Chlorine in PDB 8v88: ALPHA7-Nicotinic Acetylcholine Receptor Bound to Epibatidine and GAT107

Other elements in 8v88:

The structure of ALPHA7-Nicotinic Acetylcholine Receptor Bound to Epibatidine and GAT107 also contains other interesting chemical elements:

Calcium (Ca) 5 atoms
Bromine (Br) 5 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the ALPHA7-Nicotinic Acetylcholine Receptor Bound to Epibatidine and GAT107 (pdb code 8v88). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 5 binding sites of Chlorine where determined in the ALPHA7-Nicotinic Acetylcholine Receptor Bound to Epibatidine and GAT107, PDB code: 8v88:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5;

Chlorine binding site 1 out of 5 in 8v88

Go back to Chlorine Binding Sites List in 8v88
Chlorine binding site 1 out of 5 in the ALPHA7-Nicotinic Acetylcholine Receptor Bound to Epibatidine and GAT107


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of ALPHA7-Nicotinic Acetylcholine Receptor Bound to Epibatidine and GAT107 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl506

b:15.3
occ:1.00
CL A:EPJ506 0.0 15.3 1.0
C10 A:EPJ506 1.7 15.3 1.0
N2 A:EPJ506 2.6 15.3 1.0
C9 A:EPJ506 2.7 15.3 1.0
HB2 B:LEU108 2.8 12.7 1.0
H9 A:EPJ506 2.8 15.3 1.0
HB3 B:LEU108 3.1 12.7 1.0
H B:LEU108 3.3 12.7 1.0
CB B:LEU108 3.4 12.7 1.0
O B:ASN106 3.5 11.5 1.0
O B:HOH602 3.6 2.5 1.0
HD13 B:LEU118 3.6 10.8 1.0
HB3 A:SER149 3.7 13.1 1.0
N B:LEU108 3.7 12.7 1.0
O B:GLN116 3.7 12.8 1.0
HB2 A:SER149 3.8 13.1 1.0
HA B:TYR117 3.8 11.2 1.0
C11 A:EPJ506 3.8 15.3 1.0
C8 A:EPJ506 4.0 15.3 1.0
H B:LEU118 4.0 10.8 1.0
HD22 B:LEU108 4.0 12.7 1.0
HA A:SER149 4.1 13.1 1.0
HA B:VAL107 4.1 11.8 1.0
CB A:SER149 4.2 13.1 1.0
HB2 B:GLN116 4.2 12.8 1.0
CA B:LEU108 4.2 12.7 1.0
HD12 B:LEU118 4.2 10.8 1.0
HB3 B:GLN116 4.2 12.8 1.0
HB2 B:LEU118 4.3 10.8 1.0
C B:GLN116 4.3 12.8 1.0
CD1 B:LEU118 4.4 10.8 1.0
C B:ASN106 4.4 11.5 1.0
HD23 B:LEU108 4.4 12.7 1.0
C7 A:EPJ506 4.5 15.3 1.0
C B:VAL107 4.5 11.8 1.0
CD2 B:LEU108 4.5 12.7 1.0
CG B:LEU108 4.6 12.7 1.0
N B:LEU118 4.6 10.8 1.0
CA B:TYR117 4.6 11.2 1.0
CA A:SER149 4.6 13.1 1.0
H11 A:EPJ506 4.6 15.3 1.0
CA B:VAL107 4.6 11.8 1.0
CB B:GLN116 4.7 12.8 1.0
HA B:LEU108 4.7 12.7 1.0
N B:TYR117 4.7 11.2 1.0
HB2 B:ASN106 4.8 11.5 1.0
H8 A:EPJ506 4.8 15.3 1.0
HD13 B:LEU108 4.9 12.7 1.0
N B:VAL107 4.9 11.8 1.0
HD11 B:LEU118 5.0 10.8 1.0

Chlorine binding site 2 out of 5 in 8v88

Go back to Chlorine Binding Sites List in 8v88
Chlorine binding site 2 out of 5 in the ALPHA7-Nicotinic Acetylcholine Receptor Bound to Epibatidine and GAT107


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of ALPHA7-Nicotinic Acetylcholine Receptor Bound to Epibatidine and GAT107 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl506

b:15.3
occ:1.00
CL B:EPJ506 0.0 15.3 1.0
C10 B:EPJ506 1.7 15.3 1.0
N2 B:EPJ506 2.6 15.3 1.0
C9 B:EPJ506 2.7 15.3 1.0
HB2 C:LEU108 2.8 12.7 1.0
H9 B:EPJ506 2.8 15.3 1.0
HB3 C:LEU108 3.1 12.7 1.0
H C:LEU108 3.3 12.7 1.0
CB C:LEU108 3.4 12.7 1.0
O C:ASN106 3.5 11.5 1.0
O C:HOH602 3.6 2.5 1.0
HD13 C:LEU118 3.6 10.8 1.0
HB3 B:SER149 3.7 13.1 1.0
N C:LEU108 3.7 12.7 1.0
O C:GLN116 3.8 12.8 1.0
HB2 B:SER149 3.8 13.1 1.0
C11 B:EPJ506 3.8 15.3 1.0
HA C:TYR117 3.9 11.2 1.0
C8 B:EPJ506 4.0 15.3 1.0
HD22 C:LEU108 4.0 12.7 1.0
H C:LEU118 4.0 10.8 1.0
HA B:SER149 4.1 13.1 1.0
HA C:VAL107 4.1 11.8 1.0
CB B:SER149 4.2 13.1 1.0
HB2 C:GLN116 4.2 12.8 1.0
CA C:LEU108 4.2 12.7 1.0
HD12 C:LEU118 4.2 10.8 1.0
HB3 C:GLN116 4.2 12.8 1.0
HB2 C:LEU118 4.3 10.8 1.0
C C:GLN116 4.3 12.8 1.0
CD1 C:LEU118 4.4 10.8 1.0
C C:ASN106 4.4 11.5 1.0
HD23 C:LEU108 4.4 12.7 1.0
C7 B:EPJ506 4.5 15.3 1.0
C C:VAL107 4.5 11.8 1.0
CD2 C:LEU108 4.5 12.7 1.0
CG C:LEU108 4.6 12.7 1.0
N C:LEU118 4.6 10.8 1.0
CA C:TYR117 4.6 11.2 1.0
CA B:SER149 4.6 13.1 1.0
H11 B:EPJ506 4.6 15.3 1.0
CA C:VAL107 4.6 11.8 1.0
CB C:GLN116 4.7 12.8 1.0
HA C:LEU108 4.7 12.7 1.0
N C:TYR117 4.7 11.2 1.0
HB2 C:ASN106 4.8 11.5 1.0
H8 B:EPJ506 4.8 15.3 1.0
HD13 C:LEU108 4.9 12.7 1.0
N C:VAL107 4.9 11.8 1.0
HD11 C:LEU118 5.0 10.8 1.0

Chlorine binding site 3 out of 5 in 8v88

Go back to Chlorine Binding Sites List in 8v88
Chlorine binding site 3 out of 5 in the ALPHA7-Nicotinic Acetylcholine Receptor Bound to Epibatidine and GAT107


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of ALPHA7-Nicotinic Acetylcholine Receptor Bound to Epibatidine and GAT107 within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl506

b:15.3
occ:1.00
CL C:EPJ506 0.0 15.3 1.0
C10 C:EPJ506 1.7 15.3 1.0
N2 C:EPJ506 2.6 15.3 1.0
C9 C:EPJ506 2.7 15.3 1.0
HB2 D:LEU108 2.8 12.7 1.0
H9 C:EPJ506 2.8 15.3 1.0
HB3 D:LEU108 3.1 12.7 1.0
H D:LEU108 3.3 12.7 1.0
CB D:LEU108 3.4 12.7 1.0
O D:ASN106 3.5 11.5 1.0
O D:HOH602 3.6 2.5 1.0
HD13 D:LEU118 3.6 10.8 1.0
HB3 C:SER149 3.7 13.1 1.0
N D:LEU108 3.7 12.7 1.0
O D:GLN116 3.8 12.8 1.0
HB2 C:SER149 3.8 13.1 1.0
HA D:TYR117 3.8 11.2 1.0
C11 C:EPJ506 3.8 15.3 1.0
C8 C:EPJ506 4.0 15.3 1.0
H D:LEU118 4.0 10.8 1.0
HD22 D:LEU108 4.0 12.7 1.0
HA C:SER149 4.1 13.1 1.0
HA D:VAL107 4.1 11.8 1.0
CB C:SER149 4.2 13.1 1.0
HB2 D:GLN116 4.2 12.8 1.0
CA D:LEU108 4.2 12.7 1.0
HD12 D:LEU118 4.2 10.8 1.0
HB3 D:GLN116 4.2 12.8 1.0
HB2 D:LEU118 4.3 10.8 1.0
C D:GLN116 4.3 12.8 1.0
CD1 D:LEU118 4.4 10.8 1.0
C D:ASN106 4.4 11.5 1.0
HD23 D:LEU108 4.4 12.7 1.0
C7 C:EPJ506 4.5 15.3 1.0
C D:VAL107 4.5 11.8 1.0
CD2 D:LEU108 4.5 12.7 1.0
CG D:LEU108 4.6 12.7 1.0
N D:LEU118 4.6 10.8 1.0
CA D:TYR117 4.6 11.2 1.0
CA C:SER149 4.6 13.1 1.0
H11 C:EPJ506 4.6 15.3 1.0
CA D:VAL107 4.6 11.8 1.0
CB D:GLN116 4.7 12.8 1.0
HA D:LEU108 4.7 12.7 1.0
N D:TYR117 4.7 11.2 1.0
HB2 D:ASN106 4.8 11.5 1.0
H8 C:EPJ506 4.8 15.3 1.0
HD13 D:LEU108 4.9 12.7 1.0
N D:VAL107 4.9 11.8 1.0
HD11 D:LEU118 5.0 10.8 1.0

Chlorine binding site 4 out of 5 in 8v88

Go back to Chlorine Binding Sites List in 8v88
Chlorine binding site 4 out of 5 in the ALPHA7-Nicotinic Acetylcholine Receptor Bound to Epibatidine and GAT107


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of ALPHA7-Nicotinic Acetylcholine Receptor Bound to Epibatidine and GAT107 within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cl506

b:15.3
occ:1.00
CL D:EPJ506 0.0 15.3 1.0
C10 D:EPJ506 1.7 15.3 1.0
N2 D:EPJ506 2.6 15.3 1.0
C9 D:EPJ506 2.7 15.3 1.0
HB2 E:LEU108 2.8 12.7 1.0
H9 D:EPJ506 2.8 15.3 1.0
HB3 E:LEU108 3.1 12.7 1.0
H E:LEU108 3.3 12.7 1.0
CB E:LEU108 3.4 12.7 1.0
O E:ASN106 3.5 11.5 1.0
O E:HOH602 3.6 2.5 1.0
HD13 E:LEU118 3.6 10.8 1.0
HB3 D:SER149 3.7 13.1 1.0
N E:LEU108 3.7 12.7 1.0
O E:GLN116 3.7 12.8 1.0
HB2 D:SER149 3.8 13.1 1.0
HA E:TYR117 3.8 11.2 1.0
C11 D:EPJ506 3.8 15.3 1.0
C8 D:EPJ506 4.0 15.3 1.0
H E:LEU118 4.0 10.8 1.0
HD22 E:LEU108 4.0 12.7 1.0
HA D:SER149 4.1 13.1 1.0
HA E:VAL107 4.1 11.8 1.0
CB D:SER149 4.2 13.1 1.0
HB2 E:GLN116 4.2 12.8 1.0
CA E:LEU108 4.2 12.7 1.0
HD12 E:LEU118 4.2 10.8 1.0
HB3 E:GLN116 4.2 12.8 1.0
HB2 E:LEU118 4.3 10.8 1.0
C E:GLN116 4.3 12.8 1.0
CD1 E:LEU118 4.4 10.8 1.0
C E:ASN106 4.4 11.5 1.0
HD23 E:LEU108 4.4 12.7 1.0
C7 D:EPJ506 4.5 15.3 1.0
C E:VAL107 4.5 11.8 1.0
CD2 E:LEU108 4.5 12.7 1.0
CG E:LEU108 4.6 12.7 1.0
N E:LEU118 4.6 10.8 1.0
CA E:TYR117 4.6 11.2 1.0
CA D:SER149 4.6 13.1 1.0
H11 D:EPJ506 4.6 15.3 1.0
CA E:VAL107 4.6 11.8 1.0
CB E:GLN116 4.7 12.8 1.0
HA E:LEU108 4.7 12.7 1.0
N E:TYR117 4.7 11.2 1.0
HB2 E:ASN106 4.8 11.5 1.0
H8 D:EPJ506 4.8 15.3 1.0
HD13 E:LEU108 4.9 12.7 1.0
N E:VAL107 4.9 11.8 1.0
HD11 E:LEU118 5.0 10.8 1.0

Chlorine binding site 5 out of 5 in 8v88

Go back to Chlorine Binding Sites List in 8v88
Chlorine binding site 5 out of 5 in the ALPHA7-Nicotinic Acetylcholine Receptor Bound to Epibatidine and GAT107


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of ALPHA7-Nicotinic Acetylcholine Receptor Bound to Epibatidine and GAT107 within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Cl505

b:15.3
occ:1.00
CL E:EPJ505 0.0 15.3 1.0
C10 E:EPJ505 1.7 15.3 1.0
N2 E:EPJ505 2.6 15.3 1.0
C9 E:EPJ505 2.7 15.3 1.0
HB2 A:LEU108 2.8 12.7 1.0
H9 E:EPJ505 2.8 15.3 1.0
HB3 A:LEU108 3.1 12.7 1.0
H A:LEU108 3.3 12.7 1.0
CB A:LEU108 3.4 12.7 1.0
O A:ASN106 3.5 11.5 1.0
O A:HOH602 3.6 2.5 1.0
HD13 A:LEU118 3.6 10.8 1.0
HB3 E:SER149 3.7 13.1 1.0
N A:LEU108 3.7 12.7 1.0
O A:GLN116 3.8 12.8 1.0
HB2 E:SER149 3.8 13.1 1.0
C11 E:EPJ505 3.8 15.3 1.0
HA A:TYR117 3.9 11.2 1.0
C8 E:EPJ505 4.0 15.3 1.0
HD22 A:LEU108 4.0 12.7 1.0
H A:LEU118 4.0 10.8 1.0
HA E:SER149 4.1 13.1 1.0
HA A:VAL107 4.1 11.8 1.0
CB E:SER149 4.2 13.1 1.0
HB2 A:GLN116 4.2 12.8 1.0
CA A:LEU108 4.2 12.7 1.0
HD12 A:LEU118 4.2 10.8 1.0
HB3 A:GLN116 4.2 12.8 1.0
HB2 A:LEU118 4.3 10.8 1.0
C A:GLN116 4.3 12.8 1.0
C A:ASN106 4.4 11.5 1.0
CD1 A:LEU118 4.4 10.8 1.0
HD23 A:LEU108 4.4 12.7 1.0
C7 E:EPJ505 4.5 15.3 1.0
C A:VAL107 4.5 11.8 1.0
CD2 A:LEU108 4.5 12.7 1.0
CG A:LEU108 4.6 12.7 1.0
N A:LEU118 4.6 10.8 1.0
CA A:TYR117 4.6 11.2 1.0
CA E:SER149 4.6 13.1 1.0
H11 E:EPJ505 4.6 15.3 1.0
CA A:VAL107 4.7 11.8 1.0
CB A:GLN116 4.7 12.8 1.0
HA A:LEU108 4.7 12.7 1.0
N A:TYR117 4.7 11.2 1.0
HB2 A:ASN106 4.8 11.5 1.0
H8 E:EPJ505 4.8 15.3 1.0
HD13 A:LEU108 4.9 12.7 1.0
N A:VAL107 4.9 11.8 1.0
HD11 A:LEU118 5.0 10.8 1.0

Reference:

S.M.Burke, M.Avstrikova, C.M.Noviello, N.Mukhtasimova, J.P.Changeux, G.A.Thakur, S.M.Sine, M.Cecchini, R.E.Hibbs. ALPHA7-Nicotinic Acetylcholine Receptor Bound to Epibatidine and GAT107 To Be Published.
Page generated: Tue Jul 30 13:32:00 2024

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