Chlorine in PDB 9bcq: Extracellular Domain of Gc-A Bound to Anp
Enzymatic activity of Extracellular Domain of Gc-A Bound to Anp
All present enzymatic activity of Extracellular Domain of Gc-A Bound to Anp:
4.6.1.2;
Chlorine Binding Sites:
The binding sites of Chlorine atom in the Extracellular Domain of Gc-A Bound to Anp
(pdb code 9bcq). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the
Extracellular Domain of Gc-A Bound to Anp, PDB code: 9bcq:
Jump to Chlorine binding site number:
1;
2;
Chlorine binding site 1 out
of 2 in 9bcq
Go back to
Chlorine Binding Sites List in 9bcq
Chlorine binding site 1 out
of 2 in the Extracellular Domain of Gc-A Bound to Anp
![](/pictures/CL/pdb/bc/9bcq-CL-sphere_01.jpg) Mono view
![](/pictures/CL/pdb/bc/9bcq-CL-sphere_01_stereo.jpg) Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of Extracellular Domain of Gc-A Bound to Anp within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl1101
b:29.1
occ:1.00
|
HG
|
A:SER53
|
2.1
|
26.4
|
1.0
|
H
|
A:GLY85
|
2.5
|
24.6
|
1.0
|
HD3
|
A:PRO10
|
2.6
|
25.7
|
1.0
|
OG
|
A:SER53
|
2.9
|
26.4
|
1.0
|
HB3
|
A:PRO84
|
2.9
|
24.1
|
1.0
|
H
|
A:CYS86
|
3.0
|
27.9
|
1.0
|
HA
|
A:PRO84
|
3.3
|
24.1
|
1.0
|
HA
|
A:LEU9
|
3.3
|
25.3
|
1.0
|
HB2
|
A:CYS60
|
3.4
|
28.0
|
1.0
|
N
|
A:GLY85
|
3.4
|
24.6
|
1.0
|
HG3
|
A:PRO10
|
3.5
|
25.7
|
1.0
|
CD
|
A:PRO10
|
3.6
|
25.7
|
1.0
|
HB2
|
A:SER53
|
3.7
|
26.4
|
1.0
|
HD1
|
A:TRP18
|
3.7
|
25.8
|
1.0
|
HD23
|
A:LEU9
|
3.7
|
25.3
|
1.0
|
CB
|
A:PRO84
|
3.7
|
24.1
|
1.0
|
CB
|
A:SER53
|
3.8
|
26.4
|
1.0
|
CA
|
A:PRO84
|
3.8
|
24.1
|
1.0
|
HB2
|
A:CYS86
|
3.8
|
27.9
|
1.0
|
N
|
A:CYS86
|
3.8
|
27.9
|
1.0
|
HE1
|
A:TRP18
|
3.9
|
25.8
|
1.0
|
HB3
|
A:ALA89
|
3.9
|
25.1
|
1.0
|
CG
|
A:PRO10
|
4.0
|
25.7
|
1.0
|
HB3
|
A:CYS60
|
4.0
|
28.0
|
1.0
|
HB3
|
A:SER53
|
4.0
|
26.4
|
1.0
|
SG
|
A:CYS86
|
4.1
|
27.9
|
1.0
|
O
|
A:VAL8
|
4.1
|
24.8
|
1.0
|
CB
|
A:CYS60
|
4.1
|
28.0
|
1.0
|
C
|
A:PRO84
|
4.1
|
24.1
|
1.0
|
CD1
|
A:TRP18
|
4.2
|
25.8
|
1.0
|
CA
|
A:LEU9
|
4.2
|
25.3
|
1.0
|
HB2
|
A:PRO84
|
4.2
|
24.1
|
1.0
|
HD2
|
A:PRO10
|
4.2
|
25.7
|
1.0
|
NE1
|
A:TRP18
|
4.3
|
25.8
|
1.0
|
N
|
A:PRO10
|
4.3
|
25.7
|
1.0
|
CA
|
A:GLY85
|
4.3
|
24.6
|
1.0
|
HB1
|
A:ALA89
|
4.3
|
25.1
|
1.0
|
HG2
|
A:PRO10
|
4.3
|
25.7
|
1.0
|
CB
|
A:CYS86
|
4.4
|
27.9
|
1.0
|
HA3
|
A:GLY85
|
4.4
|
24.6
|
1.0
|
CB
|
A:ALA89
|
4.5
|
25.1
|
1.0
|
C
|
A:LEU9
|
4.6
|
25.3
|
1.0
|
CD2
|
A:LEU9
|
4.6
|
25.3
|
1.0
|
HD22
|
A:LEU9
|
4.6
|
25.3
|
1.0
|
C
|
A:GLY85
|
4.6
|
24.6
|
1.0
|
HB2
|
A:ALA89
|
4.6
|
25.1
|
1.0
|
HG3
|
A:PRO84
|
4.7
|
24.1
|
1.0
|
CA
|
A:CYS86
|
4.7
|
27.9
|
1.0
|
HG12
|
A:VAL8
|
4.8
|
24.8
|
1.0
|
O
|
A:SER53
|
4.8
|
26.4
|
1.0
|
CG
|
A:PRO84
|
4.8
|
24.1
|
1.0
|
C
|
A:VAL8
|
4.8
|
24.8
|
1.0
|
N
|
A:LEU9
|
4.9
|
25.3
|
1.0
|
SG
|
A:CYS60
|
4.9
|
28.0
|
1.0
|
|
Chlorine binding site 2 out
of 2 in 9bcq
Go back to
Chlorine Binding Sites List in 9bcq
Chlorine binding site 2 out
of 2 in the Extracellular Domain of Gc-A Bound to Anp
![](/pictures/CL/pdb/bc/9bcq-CL-sphere_02.jpg) Mono view
![](/pictures/CL/pdb/bc/9bcq-CL-sphere_02_stereo.jpg) Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of Extracellular Domain of Gc-A Bound to Anp within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl1101
b:29.3
occ:1.00
|
HG
|
B:SER53
|
1.9
|
26.5
|
1.0
|
OG
|
B:SER53
|
2.7
|
26.5
|
1.0
|
HD3
|
B:PRO10
|
2.7
|
26.5
|
1.0
|
H
|
B:GLY85
|
2.7
|
26.7
|
1.0
|
HB3
|
B:PRO84
|
3.0
|
26.1
|
1.0
|
H
|
B:CYS86
|
3.0
|
29.2
|
1.0
|
HG3
|
B:PRO10
|
3.2
|
26.5
|
1.0
|
SG
|
B:CYS60
|
3.3
|
31.7
|
1.0
|
HA
|
B:LEU9
|
3.3
|
26.0
|
1.0
|
HA
|
B:PRO84
|
3.5
|
26.1
|
1.0
|
CD
|
B:PRO10
|
3.5
|
26.5
|
1.0
|
N
|
B:GLY85
|
3.5
|
26.7
|
1.0
|
HB2
|
B:CYS86
|
3.7
|
29.2
|
1.0
|
CB
|
B:SER53
|
3.7
|
26.5
|
1.0
|
CB
|
B:PRO84
|
3.8
|
26.1
|
1.0
|
CG
|
B:PRO10
|
3.8
|
26.5
|
1.0
|
HB2
|
B:SER53
|
3.8
|
26.5
|
1.0
|
HD1
|
B:TRP18
|
3.8
|
27.7
|
1.0
|
HB3
|
B:SER53
|
3.9
|
26.5
|
1.0
|
HD23
|
B:LEU9
|
3.9
|
26.0
|
1.0
|
N
|
B:CYS86
|
3.9
|
29.2
|
1.0
|
CA
|
B:PRO84
|
4.0
|
26.1
|
1.0
|
HB3
|
B:ALA89
|
4.0
|
26.4
|
1.0
|
HB2
|
B:PRO84
|
4.1
|
26.1
|
1.0
|
SG
|
B:CYS86
|
4.1
|
29.2
|
1.0
|
HE1
|
B:TRP18
|
4.1
|
27.7
|
1.0
|
HG2
|
B:PRO10
|
4.2
|
26.5
|
1.0
|
CA
|
B:LEU9
|
4.2
|
26.0
|
1.0
|
N
|
B:PRO10
|
4.2
|
26.5
|
1.0
|
HD2
|
B:PRO10
|
4.2
|
26.5
|
1.0
|
CB
|
B:CYS86
|
4.3
|
29.2
|
1.0
|
C
|
B:PRO84
|
4.3
|
26.1
|
1.0
|
O
|
B:VAL8
|
4.4
|
25.7
|
1.0
|
CD1
|
B:TRP18
|
4.4
|
27.7
|
1.0
|
HB1
|
B:ALA89
|
4.5
|
26.4
|
1.0
|
CA
|
B:GLY85
|
4.5
|
26.7
|
1.0
|
C
|
B:LEU9
|
4.5
|
26.0
|
1.0
|
HA3
|
B:GLY85
|
4.5
|
26.7
|
1.0
|
NE1
|
B:TRP18
|
4.5
|
27.7
|
1.0
|
CB
|
B:ALA89
|
4.6
|
26.4
|
1.0
|
O
|
B:SER53
|
4.6
|
26.5
|
1.0
|
CB
|
B:CYS60
|
4.7
|
31.7
|
1.0
|
C
|
B:GLY85
|
4.7
|
26.7
|
1.0
|
HA
|
B:CYS60
|
4.7
|
31.7
|
1.0
|
HB3
|
B:CYS60
|
4.7
|
31.7
|
1.0
|
CA
|
B:CYS86
|
4.7
|
29.2
|
1.0
|
HB2
|
B:ALA89
|
4.8
|
26.4
|
1.0
|
CD2
|
B:LEU9
|
4.8
|
26.0
|
1.0
|
HG12
|
B:VAL8
|
4.9
|
25.7
|
1.0
|
HG3
|
B:PRO84
|
4.9
|
26.1
|
1.0
|
CG
|
B:PRO84
|
5.0
|
26.1
|
1.0
|
|
Reference:
S.Liu,
A.M.Payne,
J.Wang,
L.Zhu,
N.Paknejad,
E.T.Eng,
W.Liu,
Y.Miao,
R.K.Hite,
X.Y.Huang.
Architecture and Activation of Single-Pass Transmembrane Receptor Guanylyl Cyclase. Nat.Struct.Mol.Biol. 2024.
ISSN: ESSN 1545-9985
PubMed: 39543315
DOI: 10.1038/S41594-024-01426-Z
Page generated: Tue Dec 10 19:29:05 2024
|