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Chlorine in PDB 8veh: Crystal Structure of Outer Membrane Lipoprotein Carrier Protein (Lola) From Rickettsia Bellii

Protein crystallography data

The structure of Crystal Structure of Outer Membrane Lipoprotein Carrier Protein (Lola) From Rickettsia Bellii, PDB code: 8veh was solved by Seattle Structural Genomics Center For Infectious Disease (Ssgcid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.55 / 2.60
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 77.802, 71.403, 78.502, 90, 115.83, 90
R / Rfree (%) 22.7 / 27.4

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Outer Membrane Lipoprotein Carrier Protein (Lola) From Rickettsia Bellii (pdb code 8veh). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 4 binding sites of Chlorine where determined in the Crystal Structure of Outer Membrane Lipoprotein Carrier Protein (Lola) From Rickettsia Bellii, PDB code: 8veh:
Jump to Chlorine binding site number: 1; 2; 3; 4;

Chlorine binding site 1 out of 4 in 8veh

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Chlorine binding site 1 out of 4 in the Crystal Structure of Outer Membrane Lipoprotein Carrier Protein (Lola) From Rickettsia Bellii


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Outer Membrane Lipoprotein Carrier Protein (Lola) From Rickettsia Bellii within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl301

b:60.6
occ:1.00
O A:HOH401 2.7 32.3 1.0
CE2 A:PHE120 3.3 51.3 1.0
CZ A:PHE120 3.5 52.8 1.0
CD2 A:HIS138 3.7 52.2 1.0
CB A:ASN107 4.1 62.8 1.0
CB A:HIS138 4.1 51.1 1.0
O A:HOH404 4.1 58.0 1.0
OD1 A:ASN107 4.2 64.2 1.0
CG A:HIS138 4.2 52.6 1.0
OG A:SER145 4.5 49.9 1.0
CG A:ASN107 4.5 66.1 1.0
CD2 A:PHE120 4.5 52.9 1.0
N A:PHE108 4.6 55.2 1.0
O A:ARG143 4.8 51.6 1.0
CB A:ARG143 4.8 57.3 1.0
CE1 A:PHE120 4.8 53.7 1.0
OG1 A:THR141 4.9 48.1 1.0
NE2 A:HIS138 4.9 57.9 1.0

Chlorine binding site 2 out of 4 in 8veh

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Chlorine binding site 2 out of 4 in the Crystal Structure of Outer Membrane Lipoprotein Carrier Protein (Lola) From Rickettsia Bellii


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Outer Membrane Lipoprotein Carrier Protein (Lola) From Rickettsia Bellii within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl302

b:83.3
occ:1.00
NE2 A:GLN47 3.6 51.1 1.0
CE2 C:TYR194 4.1 79.0 1.0
OH C:TYR194 4.2 67.0 1.0
CG2 C:ILE193 4.2 65.5 1.0
CZ C:TYR194 4.4 74.3 1.0
OH A:TYR71 4.4 51.3 1.0
CZ A:PHE75 4.7 62.1 1.0
CD A:GLN47 4.8 55.5 1.0
CE2 A:PHE75 4.9 63.4 1.0
CD2 C:TYR194 4.9 76.2 1.0

Chlorine binding site 3 out of 4 in 8veh

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Chlorine binding site 3 out of 4 in the Crystal Structure of Outer Membrane Lipoprotein Carrier Protein (Lola) From Rickettsia Bellii


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of Outer Membrane Lipoprotein Carrier Protein (Lola) From Rickettsia Bellii within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl301

b:81.2
occ:1.00
NE B:ARG199 3.2 89.9 1.0
CB B:PRO73 3.7 75.6 1.0
CG B:PRO73 3.8 70.5 1.0
NH2 B:ARG199 3.8 87.3 1.0
CZ B:ARG199 4.0 86.1 1.0
CB B:PRO76 4.0 84.6 1.0
CD B:ARG199 4.1 85.8 1.0
CA B:PRO73 4.1 80.0 1.0
CA B:PRO76 4.3 78.4 1.0
CA B:PRO74 4.7 87.4 1.0
N B:PRO76 4.7 78.2 1.0
C B:PRO74 4.8 83.9 1.0
OD1 B:ASP92 4.8 77.5 1.0
CD B:PRO73 4.8 71.0 1.0
N B:PRO73 4.8 76.3 1.0
O B:PRO74 5.0 82.8 1.0

Chlorine binding site 4 out of 4 in 8veh

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Chlorine binding site 4 out of 4 in the Crystal Structure of Outer Membrane Lipoprotein Carrier Protein (Lola) From Rickettsia Bellii


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of Outer Membrane Lipoprotein Carrier Protein (Lola) From Rickettsia Bellii within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl302

b:75.8
occ:1.00
OH C:TYR71 3.4 41.8 1.0
CZ C:TYR71 4.0 43.9 1.0
CE2 C:TYR71 4.3 48.9 1.0
NE2 C:GLN47 4.3 53.2 1.0
CG2 C:ILE77 4.9 47.8 1.0
OH B:TYR194 4.9 75.8 1.0
OE1 C:GLN47 4.9 39.4 1.0
CE2 C:PHE75 4.9 54.7 1.0
CD1 C:ILE79 5.0 43.9 1.0

Reference:

S.Lovell, A.Cooper, L.Liu, K.P.Battaile. Crystal Structure of Outer Membrane Lipoprotein Carrier Protein (Lola) From Rickettsia Bellii To Be Published.
Page generated: Tue Jul 30 13:40:41 2024

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