Chlorine in PDB 9c6r: Blood Cell-Specific Tubulin in Complex with Cryptophycin-52
Chlorine Binding Sites:
The binding sites of Chlorine atom in the Blood Cell-Specific Tubulin in Complex with Cryptophycin-52
(pdb code 9c6r). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 8 binding sites of Chlorine where determined in the
Blood Cell-Specific Tubulin in Complex with Cryptophycin-52, PDB code: 9c6r:
Jump to Chlorine binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
Chlorine binding site 1 out
of 8 in 9c6r
Go back to
Chlorine Binding Sites List in 9c6r
Chlorine binding site 1 out
of 8 in the Blood Cell-Specific Tubulin in Complex with Cryptophycin-52
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of Blood Cell-Specific Tubulin in Complex with Cryptophycin-52 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl1201
b:68.9
occ:1.00
|
CL1
|
B:YGY1201
|
0.0
|
68.9
|
1.0
|
C31
|
B:YGY1201
|
1.8
|
44.8
|
1.0
|
C32
|
B:YGY1201
|
2.7
|
41.7
|
1.0
|
C30
|
B:YGY1201
|
2.8
|
37.8
|
1.0
|
O8
|
B:YGY1201
|
2.9
|
46.7
|
1.0
|
CZ
|
B:PHE394
|
3.4
|
36.8
|
1.0
|
C
|
A:LEU259
|
3.6
|
38.6
|
1.0
|
CD
|
A:PRO261
|
3.6
|
38.6
|
1.0
|
N
|
A:VAL260
|
3.7
|
37.9
|
1.0
|
N
|
A:PRO261
|
3.7
|
36.6
|
1.0
|
O
|
A:LEU259
|
3.8
|
37.6
|
1.0
|
CE2
|
B:PHE394
|
3.9
|
46.9
|
1.0
|
C
|
A:VAL260
|
3.9
|
42.0
|
1.0
|
CB
|
A:PRO261
|
4.0
|
36.5
|
1.0
|
O
|
A:THR257
|
4.0
|
41.6
|
1.0
|
O
|
A:ASN258
|
4.0
|
56.1
|
1.0
|
CA
|
A:LEU259
|
4.0
|
39.0
|
1.0
|
C33
|
B:YGY1201
|
4.0
|
44.9
|
1.0
|
CG
|
A:PRO261
|
4.0
|
35.9
|
1.0
|
C29
|
B:YGY1201
|
4.1
|
46.7
|
1.0
|
C35
|
B:YGY1201
|
4.1
|
52.2
|
1.0
|
CA
|
A:PRO261
|
4.2
|
38.6
|
1.0
|
N
|
A:LEU259
|
4.2
|
36.4
|
1.0
|
C
|
A:ASN258
|
4.2
|
50.0
|
1.0
|
CA
|
A:VAL260
|
4.3
|
31.3
|
1.0
|
O
|
A:VAL260
|
4.4
|
50.9
|
1.0
|
CE1
|
B:PHE394
|
4.5
|
37.2
|
1.0
|
C34
|
B:YGY1201
|
4.6
|
51.2
|
1.0
|
CB
|
A:ALA314
|
4.7
|
62.2
|
1.0
|
C
|
A:THR257
|
5.0
|
43.1
|
1.0
|
O
|
A:MET313
|
5.0
|
58.4
|
1.0
|
|
Chlorine binding site 2 out
of 8 in 9c6r
Go back to
Chlorine Binding Sites List in 9c6r
Chlorine binding site 2 out
of 8 in the Blood Cell-Specific Tubulin in Complex with Cryptophycin-52
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of Blood Cell-Specific Tubulin in Complex with Cryptophycin-52 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
G:Cl1201
b:77.9
occ:1.00
|
CL1
|
G:YGY1201
|
0.0
|
77.9
|
1.0
|
C31
|
G:YGY1201
|
1.8
|
39.7
|
1.0
|
C32
|
G:YGY1201
|
2.7
|
42.3
|
1.0
|
C30
|
G:YGY1201
|
2.8
|
36.9
|
1.0
|
O8
|
G:YGY1201
|
2.9
|
41.0
|
1.0
|
CZ
|
G:PHE394
|
3.4
|
35.7
|
1.0
|
C
|
F:LEU259
|
3.5
|
42.3
|
1.0
|
CD
|
F:PRO261
|
3.6
|
33.7
|
1.0
|
N
|
F:VAL260
|
3.6
|
41.5
|
1.0
|
N
|
F:PRO261
|
3.7
|
30.4
|
1.0
|
O
|
F:LEU259
|
3.7
|
47.8
|
1.0
|
CE2
|
G:PHE394
|
3.8
|
42.6
|
1.0
|
C
|
F:VAL260
|
3.9
|
41.6
|
1.0
|
O
|
F:THR257
|
4.0
|
49.6
|
1.0
|
CB
|
F:PRO261
|
4.0
|
34.7
|
1.0
|
CA
|
F:LEU259
|
4.0
|
40.3
|
1.0
|
C33
|
G:YGY1201
|
4.0
|
54.9
|
1.0
|
CG
|
F:PRO261
|
4.1
|
32.4
|
1.0
|
C29
|
G:YGY1201
|
4.1
|
55.0
|
1.0
|
O
|
F:ASN258
|
4.1
|
64.7
|
1.0
|
C35
|
G:YGY1201
|
4.1
|
55.1
|
1.0
|
CA
|
F:PRO261
|
4.1
|
35.6
|
1.0
|
N
|
F:LEU259
|
4.2
|
43.6
|
1.0
|
C
|
F:ASN258
|
4.3
|
57.9
|
1.0
|
CA
|
F:VAL260
|
4.3
|
39.4
|
1.0
|
O
|
F:VAL260
|
4.4
|
48.8
|
1.0
|
CE1
|
G:PHE394
|
4.5
|
36.5
|
1.0
|
C34
|
G:YGY1201
|
4.6
|
60.0
|
1.0
|
CB
|
F:ALA314
|
4.7
|
62.8
|
1.0
|
C
|
F:THR257
|
5.0
|
47.8
|
1.0
|
|
Chlorine binding site 3 out
of 8 in 9c6r
Go back to
Chlorine Binding Sites List in 9c6r
Chlorine binding site 3 out
of 8 in the Blood Cell-Specific Tubulin in Complex with Cryptophycin-52
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 3 of Blood Cell-Specific Tubulin in Complex with Cryptophycin-52 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
L:Cl1201
b:71.5
occ:1.00
|
CL1
|
L:YGY1201
|
0.0
|
71.5
|
1.0
|
C31
|
L:YGY1201
|
1.8
|
47.6
|
1.0
|
C32
|
L:YGY1201
|
2.7
|
44.1
|
1.0
|
C30
|
L:YGY1201
|
2.8
|
40.3
|
1.0
|
O8
|
L:YGY1201
|
2.9
|
49.8
|
1.0
|
CZ
|
L:PHE394
|
3.4
|
36.9
|
1.0
|
C
|
K:LEU259
|
3.6
|
41.3
|
1.0
|
CD
|
K:PRO261
|
3.6
|
40.1
|
1.0
|
N
|
K:VAL260
|
3.7
|
40.9
|
1.0
|
N
|
K:PRO261
|
3.7
|
38.1
|
1.0
|
O
|
K:LEU259
|
3.8
|
39.9
|
1.0
|
CE2
|
L:PHE394
|
3.9
|
47.7
|
1.0
|
C
|
K:VAL260
|
3.9
|
43.7
|
1.0
|
CB
|
K:PRO261
|
4.0
|
38.5
|
1.0
|
O
|
K:THR257
|
4.0
|
45.4
|
1.0
|
CA
|
K:LEU259
|
4.0
|
41.5
|
1.0
|
CG
|
K:PRO261
|
4.0
|
36.8
|
1.0
|
C33
|
L:YGY1201
|
4.0
|
46.5
|
1.0
|
O
|
K:ASN258
|
4.0
|
57.3
|
1.0
|
C29
|
L:YGY1201
|
4.1
|
48.7
|
1.0
|
C35
|
L:YGY1201
|
4.1
|
54.6
|
1.0
|
CA
|
K:PRO261
|
4.1
|
40.6
|
1.0
|
N
|
K:LEU259
|
4.2
|
38.0
|
1.0
|
C
|
K:ASN258
|
4.2
|
51.5
|
1.0
|
CA
|
K:VAL260
|
4.3
|
33.8
|
1.0
|
O
|
K:VAL260
|
4.4
|
52.2
|
1.0
|
CE1
|
L:PHE394
|
4.5
|
38.1
|
1.0
|
C34
|
L:YGY1201
|
4.6
|
52.8
|
1.0
|
CB
|
K:ALA314
|
4.7
|
63.7
|
1.0
|
O
|
K:MET313
|
5.0
|
60.4
|
1.0
|
C
|
K:THR257
|
5.0
|
46.1
|
1.0
|
|
Chlorine binding site 4 out
of 8 in 9c6r
Go back to
Chlorine Binding Sites List in 9c6r
Chlorine binding site 4 out
of 8 in the Blood Cell-Specific Tubulin in Complex with Cryptophycin-52
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 4 of Blood Cell-Specific Tubulin in Complex with Cryptophycin-52 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
P:Cl1201
b:85.0
occ:1.00
|
CL1
|
P:YGY1201
|
0.0
|
85.0
|
1.0
|
C31
|
P:YGY1201
|
1.8
|
49.0
|
1.0
|
C32
|
P:YGY1201
|
2.7
|
49.9
|
1.0
|
C30
|
P:YGY1201
|
2.8
|
45.6
|
1.0
|
O8
|
P:YGY1201
|
2.9
|
49.5
|
1.0
|
CZ
|
Q:PHE394
|
3.4
|
35.9
|
1.0
|
C
|
P:LEU259
|
3.5
|
47.6
|
1.0
|
CD
|
P:PRO261
|
3.6
|
40.0
|
1.0
|
N
|
P:VAL260
|
3.6
|
47.3
|
1.0
|
N
|
P:PRO261
|
3.7
|
36.2
|
1.0
|
O
|
P:LEU259
|
3.7
|
52.6
|
1.0
|
CE2
|
Q:PHE394
|
3.9
|
43.2
|
1.0
|
C
|
P:VAL260
|
3.9
|
46.7
|
1.0
|
O
|
P:THR257
|
3.9
|
55.5
|
1.0
|
CA
|
P:LEU259
|
4.0
|
45.7
|
1.0
|
CB
|
P:PRO261
|
4.0
|
41.1
|
1.0
|
C33
|
P:YGY1201
|
4.0
|
61.5
|
1.0
|
O
|
P:ASN258
|
4.1
|
70.1
|
1.0
|
C29
|
P:YGY1201
|
4.1
|
61.8
|
1.0
|
CG
|
P:PRO261
|
4.1
|
38.3
|
1.0
|
C35
|
P:YGY1201
|
4.1
|
61.6
|
1.0
|
N
|
P:LEU259
|
4.1
|
48.5
|
1.0
|
CA
|
P:PRO261
|
4.1
|
41.6
|
1.0
|
C
|
P:ASN258
|
4.2
|
63.1
|
1.0
|
CA
|
P:VAL260
|
4.3
|
44.8
|
1.0
|
O
|
P:VAL260
|
4.4
|
53.6
|
1.0
|
CE1
|
Q:PHE394
|
4.5
|
37.1
|
1.0
|
C34
|
P:YGY1201
|
4.6
|
66.7
|
1.0
|
CB
|
P:ALA314
|
4.6
|
70.6
|
1.0
|
C
|
P:THR257
|
4.9
|
54.0
|
1.0
|
O
|
P:MET313
|
5.0
|
65.8
|
1.0
|
|
Chlorine binding site 5 out
of 8 in 9c6r
Go back to
Chlorine Binding Sites List in 9c6r
Chlorine binding site 5 out
of 8 in the Blood Cell-Specific Tubulin in Complex with Cryptophycin-52
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 5 of Blood Cell-Specific Tubulin in Complex with Cryptophycin-52 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
V:Cl1201
b:71.2
occ:1.00
|
CL1
|
V:YGY1201
|
0.0
|
71.2
|
1.0
|
C31
|
V:YGY1201
|
1.8
|
46.9
|
1.0
|
C32
|
V:YGY1201
|
2.7
|
44.0
|
1.0
|
C30
|
V:YGY1201
|
2.8
|
39.5
|
1.0
|
O8
|
V:YGY1201
|
2.9
|
49.4
|
1.0
|
CZ
|
V:PHE394
|
3.4
|
35.5
|
1.0
|
C
|
U:LEU259
|
3.6
|
41.6
|
1.0
|
CD
|
U:PRO261
|
3.6
|
40.5
|
1.0
|
N
|
U:VAL260
|
3.6
|
41.2
|
1.0
|
N
|
U:PRO261
|
3.7
|
38.3
|
1.0
|
O
|
U:LEU259
|
3.8
|
40.3
|
1.0
|
CE2
|
V:PHE394
|
3.9
|
48.0
|
1.0
|
C
|
U:VAL260
|
3.9
|
43.7
|
1.0
|
CB
|
U:PRO261
|
4.0
|
38.5
|
1.0
|
O
|
U:THR257
|
4.0
|
45.0
|
1.0
|
O
|
U:ASN258
|
4.0
|
58.0
|
1.0
|
CA
|
U:LEU259
|
4.0
|
41.8
|
1.0
|
C33
|
V:YGY1201
|
4.0
|
46.8
|
1.0
|
CG
|
U:PRO261
|
4.0
|
37.1
|
1.0
|
C29
|
V:YGY1201
|
4.1
|
48.5
|
1.0
|
C35
|
V:YGY1201
|
4.1
|
54.2
|
1.0
|
CA
|
U:PRO261
|
4.1
|
40.5
|
1.0
|
N
|
U:LEU259
|
4.2
|
38.4
|
1.0
|
C
|
U:ASN258
|
4.2
|
51.9
|
1.0
|
CA
|
U:VAL260
|
4.3
|
33.9
|
1.0
|
O
|
U:VAL260
|
4.4
|
52.3
|
1.0
|
CE1
|
V:PHE394
|
4.5
|
38.0
|
1.0
|
C34
|
V:YGY1201
|
4.6
|
52.9
|
1.0
|
CB
|
U:ALA314
|
4.7
|
64.3
|
1.0
|
C
|
U:THR257
|
5.0
|
45.7
|
1.0
|
O
|
U:MET313
|
5.0
|
60.0
|
1.0
|
|
Chlorine binding site 6 out
of 8 in 9c6r
Go back to
Chlorine Binding Sites List in 9c6r
Chlorine binding site 6 out
of 8 in the Blood Cell-Specific Tubulin in Complex with Cryptophycin-52
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 6 of Blood Cell-Specific Tubulin in Complex with Cryptophycin-52 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
a:Cl1201
b:84.0
occ:1.00
|
CL1
|
a:YGY1201
|
0.0
|
84.0
|
1.0
|
C31
|
a:YGY1201
|
1.8
|
48.4
|
1.0
|
C32
|
a:YGY1201
|
2.7
|
50.1
|
1.0
|
C30
|
a:YGY1201
|
2.8
|
44.7
|
1.0
|
O8
|
a:YGY1201
|
2.9
|
49.4
|
1.0
|
CZ
|
a:PHE394
|
3.4
|
36.0
|
1.0
|
C
|
Z:LEU259
|
3.5
|
47.2
|
1.0
|
CD
|
Z:PRO261
|
3.6
|
41.0
|
1.0
|
N
|
Z:PRO261
|
3.6
|
37.4
|
1.0
|
N
|
Z:VAL260
|
3.7
|
46.8
|
1.0
|
O
|
Z:LEU259
|
3.7
|
53.3
|
1.0
|
CE2
|
a:PHE394
|
3.8
|
43.3
|
1.0
|
C
|
Z:VAL260
|
3.9
|
46.8
|
1.0
|
CB
|
Z:PRO261
|
3.9
|
40.9
|
1.0
|
O
|
Z:THR257
|
4.0
|
55.1
|
1.0
|
CG
|
Z:PRO261
|
4.0
|
39.6
|
1.0
|
C33
|
a:YGY1201
|
4.0
|
61.2
|
1.0
|
C29
|
a:YGY1201
|
4.1
|
61.1
|
1.0
|
CA
|
Z:LEU259
|
4.1
|
45.0
|
1.0
|
C35
|
a:YGY1201
|
4.1
|
61.7
|
1.0
|
CA
|
Z:PRO261
|
4.1
|
41.9
|
1.0
|
O
|
Z:ASN258
|
4.1
|
70.7
|
1.0
|
N
|
Z:LEU259
|
4.2
|
48.3
|
1.0
|
C
|
Z:ASN258
|
4.3
|
63.7
|
1.0
|
CA
|
Z:VAL260
|
4.3
|
45.0
|
1.0
|
O
|
Z:VAL260
|
4.4
|
53.5
|
1.0
|
C34
|
a:YGY1201
|
4.6
|
66.5
|
1.0
|
CE1
|
a:PHE394
|
4.6
|
37.4
|
1.0
|
CB
|
Z:ALA314
|
4.7
|
69.7
|
1.0
|
C
|
Z:THR257
|
5.0
|
53.7
|
1.0
|
|
Chlorine binding site 7 out
of 8 in 9c6r
Go back to
Chlorine Binding Sites List in 9c6r
Chlorine binding site 7 out
of 8 in the Blood Cell-Specific Tubulin in Complex with Cryptophycin-52
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 7 of Blood Cell-Specific Tubulin in Complex with Cryptophycin-52 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
f:Cl1201
b:70.2
occ:1.00
|
CL1
|
f:YGY1201
|
0.0
|
70.2
|
1.0
|
C31
|
f:YGY1201
|
1.8
|
46.3
|
1.0
|
C32
|
f:YGY1201
|
2.7
|
42.8
|
1.0
|
C30
|
f:YGY1201
|
2.8
|
39.6
|
1.0
|
O8
|
f:YGY1201
|
2.9
|
48.0
|
1.0
|
CZ
|
f:PHE394
|
3.4
|
33.2
|
1.0
|
C
|
e:LEU259
|
3.6
|
41.0
|
1.0
|
CD
|
e:PRO261
|
3.6
|
40.2
|
1.0
|
N
|
e:VAL260
|
3.7
|
41.1
|
1.0
|
N
|
e:PRO261
|
3.7
|
38.3
|
1.0
|
O
|
e:LEU259
|
3.8
|
39.1
|
1.0
|
CE2
|
f:PHE394
|
3.9
|
45.2
|
1.0
|
C
|
e:VAL260
|
3.9
|
43.7
|
1.0
|
CB
|
e:PRO261
|
4.0
|
38.6
|
1.0
|
O
|
e:THR257
|
4.0
|
44.5
|
1.0
|
O
|
e:ASN258
|
4.0
|
57.4
|
1.0
|
CA
|
e:LEU259
|
4.0
|
40.9
|
1.0
|
C33
|
f:YGY1201
|
4.0
|
45.9
|
1.0
|
CG
|
e:PRO261
|
4.0
|
37.1
|
1.0
|
C29
|
f:YGY1201
|
4.1
|
48.6
|
1.0
|
C35
|
f:YGY1201
|
4.1
|
53.4
|
1.0
|
CA
|
e:PRO261
|
4.2
|
40.6
|
1.0
|
N
|
e:LEU259
|
4.2
|
37.2
|
1.0
|
C
|
e:ASN258
|
4.2
|
51.2
|
1.0
|
CA
|
e:VAL260
|
4.3
|
33.8
|
1.0
|
O
|
e:VAL260
|
4.4
|
52.0
|
1.0
|
CE1
|
f:PHE394
|
4.5
|
35.8
|
1.0
|
C34
|
f:YGY1201
|
4.6
|
52.1
|
1.0
|
CB
|
e:ALA314
|
4.7
|
63.4
|
1.0
|
O
|
e:MET313
|
5.0
|
59.4
|
1.0
|
C
|
e:THR257
|
5.0
|
45.3
|
1.0
|
|
Chlorine binding site 8 out
of 8 in 9c6r
Go back to
Chlorine Binding Sites List in 9c6r
Chlorine binding site 8 out
of 8 in the Blood Cell-Specific Tubulin in Complex with Cryptophycin-52
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 8 of Blood Cell-Specific Tubulin in Complex with Cryptophycin-52 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
k:Cl1201
b:83.4
occ:1.00
|
CL1
|
k:YGY1201
|
0.0
|
83.4
|
1.0
|
C31
|
k:YGY1201
|
1.8
|
47.8
|
1.0
|
C32
|
k:YGY1201
|
2.7
|
50.0
|
1.0
|
C30
|
k:YGY1201
|
2.8
|
44.6
|
1.0
|
O8
|
k:YGY1201
|
2.9
|
48.8
|
1.0
|
CZ
|
k:PHE394
|
3.4
|
36.0
|
1.0
|
C
|
j:LEU259
|
3.5
|
47.6
|
1.0
|
CD
|
j:PRO261
|
3.6
|
40.5
|
1.0
|
N
|
j:VAL260
|
3.6
|
46.9
|
1.0
|
N
|
j:PRO261
|
3.6
|
36.9
|
1.0
|
O
|
j:LEU259
|
3.7
|
53.1
|
1.0
|
CE2
|
k:PHE394
|
3.8
|
41.8
|
1.0
|
C
|
j:VAL260
|
3.9
|
47.0
|
1.0
|
CB
|
j:PRO261
|
3.9
|
41.5
|
1.0
|
O
|
j:THR257
|
4.0
|
55.9
|
1.0
|
CG
|
j:PRO261
|
4.0
|
39.7
|
1.0
|
C33
|
k:YGY1201
|
4.0
|
61.4
|
1.0
|
CA
|
j:LEU259
|
4.1
|
45.7
|
1.0
|
C29
|
k:YGY1201
|
4.1
|
61.7
|
1.0
|
C35
|
k:YGY1201
|
4.1
|
61.5
|
1.0
|
CA
|
j:PRO261
|
4.1
|
42.1
|
1.0
|
O
|
j:ASN258
|
4.1
|
70.3
|
1.0
|
N
|
j:LEU259
|
4.2
|
48.6
|
1.0
|
C
|
j:ASN258
|
4.3
|
63.9
|
1.0
|
CA
|
j:VAL260
|
4.3
|
45.0
|
1.0
|
O
|
j:VAL260
|
4.4
|
53.4
|
1.0
|
C34
|
k:YGY1201
|
4.6
|
66.7
|
1.0
|
CE1
|
k:PHE394
|
4.6
|
36.8
|
1.0
|
CB
|
j:ALA314
|
4.7
|
70.4
|
1.0
|
O
|
j:MET313
|
5.0
|
64.6
|
1.0
|
C
|
j:THR257
|
5.0
|
54.4
|
1.0
|
|
Reference:
F.Montecinos,
F.Montecinos.
N/A N/A.
Page generated: Sat Feb 8 17:28:21 2025
|