygen-Evolving Complex


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Structure of A Mutated Photosystem II Complex Reveals Perturbation of the Oxygen-Evolving Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl404

b:7.0
occ:1.00
 O A:HOH589 2.9 11.4 1.0
O C:HOH608 2.9 6.8 1.0
N A:ASN338 3.2 9.2 1.0
N C:GLU341 3.4 8.4 1.0
CD2 A:PHE339 3.6 9.1 1.0
N A:PHE339 3.7 9.1 1.0
CA C:GLY340 3.7 8.2 1.0
CA A:HIS337 3.8 8.8 1.0
C A:HIS337 4.0 8.8 1.0
C C:GLY340 4.0 8.2 1.0
CA A:ASN338 4.1 9.2 1.0
O A:ALA336 4.1 7.6 1.0
CB A:ASN338 4.2 9.2 1.0
CB C:GLU341 4.3 8.4 1.0
CE2 A:PHE339 4.3 9.1 1.0
CG A:PHE339 4.3 9.1 1.0
O A:HOH548 4.3 8.5 1.0
CB A:PHE339 4.3 9.1 1.0
C A:ASN338 4.4 9.2 1.0
CA C:GLU341 4.4 8.4 1.0
CG C:GLU341 4.5 8.4 1.0
CB A:HIS337 4.5 8.8 1.0
CA A:PHE339 4.6 9.1 1.0
O C:HOH607 4.7 7.6 1.0
CG A:ASN338 4.8 9.2 1.0
N A:HIS337 4.9 8.8 1.0
O C:HOH603 4.9 8.7 1.0
N C:THR342 4.9 5.4 1.0
C A:ALA336 4.9 7.6 1.0
O A:PHE339 5.0 9.1 1.0

Chlorine binding site 3 out of 4 in 8tow

Go back to Chlorine Binding Sites List in 8tow
Chlorine binding site 3 out of 4 in the Structure of A Mutated Photosystem II Complex Reveals Perturbation of the Oxygen-Evolving Complex


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Structure of A Mutated Photosystem II Complex Reveals Perturbation of the Oxygen-Evolving Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
a:Cl403

b:12.6
occ:1.00
 O d:HOH590 2.5 7.8 1.0
O a:HOH569 3.0 9.1 1.0
N a:GLU333 3.4 9.2 1.0
ND2 a:ASN181 3.4 3.5 1.0
CE d:LYS317 3.6 3.9 1.0
NZ d:LYS317 3.6 3.9 1.0
CA a:HIS332 3.9 7.1 1.0
CB d:LYS317 3.9 3.9 1.0
O a:HOH535 4.0 8.6 1.0
O a:HOH597 4.1 12.1 1.0
C a:HIS332 4.1 7.1 1.0
CB a:HIS332 4.2 7.1 1.0
CG d:LYS317 4.2 3.9 1.0
CG a:ASN181 4.3 3.5 1.0
CA a:GLU333 4.3 9.2 1.0
CD1 d:LEU321 4.3 3.9 1.0
OD1 a:ASN181 4.3 3.5 1.0
CG a:GLU333 4.4 9.2 1.0
CG2 a:VAL185 4.5 3.5 1.0
CD d:LYS317 4.5 3.9 1.0
CG d:LEU321 4.6 3.9 1.0
O d:HOH589 4.7 10.7 1.0
O d:LYS317 4.7 3.9 1.0
CD2 d:LEU321 4.8 3.9 1.0
CA d:LYS317 4.8 3.9 1.0
C d:LYS317 4.9 3.9 1.0
CB a:GLU333 5.0 9.2 1.0

Chlorine binding site 4 out of 4 in 8tow

Go back to Chlorine Binding Sites List in 8tow
Chlorine binding site 4 out of 4 in the Structure of A Mutated Photosystem II Complex Reveals Perturbation of the Oxygen-Evolving Complex


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Structure of A Mutated Photosystem II Complex Reveals Perturbation of the Oxygen-Evolving Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
a:Cl404

b:7.0
occ:1.00
 O a:HOH589 2.9 11.4 1.0
O c:HOH608 2.9 6.8 1.0
N a:ASN338 3.2 9.2 1.0
N c:GLU341 3.4 8.4 1.0
CD2 a:PHE339 3.6 9.1 1.0
N a:PHE339 3.7 9.1 1.0
CA c:GLY340 3.7 8.2 1.0
CA a:HIS337 3.8 8.8 1.0
C a:HIS337 4.0 8.8 1.0
C c:GLY340 4.0 8.2 1.0
CA a:ASN338 4.1 9.2 1.0
O a:ALA336 4.1 7.6 1.0
CB a:ASN338 4.2 9.2 1.0
CB c:GLU341 4.3 8.4 1.0
CE2 a:PHE339 4.3 9.1 1.0
CG a:PHE339 4.3 9.1 1.0
O a:HOH548 4.3 8.5 1.0
CB a:PHE339 4.3 9.1 1.0
C a:ASN338 4.4 9.2 1.0
CA c:GLU341 4.4 8.4 1.0
CG c:GLU341 4.5 8.4 1.0
CB a:HIS337 4.5 8.8 1.0
CA a:PHE339 4.6 9.1 1.0
O c:HOH607 4.7 7.6 1.0
CG a:ASN338 4.8 9.2 1.0
N a:HIS337 4.9 8.8 1.0
O c:HOH603 4.9 8.7 1.0
N c:THR342 4.9 5.4 1.0
C a:ALA336 4.9 7.6 1.0
O a:PHE339 5.0 9.1 1.0

Reference:

D.A.Flesher, G.W.Brudvig. Mutation-Induced Shift of the Photosystem II Active Site Reveals Insight Into Conserved Water Channels To Be Published.
Page generated: Tue Jul 30 12:54:25 2024

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