Chlorine in PDB 9dw9: Phosphorylated (E1371Q)Cftr in Complex with Pka-C
Enzymatic activity of Phosphorylated (E1371Q)Cftr in Complex with Pka-C
All present enzymatic activity of Phosphorylated (E1371Q)Cftr in Complex with Pka-C:
2.7.11.11;
5.6.1.6;
Other elements in 9dw9:
The structure of Phosphorylated (E1371Q)Cftr in Complex with Pka-C also contains other interesting chemical elements:
Chlorine Binding Sites:
The binding sites of Chlorine atom in the Phosphorylated (E1371Q)Cftr in Complex with Pka-C
(pdb code 9dw9). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 4 binding sites of Chlorine where determined in the
Phosphorylated (E1371Q)Cftr in Complex with Pka-C, PDB code: 9dw9:
Jump to Chlorine binding site number:
1;
2;
3;
4;
Chlorine binding site 1 out
of 4 in 9dw9
Go back to
Chlorine Binding Sites List in 9dw9
Chlorine binding site 1 out
of 4 in the Phosphorylated (E1371Q)Cftr in Complex with Pka-C
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of Phosphorylated (E1371Q)Cftr in Complex with Pka-C within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl1507
b:53.6
occ:1.00
|
O
|
A:GLY103
|
3.1
|
41.0
|
1.0
|
OH
|
A:TYR914
|
3.6
|
42.4
|
1.0
|
CG
|
A:ARG334
|
3.7
|
37.5
|
1.0
|
CA
|
A:GLY103
|
3.7
|
34.1
|
1.0
|
C
|
A:GLY103
|
3.8
|
38.9
|
1.0
|
CD2
|
A:PHE337
|
3.9
|
33.9
|
1.0
|
OG1
|
A:THR338
|
3.9
|
38.7
|
1.0
|
CE1
|
A:TYR914
|
4.0
|
35.1
|
1.0
|
CZ
|
A:TYR914
|
4.3
|
35.4
|
1.0
|
NE
|
A:ARG334
|
4.3
|
54.5
|
1.0
|
N
|
A:ALA107
|
4.3
|
39.2
|
1.0
|
O
|
A:ARG334
|
4.4
|
41.2
|
1.0
|
CB
|
A:ILE106
|
4.4
|
34.7
|
1.0
|
CG2
|
A:ILE106
|
4.4
|
35.6
|
1.0
|
CB
|
A:ALA107
|
4.4
|
41.3
|
1.0
|
CE2
|
A:PHE337
|
4.5
|
35.5
|
1.0
|
CD
|
A:ARG334
|
4.5
|
45.9
|
1.0
|
CB
|
A:ARG334
|
4.7
|
36.1
|
1.0
|
CA
|
A:ALA107
|
4.8
|
39.1
|
1.0
|
CA
|
A:ARG334
|
4.8
|
37.9
|
1.0
|
CG
|
A:PHE337
|
4.9
|
33.2
|
1.0
|
C
|
A:ILE106
|
4.9
|
38.3
|
1.0
|
CB
|
A:PHE337
|
5.0
|
34.1
|
1.0
|
C
|
A:ARG334
|
5.0
|
39.4
|
1.0
|
|
Chlorine binding site 2 out
of 4 in 9dw9
Go back to
Chlorine Binding Sites List in 9dw9
Chlorine binding site 2 out
of 4 in the Phosphorylated (E1371Q)Cftr in Complex with Pka-C
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of Phosphorylated (E1371Q)Cftr in Complex with Pka-C within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl1508
b:72.3
occ:1.00
|
NH1
|
A:ARG104
|
4.0
|
50.5
|
1.0
|
CG
|
A:ARG104
|
4.0
|
44.2
|
1.0
|
N
|
A:ARG104
|
4.1
|
41.3
|
1.0
|
NH2
|
A:ARG334
|
4.1
|
49.8
|
1.0
|
C
|
A:GLY103
|
4.1
|
38.9
|
1.0
|
O
|
A:PRO99
|
4.2
|
38.4
|
1.0
|
CG2
|
A:THR338
|
4.2
|
33.0
|
1.0
|
CA
|
A:GLY103
|
4.2
|
34.1
|
1.0
|
OG1
|
A:THR338
|
4.3
|
38.7
|
1.0
|
CZ
|
A:ARG104
|
4.4
|
51.7
|
1.0
|
O
|
A:LEU100
|
4.5
|
45.2
|
1.0
|
CL
|
A:CL1509
|
4.6
|
64.5
|
1.0
|
O
|
A:GLY103
|
4.7
|
41.0
|
1.0
|
NE
|
A:ARG334
|
4.7
|
54.5
|
1.0
|
CA
|
A:ARG104
|
4.8
|
43.1
|
1.0
|
NE
|
A:ARG104
|
4.9
|
52.5
|
1.0
|
CA
|
A:LEU100
|
4.9
|
41.0
|
1.0
|
CB
|
A:THR338
|
4.9
|
35.6
|
1.0
|
NH2
|
A:ARG104
|
4.9
|
49.9
|
1.0
|
CZ
|
A:ARG334
|
4.9
|
53.9
|
1.0
|
N
|
A:GLY103
|
5.0
|
39.1
|
1.0
|
CB
|
A:ARG104
|
5.0
|
45.9
|
1.0
|
|
Chlorine binding site 3 out
of 4 in 9dw9
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Chlorine Binding Sites List in 9dw9
Chlorine binding site 3 out
of 4 in the Phosphorylated (E1371Q)Cftr in Complex with Pka-C
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 3 of Phosphorylated (E1371Q)Cftr in Complex with Pka-C within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl1509
b:64.5
occ:1.00
|
CD2
|
A:LEU100
|
3.7
|
39.8
|
1.0
|
CG
|
A:LEU218
|
4.1
|
49.7
|
1.0
|
CE2
|
A:PHE342
|
4.1
|
33.5
|
1.0
|
OE2
|
A:GLU217
|
4.1
|
71.2
|
1.0
|
CD2
|
A:LEU218
|
4.1
|
48.6
|
1.0
|
CD
|
A:GLU217
|
4.3
|
67.6
|
1.0
|
CG
|
A:GLU217
|
4.3
|
57.4
|
1.0
|
CD1
|
A:LEU218
|
4.4
|
43.4
|
1.0
|
CZ
|
A:PHE342
|
4.5
|
36.7
|
1.0
|
CL
|
A:CL1508
|
4.6
|
72.3
|
1.0
|
CG2
|
A:THR338
|
4.6
|
33.0
|
1.0
|
O
|
A:LEU214
|
4.6
|
44.0
|
1.0
|
OE1
|
A:GLU217
|
4.9
|
67.8
|
1.0
|
|
Chlorine binding site 4 out
of 4 in 9dw9
Go back to
Chlorine Binding Sites List in 9dw9
Chlorine binding site 4 out
of 4 in the Phosphorylated (E1371Q)Cftr in Complex with Pka-C
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 4 of Phosphorylated (E1371Q)Cftr in Complex with Pka-C within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl1510
b:76.0
occ:1.00
|
O
|
A:HOH1603
|
3.7
|
48.5
|
1.0
|
CD2
|
A:LEU218
|
3.9
|
48.6
|
1.0
|
O
|
A:GLU217
|
4.0
|
58.1
|
1.0
|
NZ
|
A:LYS335
|
4.0
|
38.7
|
1.0
|
OE1
|
A:GLU217
|
4.2
|
67.8
|
1.0
|
CA
|
A:LEU218
|
4.6
|
50.6
|
1.0
|
CD
|
A:GLU217
|
4.7
|
67.6
|
1.0
|
C
|
A:GLU217
|
4.7
|
53.5
|
1.0
|
CG
|
A:GLU217
|
4.7
|
57.4
|
1.0
|
CG
|
A:LEU218
|
4.8
|
49.7
|
1.0
|
N
|
A:LEU218
|
4.9
|
52.3
|
1.0
|
|
Reference:
K.Fiedorczuk,
I.Iordanov,
C.Mihalyi,
A.Szollosi,
L.Csanady,
J.Chen.
The Structures of Protein Kinase A in Complex with Cftr: Mechanisms of Phosphorylation and Non-Catalytic Activation To Be Published.
Page generated: Wed Nov 27 17:10:27 2024
|