Chlorine in PDB 8wq3: Crystal Structure of the C-Terminal Rrm Domain of An Rbp

The structure of Crystal Structure of the C-Terminal Rrm Domain of An Rbp, PDB code: 8wq3 was solved by X.Chen, M.Jiang, Z.Yang, X.Chen, Q.Wei, S.Guo, M.Wang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	35.49 / 2.41
Space group	C 2 2 21
Cell size a, b, c (Å), α, β, γ (°)	71.261, 74.602, 195.843, 90, 90, 90
R / Rfree (%)	18.3 / 22.1

The binding sites of Chlorine atom in the Crystal Structure of the C-Terminal Rrm Domain of An Rbp (pdb code 8wq3). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of the C-Terminal Rrm Domain of An Rbp, PDB code: 8wq3:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in the Crystal Structure of the C-Terminal Rrm Domain of An Rbp


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of the C-Terminal Rrm Domain of An Rbp within 5.0Å range: probe atom residue distance (Å) B Occ D:Cl501 b:64.1 occ:1.00 N D:ASN428 3.2 44.0 1.0 O C:HOH538 3.3 53.2 1.0 CB D:LYS427 3.4 49.5 1.0 CD D:LYS427 3.5 53.1 1.0 O C:HOH507 3.7 51.3 1.0 CB C:LYS427 3.8 44.4 1.0 N C:ASN428 3.8 43.2 1.0 O D:HOH622 3.8 48.6 1.0 CA D:LYS427 3.8 49.1 1.0 CB D:ASN428 3.9 47.4 1.0 C D:LYS427 4.0 49.9 1.0 CD C:LYS427 4.0 46.2 1.0 CG D:LYS427 4.0 48.5 1.0 CA D:ASN428 4.1 45.5 1.0 CA C:LYS427 4.3 52.6 1.0 CG C:LYS427 4.3 40.0 1.0 CB C:ASN428 4.4 46.6 1.0 C C:LYS427 4.6 51.3 1.0 CG D:ASN428 4.6 50.5 1.0 CA C:ASN428 4.7 41.9 1.0 C D:ASN428 4.7 42.1 1.0 CG C:ASN428 4.8 54.9 1.0 CE D:LYS427 4.9 50.1 1.0 ND2 C:ASN428 4.9 54.6 1.0 OD1 D:ASN428 4.9 52.7 1.0 CG2 D:VAL429 5.0 34.5 1.0

Chlorine binding site 2 out of 2 in the Crystal Structure of the C-Terminal Rrm Domain of An Rbp


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of the C-Terminal Rrm Domain of An Rbp within 5.0Å range: probe atom residue distance (Å) B Occ D:Cl502 b:52.8 occ:1.00 OD1 D:ASP410 3.9 38.1 1.0 CG1 D:ILE411 4.1 30.8 1.0 CD1 D:LEU377 4.4 48.0 1.0 CD2 D:LEU452 4.5 29.8 1.0 NH2 D:ARG414 4.6 33.5 1.0 CG D:ASP410 4.7 39.1 1.0 CD1 D:ILE411 4.8 26.5 1.0 NE D:ARG414 4.8 39.8 1.0 CZ D:ARG414 4.9 36.4 1.0

X.Chen, Q.Wei, Z.Yang, X.Chen, S.Guo, M.Jiang, M.Wang. Structural Basis For Rna Recognition By the C-Terminal Rrm Domain of Human RBM45. J.Biol.Chem. 07640 2024.
ISSN: ESSN 1083-351X
PubMed: 39122006
DOI: 10.1016/J.JBC.2024.107640