Chlorine in PDB 9egw: Hoil-1 RING2 Domain Bound to Ubiquitin-Maltose (Maltose Not Modelled)

Enzymatic activity of Hoil-1 RING2 Domain Bound to Ubiquitin-Maltose (Maltose Not Modelled)

All present enzymatic activity of Hoil-1 RING2 Domain Bound to Ubiquitin-Maltose (Maltose Not Modelled):
2.3.2.31;

Protein crystallography data

The structure of Hoil-1 RING2 Domain Bound to Ubiquitin-Maltose (Maltose Not Modelled), PDB code: 9egw was solved by X.S.Wang, B.C.Lechtenberg, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 46.86 / 1.78
Space group I 41 2 2
Cell size a, b, c (Å), α, β, γ (°) 96.063, 96.063, 187.434, 90, 90, 90
R / Rfree (%) 16.5 / 18.2

Other elements in 9egw:

The structure of Hoil-1 RING2 Domain Bound to Ubiquitin-Maltose (Maltose Not Modelled) also contains other interesting chemical elements:

Zinc (Zn) 6 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Hoil-1 RING2 Domain Bound to Ubiquitin-Maltose (Maltose Not Modelled) (pdb code 9egw). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Hoil-1 RING2 Domain Bound to Ubiquitin-Maltose (Maltose Not Modelled), PDB code: 9egw:

Chlorine binding site 1 out of 1 in 9egw

Go back to Chlorine Binding Sites List in 9egw
Chlorine binding site 1 out of 1 in the Hoil-1 RING2 Domain Bound to Ubiquitin-Maltose (Maltose Not Modelled)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Hoil-1 RING2 Domain Bound to Ubiquitin-Maltose (Maltose Not Modelled) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl604

b:31.9
occ:1.00
 H A:GLU471 2.4 26.3 1.0
HD3 A:PRO486 2.8 38.2 1.0
HD1 A:TRP481 2.9 24.9 1.0
O A:HOH713 3.1 34.2 1.0
HB2 A:GLU471 3.1 32.8 1.0
HA A:THR470 3.2 27.3 1.0
O A:HOH730 3.2 21.8 1.0
N A:GLU471 3.2 21.9 1.0
HA2 A:GLY485 3.3 32.7 1.0
O A:HOH708 3.4 47.5 1.0
HG3 A:GLU471 3.4 31.1 1.0
HG23 A:THR470 3.5 34.6 1.0
HG3 A:PRO486 3.5 35.9 1.0
HB2 A:TRP481 3.5 26.6 1.0
CD A:PRO486 3.7 31.9 1.0
CD1 A:TRP481 3.7 20.7 1.0
CB A:GLU471 3.8 27.3 1.0
CA A:THR470 4.0 22.8 1.0
CG A:GLU471 4.1 25.9 1.0
CA A:GLU471 4.1 22.3 1.0
CG A:PRO486 4.1 29.9 1.0
CA A:GLY485 4.1 27.2 1.0
C A:THR470 4.1 22.4 1.0
N A:PRO486 4.1 27.1 1.0
CG2 A:THR470 4.3 28.8 1.0
HG22 A:THR470 4.3 34.6 1.0
C A:GLY485 4.3 23.3 1.0
CB A:TRP481 4.4 22.1 1.0
CG A:TRP481 4.4 22.6 1.0
HD2 A:PRO486 4.4 38.2 1.0
HA3 A:GLY485 4.5 32.7 1.0
O A:GLU471 4.5 20.9 1.0
O A:HIS469 4.5 28.4 1.0
O A:HOH765 4.6 39.3 1.0
HG2 A:PRO486 4.7 35.9 1.0
HB3 A:GLU471 4.7 32.8 1.0
CD A:GLU471 4.7 34.2 1.0
HA A:PRO486 4.7 29.3 1.0
H A:TRP481 4.7 25.3 1.0
CB A:THR470 4.7 25.8 1.0
NE1 A:TRP481 4.7 23.2 1.0
C A:GLU471 4.8 24.8 1.0
HE1 A:TRP481 4.9 27.8 1.0
HA A:GLU471 4.9 26.8 1.0
HG2 A:GLU471 4.9 31.1 1.0
HB3 A:ARG480 4.9 24.2 1.0
HB3 A:TRP481 4.9 26.6 1.0
CA A:PRO486 4.9 24.4 1.0

Reference:

X.S.Wang, J.Jiou, A.Cerra, S.A.Cobbold, M.Jochem, K.H.T.Mak, L.Corcilius, R.J.Payne, E.D.Goddard-Borger, D.Komander, B.C.Lechtenberg. The Rbr E3 Ubiquitin Ligase Hoil-1 Can Ubiquitinate Diverse Non-Protein Substrates in Vitro Biorxiv 2024.
ISSN: ISSN 2692-8205
Page generated: Sun Dec 15 10:15:26 2024

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