Chlorine in PDB 8y95: Structure of Net-Ne in Occluded State

The structure of Structure of Net-Ne in Occluded State also contains other interesting chemical elements:

Sodium

(Na)

2 atoms

The binding sites of Chlorine atom in the Structure of Net-Ne in Occluded State (pdb code 8y95). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Structure of Net-Ne in Occluded State, PDB code: 8y95:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in the Structure of Net-Ne in Occluded State


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of Net-Ne in Occluded State within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl702 b:30.0 occ:1.00 OH A:TYR98 2.2 95.4 1.0 OG A:SER318 2.6 92.2 1.0 ND2 A:ASN78 2.8 93.2 1.0 NE2 A:GLN314 3.1 91.0 1.0 CB A:SER318 3.3 92.2 1.0 CZ A:TYR98 3.3 95.4 1.0 CE2 A:TYR98 3.8 95.4 1.0 CG A:GLN314 3.9 91.0 1.0 CG A:ASN78 3.9 93.2 1.0 CD A:GLN314 3.9 91.0 1.0 O A:GLN314 4.1 91.0 1.0 CB A:SER354 4.2 96.1 1.0 CD1 A:ILE315 4.4 92.1 1.0 OD1 A:ASN78 4.4 93.2 1.0 NA A:NA703 4.5 30.0 1.0 CD1 A:PHE82 4.5 93.6 1.0 CE1 A:TYR98 4.5 95.4 1.0 C A:GLN314 4.6 91.0 1.0 OG A:SER354 4.7 96.1 1.0 CA A:ILE315 4.7 92.1 1.0 CA A:SER318 4.8 92.2 1.0 O A:ASN350 4.9 96.9 1.0 CB A:ASN78 4.9 93.2 1.0 N A:ILE315 4.9 92.1 1.0

Chlorine binding site 2 out of 2 in the Structure of Net-Ne in Occluded State


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Structure of Net-Ne in Occluded State within 5.0Å range: probe atom residue distance (Å) B Occ D:Cl702 b:30.0 occ:1.00 OH D:TYR98 2.1 95.4 1.0 OG D:SER318 2.5 92.2 1.0 ND2 D:ASN78 3.1 93.2 1.0 NE2 D:GLN314 3.2 91.0 1.0 CZ D:TYR98 3.3 95.4 1.0 CB D:SER318 3.3 92.2 1.0 CE2 D:TYR98 3.6 95.4 1.0 CG D:GLN314 3.9 91.0 1.0 O D:GLN314 3.9 91.0 1.0 CD D:GLN314 4.0 91.0 1.0 CD1 D:ILE315 4.1 92.1 1.0 CG D:ASN78 4.1 93.2 1.0 CB D:SER354 4.5 96.1 1.0 C D:GLN314 4.5 91.0 1.0 CE1 D:TYR98 4.5 95.4 1.0 CA D:ILE315 4.5 92.1 1.0 OD1 D:ASN78 4.5 93.2 1.0 CD1 D:PHE82 4.7 93.6 1.0 N D:ILE315 4.7 92.1 1.0 CA D:SER318 4.7 92.2 1.0 OG D:SER354 4.8 96.1 1.0 O D:ASN350 5.0 96.9 1.0 CG1 D:ILE315 5.0 92.1 1.0

H.Zhang, Y.L.Yin, A.Dai, T.Zhang, C.Zhang, C.Wu, W.Hu, X.He, B.Pan, S.Jin, Q.Yuan, M.W.Wang, D.Yang, H.E.Xu, Y.Jiang. Dimerization and Antidepressant Recognition at Noradrenaline Transporter Nature 2024.
ISSN: ESSN 1476-4687
DOI: 10.1038/S41586-024-07437-6