Chlorine in PDB 9ka0: Room-Temperature Structure of Lysozyme Determined By Serial Synchrotron Crystallography (Xgandalf)

All present enzymatic activity of Room-Temperature Structure of Lysozyme Determined By Serial Synchrotron Crystallography (Xgandalf):
3.2.1.17;

The structure of Room-Temperature Structure of Lysozyme Determined By Serial Synchrotron Crystallography (Xgandalf), PDB code: 9ka0 was solved by K.H.Nam, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	39.51 / 1.80
Space group	P 43 21 2
Cell size a, b, c (Å), α, β, γ (°)	79.03, 79.03, 38.24, 90, 90, 90
R / Rfree (%)	17.1 / 19

The structure of Room-Temperature Structure of Lysozyme Determined By Serial Synchrotron Crystallography (Xgandalf) also contains other interesting chemical elements:

Sodium

(Na)

1 atom

The binding sites of Chlorine atom in the Room-Temperature Structure of Lysozyme Determined By Serial Synchrotron Crystallography (Xgandalf) (pdb code 9ka0). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Room-Temperature Structure of Lysozyme Determined By Serial Synchrotron Crystallography (Xgandalf), PDB code: 9ka0:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in the Room-Temperature Structure of Lysozyme Determined By Serial Synchrotron Crystallography (Xgandalf)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Room-Temperature Structure of Lysozyme Determined By Serial Synchrotron Crystallography (Xgandalf) within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl202 b:31.8 occ:1.00 OH A:TYR41 2.9 23.1 1.0 O A:HOH350 3.5 31.0 1.0 CZ A:TYR41 3.6 20.5 1.0 CE2 A:TYR41 3.7 23.2 1.0 CA A:GLY122 4.0 24.2 1.0 N A:GLY122 4.6 25.7 1.0 O A:HOH306 4.7 34.7 1.0 O A:ARG39 4.7 29.6 1.0 CE1 A:TYR41 4.8 22.0 1.0 CD2 A:TYR41 4.9 21.2 1.0

Chlorine binding site 2 out of 2 in the Room-Temperature Structure of Lysozyme Determined By Serial Synchrotron Crystallography (Xgandalf)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Room-Temperature Structure of Lysozyme Determined By Serial Synchrotron Crystallography (Xgandalf) within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl203 b:39.6 occ:1.00 OG A:SER42 3.0 28.8 1.0 N A:GLY44 3.0 21.3 1.0 CA A:GLY44 3.4 23.1 1.0 CB A:SER42 3.5 29.0 1.0 CA A:GLN139 3.7 30.3 1.0 CD1 A:ILE142 3.7 37.2 1.0 N A:LEU43 4.0 25.9 1.0 N A:GLN139 4.0 29.4 1.0 CB A:GLN139 4.0 36.3 1.0 C A:LEU43 4.2 23.0 1.0 C A:SER42 4.2 27.4 1.0 CG1 A:ILE142 4.2 33.3 1.0 O A:VAL138 4.3 25.6 1.0 C A:VAL138 4.4 31.1 1.0 CG A:GLN139 4.4 45.5 1.0 CG2 A:VAL138 4.4 27.9 1.0 CA A:SER42 4.5 26.4 1.0 C A:GLY44 4.5 23.9 1.0 CA A:LEU43 4.5 24.9 1.0 O A:SER42 4.7 21.9 1.0 N A:ASN45 4.7 20.2 1.0 CB A:LEU43 4.8 27.9 1.0 C A:GLN139 4.9 31.0 1.0

K.H.Nam, K.H.Nam. N/A N/A.