Chlorine in PDB 8w2l: TRPM7 Structure in Complex with Anticancer Agent CCT128930 in Closed State
Enzymatic activity of TRPM7 Structure in Complex with Anticancer Agent CCT128930 in Closed State
All present enzymatic activity of TRPM7 Structure in Complex with Anticancer Agent CCT128930 in Closed State:
2.7.11.1;
Other elements in 8w2l:
The structure of TRPM7 Structure in Complex with Anticancer Agent CCT128930 in Closed State also contains other interesting chemical elements:
Chlorine Binding Sites:
The binding sites of Chlorine atom in the TRPM7 Structure in Complex with Anticancer Agent CCT128930 in Closed State
(pdb code 8w2l). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 4 binding sites of Chlorine where determined in the
TRPM7 Structure in Complex with Anticancer Agent CCT128930 in Closed State, PDB code: 8w2l:
Jump to Chlorine binding site number:
1;
2;
3;
4;
Chlorine binding site 1 out
of 4 in 8w2l
Go back to
Chlorine Binding Sites List in 8w2l
Chlorine binding site 1 out
of 4 in the TRPM7 Structure in Complex with Anticancer Agent CCT128930 in Closed State
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of TRPM7 Structure in Complex with Anticancer Agent CCT128930 in Closed State within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl1312
b:36.5
occ:1.00
|
CL1
|
A:M051312
|
0.0
|
36.5
|
1.0
|
C12
|
A:M051312
|
1.7
|
36.5
|
1.0
|
C11
|
A:M051312
|
2.7
|
36.5
|
1.0
|
C14
|
A:M051312
|
2.7
|
36.5
|
1.0
|
CD2
|
A:PHE1118
|
3.5
|
22.2
|
1.0
|
CG
|
A:PHE1118
|
3.7
|
22.2
|
1.0
|
CG
|
A:ARG1115
|
3.8
|
23.9
|
1.0
|
CA
|
A:VAL982
|
3.9
|
23.4
|
1.0
|
CB
|
A:PHE1118
|
4.0
|
22.2
|
1.0
|
C15
|
A:M051312
|
4.0
|
36.5
|
1.0
|
C10
|
A:M051312
|
4.0
|
36.5
|
1.0
|
CE2
|
A:PHE1118
|
4.0
|
22.2
|
1.0
|
CA
|
A:ARG1115
|
4.0
|
23.9
|
1.0
|
NE1
|
A:TRP1111
|
4.1
|
36.5
|
1.0
|
O
|
A:ALA981
|
4.2
|
22.0
|
1.0
|
CB
|
A:ARG1115
|
4.3
|
23.9
|
1.0
|
CZ2
|
A:TRP1111
|
4.4
|
36.5
|
1.0
|
CG2
|
A:VAL982
|
4.4
|
23.4
|
1.0
|
CE2
|
A:TRP1111
|
4.4
|
36.5
|
1.0
|
CD1
|
A:PHE1118
|
4.4
|
22.2
|
1.0
|
C9
|
A:M051312
|
4.5
|
36.5
|
1.0
|
CB
|
A:VAL982
|
4.6
|
23.4
|
1.0
|
O
|
A:VAL982
|
4.6
|
23.4
|
1.0
|
N
|
A:VAL982
|
4.6
|
23.4
|
1.0
|
CZ
|
A:PHE1118
|
4.7
|
22.2
|
1.0
|
N
|
A:ARG1115
|
4.7
|
23.9
|
1.0
|
C
|
A:VAL982
|
4.7
|
23.4
|
1.0
|
C
|
A:ALA981
|
4.7
|
22.0
|
1.0
|
CG1
|
A:VAL982
|
4.7
|
23.4
|
1.0
|
CD
|
A:ARG1115
|
4.8
|
23.9
|
1.0
|
CE1
|
A:PHE1118
|
4.9
|
22.2
|
1.0
|
O
|
A:GLN1114
|
4.9
|
23.8
|
1.0
|
NE
|
A:ARG1115
|
5.0
|
23.9
|
1.0
|
|
Chlorine binding site 2 out
of 4 in 8w2l
Go back to
Chlorine Binding Sites List in 8w2l
Chlorine binding site 2 out
of 4 in the TRPM7 Structure in Complex with Anticancer Agent CCT128930 in Closed State
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of TRPM7 Structure in Complex with Anticancer Agent CCT128930 in Closed State within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl1314
b:31.6
occ:1.00
|
CL1
|
B:M051314
|
0.0
|
31.6
|
1.0
|
C12
|
B:M051314
|
1.7
|
31.6
|
1.0
|
C14
|
B:M051314
|
2.7
|
31.6
|
1.0
|
C11
|
B:M051314
|
2.7
|
31.6
|
1.0
|
CD2
|
B:PHE1118
|
3.4
|
32.4
|
1.0
|
CG
|
B:PHE1118
|
3.6
|
32.4
|
1.0
|
CG
|
B:ARG1115
|
3.7
|
30.7
|
1.0
|
CB
|
B:PHE1118
|
3.8
|
32.4
|
1.0
|
CA
|
B:ARG1115
|
3.9
|
30.7
|
1.0
|
CE2
|
B:PHE1118
|
3.9
|
32.4
|
1.0
|
C10
|
B:M051314
|
4.0
|
31.6
|
1.0
|
C15
|
B:M051314
|
4.0
|
31.6
|
1.0
|
CA
|
B:VAL982
|
4.1
|
30.1
|
1.0
|
CB
|
B:ARG1115
|
4.2
|
30.7
|
1.0
|
NE1
|
B:TRP1111
|
4.2
|
25.6
|
1.0
|
O
|
B:ALA981
|
4.3
|
27.1
|
1.0
|
CD1
|
B:PHE1118
|
4.4
|
32.4
|
1.0
|
CZ2
|
B:TRP1111
|
4.5
|
25.6
|
1.0
|
CG2
|
B:VAL982
|
4.5
|
30.1
|
1.0
|
C9
|
B:M051314
|
4.5
|
31.6
|
1.0
|
CE2
|
B:TRP1111
|
4.5
|
25.6
|
1.0
|
N
|
B:ARG1115
|
4.5
|
30.7
|
1.0
|
CZ
|
B:PHE1118
|
4.6
|
32.4
|
1.0
|
CB
|
B:VAL982
|
4.7
|
30.1
|
1.0
|
O
|
B:VAL982
|
4.7
|
30.1
|
1.0
|
N
|
B:VAL982
|
4.8
|
30.1
|
1.0
|
O
|
B:GLN1114
|
4.8
|
29.7
|
1.0
|
CD
|
B:ARG1115
|
4.8
|
30.7
|
1.0
|
CE1
|
B:PHE1118
|
4.8
|
32.4
|
1.0
|
CG1
|
B:VAL982
|
4.8
|
30.1
|
1.0
|
C
|
B:VAL982
|
4.9
|
30.1
|
1.0
|
C
|
B:ALA981
|
4.9
|
27.1
|
1.0
|
O
|
B:ARG1115
|
4.9
|
30.7
|
1.0
|
C
|
B:ARG1115
|
4.9
|
30.7
|
1.0
|
NE
|
B:ARG1115
|
5.0
|
30.7
|
1.0
|
C
|
B:GLN1114
|
5.0
|
29.7
|
1.0
|
|
Chlorine binding site 3 out
of 4 in 8w2l
Go back to
Chlorine Binding Sites List in 8w2l
Chlorine binding site 3 out
of 4 in the TRPM7 Structure in Complex with Anticancer Agent CCT128930 in Closed State
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 3 of TRPM7 Structure in Complex with Anticancer Agent CCT128930 in Closed State within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Cl1314
b:34.5
occ:1.00
|
CL1
|
C:M051314
|
0.0
|
34.5
|
1.0
|
C12
|
C:M051314
|
1.7
|
34.5
|
1.0
|
C14
|
C:M051314
|
2.7
|
34.5
|
1.0
|
C11
|
C:M051314
|
2.7
|
34.5
|
1.0
|
CD2
|
C:PHE1118
|
3.3
|
20.1
|
1.0
|
CG
|
C:PHE1118
|
3.6
|
20.1
|
1.0
|
CG
|
C:ARG1115
|
3.7
|
21.2
|
1.0
|
CB
|
C:PHE1118
|
3.8
|
20.1
|
1.0
|
CA
|
C:ARG1115
|
3.9
|
21.2
|
1.0
|
CE2
|
C:PHE1118
|
3.9
|
20.1
|
1.0
|
C15
|
C:M051314
|
4.0
|
34.5
|
1.0
|
C10
|
C:M051314
|
4.0
|
34.5
|
1.0
|
CA
|
C:VAL982
|
4.1
|
20.1
|
1.0
|
CB
|
C:ARG1115
|
4.2
|
21.2
|
1.0
|
NE1
|
C:TRP1111
|
4.3
|
34.5
|
1.0
|
CD1
|
C:PHE1118
|
4.3
|
20.1
|
1.0
|
O
|
C:ALA981
|
4.4
|
19.4
|
1.0
|
CG2
|
C:VAL982
|
4.5
|
20.1
|
1.0
|
CZ2
|
C:TRP1111
|
4.5
|
34.5
|
1.0
|
C9
|
C:M051314
|
4.5
|
34.5
|
1.0
|
N
|
C:ARG1115
|
4.5
|
21.2
|
1.0
|
CE2
|
C:TRP1111
|
4.6
|
34.5
|
1.0
|
CZ
|
C:PHE1118
|
4.6
|
20.1
|
1.0
|
CB
|
C:VAL982
|
4.7
|
20.1
|
1.0
|
O
|
C:VAL982
|
4.7
|
20.1
|
1.0
|
O
|
C:GLN1114
|
4.8
|
19.8
|
1.0
|
N
|
C:VAL982
|
4.8
|
20.1
|
1.0
|
CD
|
C:ARG1115
|
4.8
|
21.2
|
1.0
|
CE1
|
C:PHE1118
|
4.8
|
20.1
|
1.0
|
CG1
|
C:VAL982
|
4.8
|
20.1
|
1.0
|
C
|
C:VAL982
|
4.9
|
20.1
|
1.0
|
O
|
C:ARG1115
|
4.9
|
21.2
|
1.0
|
C
|
C:ARG1115
|
4.9
|
21.2
|
1.0
|
C
|
C:ALA981
|
4.9
|
19.4
|
1.0
|
NE
|
C:ARG1115
|
4.9
|
21.2
|
1.0
|
C
|
C:GLN1114
|
5.0
|
19.8
|
1.0
|
|
Chlorine binding site 4 out
of 4 in 8w2l
Go back to
Chlorine Binding Sites List in 8w2l
Chlorine binding site 4 out
of 4 in the TRPM7 Structure in Complex with Anticancer Agent CCT128930 in Closed State
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 4 of TRPM7 Structure in Complex with Anticancer Agent CCT128930 in Closed State within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Cl1316
b:34.4
occ:1.00
|
CL1
|
D:M051316
|
0.0
|
34.4
|
1.0
|
C12
|
D:M051316
|
1.7
|
34.4
|
1.0
|
C14
|
D:M051316
|
2.7
|
34.4
|
1.0
|
C11
|
D:M051316
|
2.7
|
34.4
|
1.0
|
CD2
|
D:PHE1118
|
3.4
|
18.5
|
1.0
|
CG
|
D:PHE1118
|
3.6
|
18.5
|
1.0
|
CG
|
D:ARG1115
|
3.7
|
20.3
|
1.0
|
CB
|
D:PHE1118
|
3.8
|
18.5
|
1.0
|
CA
|
D:ARG1115
|
3.9
|
20.3
|
1.0
|
CE2
|
D:PHE1118
|
3.9
|
18.5
|
1.0
|
C10
|
D:M051316
|
4.0
|
34.4
|
1.0
|
C15
|
D:M051316
|
4.0
|
34.4
|
1.0
|
CA
|
D:VAL982
|
4.1
|
17.9
|
1.0
|
CB
|
D:ARG1115
|
4.2
|
20.3
|
1.0
|
NE1
|
D:TRP1111
|
4.3
|
34.4
|
1.0
|
O
|
D:ALA981
|
4.3
|
16.8
|
1.0
|
CD1
|
D:PHE1118
|
4.4
|
18.5
|
1.0
|
CZ2
|
D:TRP1111
|
4.5
|
34.4
|
1.0
|
CG2
|
D:VAL982
|
4.5
|
17.9
|
1.0
|
C9
|
D:M051316
|
4.5
|
34.4
|
1.0
|
N
|
D:ARG1115
|
4.5
|
20.3
|
1.0
|
CE2
|
D:TRP1111
|
4.5
|
34.4
|
1.0
|
CZ
|
D:PHE1118
|
4.6
|
18.5
|
1.0
|
CB
|
D:VAL982
|
4.7
|
17.9
|
1.0
|
O
|
D:VAL982
|
4.7
|
17.9
|
1.0
|
N
|
D:VAL982
|
4.8
|
17.9
|
1.0
|
O
|
D:GLN1114
|
4.8
|
18.0
|
1.0
|
CD
|
D:ARG1115
|
4.8
|
20.3
|
1.0
|
CG1
|
D:VAL982
|
4.8
|
17.9
|
1.0
|
CE1
|
D:PHE1118
|
4.8
|
18.5
|
1.0
|
C
|
D:VAL982
|
4.9
|
17.9
|
1.0
|
C
|
D:ALA981
|
4.9
|
16.8
|
1.0
|
O
|
D:ARG1115
|
4.9
|
20.3
|
1.0
|
C
|
D:ARG1115
|
4.9
|
20.3
|
1.0
|
NE
|
D:ARG1115
|
4.9
|
20.3
|
1.0
|
|
Reference:
K.D.Nadezhdin,
A.I.Sobolevsky.
Structural Basis of Selective TRPM7 Inhibition By the Anticancer Agent CCT128930 To Be Published.
Page generated: Tue Jul 30 13:46:54 2024
|