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Chlorine in PDB 8u01: Crystal Structure of the Glycoside Hydrolase Family 2 Tim Barrel- Domain Containing Protein From Phocaeicola Plebeius

Protein crystallography data

The structure of Crystal Structure of the Glycoside Hydrolase Family 2 Tim Barrel- Domain Containing Protein From Phocaeicola Plebeius, PDB code: 8u01 was solved by Y.Kim, G.Joachimiak, M.Endres, A.Joachimiak, Midwest Center Forstructural Genomics (Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 69.38 / 3.00
Space group P 41 3 2
Cell size a, b, c (Å), α, β, γ (°) 230.11, 230.11, 230.11, 90, 90, 90
R / Rfree (%) 15.3 / 18.6

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of the Glycoside Hydrolase Family 2 Tim Barrel- Domain Containing Protein From Phocaeicola Plebeius (pdb code 8u01). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of the Glycoside Hydrolase Family 2 Tim Barrel- Domain Containing Protein From Phocaeicola Plebeius, PDB code: 8u01:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 8u01

Go back to Chlorine Binding Sites List in 8u01
Chlorine binding site 1 out of 2 in the Crystal Structure of the Glycoside Hydrolase Family 2 Tim Barrel- Domain Containing Protein From Phocaeicola Plebeius


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of the Glycoside Hydrolase Family 2 Tim Barrel- Domain Containing Protein From Phocaeicola Plebeius within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1001

b:85.5
occ:1.00
NZ A:LYS883 3.2 54.8 1.0
CB A:ALA722 3.4 86.3 1.0
O A:LEU727 3.7 61.5 1.0
CE A:LYS883 4.0 57.3 1.0
CA A:ALA722 4.1 87.2 1.0
N A:ASP723 4.3 77.3 1.0
C A:ALA722 4.5 76.1 1.0
N A:GLU724 4.6 63.7 1.0
CD A:LYS883 4.7 39.8 1.0
C A:LEU727 4.7 56.6 1.0
C A:ASP723 4.8 66.5 1.0
OE1 A:GLU724 4.8 78.6 1.0
CA A:GLU724 4.9 56.9 1.0
CB A:LEU727 4.9 44.1 1.0
CD2 A:LEU727 5.0 50.7 1.0
CA A:ASP723 5.0 65.4 1.0

Chlorine binding site 2 out of 2 in 8u01

Go back to Chlorine Binding Sites List in 8u01
Chlorine binding site 2 out of 2 in the Crystal Structure of the Glycoside Hydrolase Family 2 Tim Barrel- Domain Containing Protein From Phocaeicola Plebeius


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of the Glycoside Hydrolase Family 2 Tim Barrel- Domain Containing Protein From Phocaeicola Plebeius within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1002

b:74.1
occ:1.00
N A:LYS827 3.4 57.1 1.0
OD1 A:ASP826 3.7 87.7 1.0
CA A:ASP826 3.9 64.9 1.0
CG A:LYS827 4.1 45.3 1.0
CB A:LYS827 4.1 61.2 1.0
C A:ASP826 4.1 67.1 1.0
CA A:LYS827 4.3 67.6 1.0
CG A:ASP826 4.5 78.1 1.0
CB A:ASP826 4.7 61.4 1.0
N A:ASP826 4.8 68.3 1.0
O A:ILE825 4.8 56.4 1.0
CD A:LYS827 4.8 58.8 1.0
O A:VAL823 4.9 66.9 1.0

Reference:

Y.Kim, G.Joachimiak, M.Endres, A.Joachimiak, Midwest Center For Structural Genomics (Mcsg). Crystal Structure of the Glycoside Hydrolase Family 2 Tim Barrel-Domain Containing Protein From Phocaeicola Plebeius To Be Published.
Page generated: Thu Dec 28 03:33:16 2023

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