Chlorine in PDB 8vzb: Crystal Structure of 2-Hydroxacyl-Coa Lyase/Synthase Apbhacs From Alphaproteobacteria Bacterium in the Complex with Thdp, D-Lactyl-Coa, and Adp
Enzymatic activity of Crystal Structure of 2-Hydroxacyl-Coa Lyase/Synthase Apbhacs From Alphaproteobacteria Bacterium in the Complex with Thdp, D-Lactyl-Coa, and Adp
All present enzymatic activity of Crystal Structure of 2-Hydroxacyl-Coa Lyase/Synthase Apbhacs From Alphaproteobacteria Bacterium in the Complex with Thdp, D-Lactyl-Coa, and Adp:
4.1.1.8;
4.1.1.8;
Protein crystallography data
The structure of Crystal Structure of 2-Hydroxacyl-Coa Lyase/Synthase Apbhacs From Alphaproteobacteria Bacterium in the Complex with Thdp, D-Lactyl-Coa, and Adp, PDB code: 8vzb
was solved by
P.Gade,
Y.Kim,
M.Endres,
S.Lee,
Y.Yoshikuni,
R.Gonzalez,
K.Michalska,
A.Joachimiak,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 47.27 / 1.98 |
| Space group | P 21 21 21 |
| Cell size a, b, c (Å), α, β, γ (°) | 69.709, 178.005, 196.111, 90, 90, 90 |
| R / Rfree (%) | 17.9 / 21.8 |
Other elements in 8vzb:
The structure of Crystal Structure of 2-Hydroxacyl-Coa Lyase/Synthase Apbhacs From Alphaproteobacteria Bacterium in the Complex with Thdp, D-Lactyl-Coa, and Adp also contains other interesting chemical elements:
| Magnesium | (Mg) | 4 atoms |
Chlorine Binding Sites:
The binding sites of Chlorine atom in the Crystal Structure of 2-Hydroxacyl-Coa Lyase/Synthase Apbhacs From Alphaproteobacteria Bacterium in the Complex with Thdp, D-Lactyl-Coa, and Adp
(pdb code 8vzb). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of 2-Hydroxacyl-Coa Lyase/Synthase Apbhacs From Alphaproteobacteria Bacterium in the Complex with Thdp, D-Lactyl-Coa, and Adp, PDB code: 8vzb:
Jump to Chlorine binding site number: 1; 2;
In total 2 binding sites of Chlorine where determined in the Crystal Structure of 2-Hydroxacyl-Coa Lyase/Synthase Apbhacs From Alphaproteobacteria Bacterium in the Complex with Thdp, D-Lactyl-Coa, and Adp, PDB code: 8vzb:
Jump to Chlorine binding site number: 1; 2;
Chlorine binding site 1 out of 2 in 8vzb
Go back to
Chlorine Binding Sites List in 8vzb
Chlorine binding site 1 out
of 2 in the Crystal Structure of 2-Hydroxacyl-Coa Lyase/Synthase Apbhacs From Alphaproteobacteria Bacterium in the Complex with Thdp, D-Lactyl-Coa, and Adp
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of Crystal Structure of 2-Hydroxacyl-Coa Lyase/Synthase Apbhacs From Alphaproteobacteria Bacterium in the Complex with Thdp, D-Lactyl-Coa, and Adp within 5.0Å range:
|
Chlorine binding site 2 out of 2 in 8vzb
Go back to
Chlorine Binding Sites List in 8vzb
Chlorine binding site 2 out
of 2 in the Crystal Structure of 2-Hydroxacyl-Coa Lyase/Synthase Apbhacs From Alphaproteobacteria Bacterium in the Complex with Thdp, D-Lactyl-Coa, and Adp
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of Crystal Structure of 2-Hydroxacyl-Coa Lyase/Synthase Apbhacs From Alphaproteobacteria Bacterium in the Complex with Thdp, D-Lactyl-Coa, and Adp within 5.0Å range:
|
Reference:
Y.Kim,
S.H.Lee,
P.Gade,
M.Nattermann,
N.Maltseva,
M.Endres,
J.Chen,
P.Wichmann,
Y.Hu,
D.G.Marchal,
Y.Yoshikuni,
T.J.Erb,
R.Gonzalez,
K.Michalska,
A.Joachimiak.
Revealing Reaction Intermediates in One-Carbon Elongation By Thiamine Diphosphate/Coa-Dependent Enzyme Family. Commun Chem V. 7 160 2024.
ISSN: ESSN 2399-3669
PubMed: 39034323
DOI: 10.1038/S42004-024-01242-Y
Page generated: Thu Oct 31 18:06:30 2024
ISSN: ESSN 2399-3669
PubMed: 39034323
DOI: 10.1038/S42004-024-01242-Y
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