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Chlorine in PDB 13sl: Pandda Analysis Group Deposition -- Idol Ring Domain in Complex with Z275151340

Enzymatic activity of Pandda Analysis Group Deposition -- Idol Ring Domain in Complex with Z275151340

All present enzymatic activity of Pandda Analysis Group Deposition -- Idol Ring Domain in Complex with Z275151340:
2.3.2.27;

Protein crystallography data

The structure of Pandda Analysis Group Deposition -- Idol Ring Domain in Complex with Z275151340, PDB code: 13sl was solved by W.J.Bradshaw, F.Guenther, E.J.Murphy, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 70.51 / 1.34
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 44.687, 47.789, 70.521, 90, 90.99, 90
R / Rfree (%) 19.6 / 21.4

Other elements in 13sl:

The structure of Pandda Analysis Group Deposition -- Idol Ring Domain in Complex with Z275151340 also contains other interesting chemical elements:

Zinc (Zn) 8 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Pandda Analysis Group Deposition -- Idol Ring Domain in Complex with Z275151340 (pdb code 13sl). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 4 binding sites of Chlorine where determined in the Pandda Analysis Group Deposition -- Idol Ring Domain in Complex with Z275151340, PDB code: 13sl:
Jump to Chlorine binding site number: 1; 2; 3; 4;

Chlorine binding site 1 out of 4 in 13sl

Go back to Chlorine Binding Sites List in 13sl
Chlorine binding site 1 out of 4 in the Pandda Analysis Group Deposition -- Idol Ring Domain in Complex with Z275151340


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Pandda Analysis Group Deposition -- Idol Ring Domain in Complex with Z275151340 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl503

b:23.6
occ:0.95
 CL15 A:JHP503 0.0 23.6 0.9
C04 A:JHP503 1.7 22.0 0.9
C03 A:JHP503 2.7 21.1 0.9
C05 A:JHP503 2.8 21.9 0.9
O08 A:JHP503 3.2 22.2 0.9
CD A:GLU383 3.3 26.1 1.0
C07 A:JHP503 3.4 23.4 0.9
OE1 A:GLU383 3.5 26.7 1.0
CG A:GLU383 3.6 22.1 1.0
OE2 A:GLU383 3.6 26.0 1.0
N02 A:JHP503 3.8 20.6 0.9
N06 A:JHP503 3.9 20.7 0.9
CB A:GLU383 3.9 22.4 1.0
O A:HOH608 4.5 40.9 1.0
O A:HOH617 4.5 29.3 1.0
N09 A:JHP503 4.8 24.6 0.9

Chlorine binding site 2 out of 4 in 13sl

Go back to Chlorine Binding Sites List in 13sl
Chlorine binding site 2 out of 4 in the Pandda Analysis Group Deposition -- Idol Ring Domain in Complex with Z275151340


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Pandda Analysis Group Deposition -- Idol Ring Domain in Complex with Z275151340 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl503

b:22.7
occ:0.98
 CL15 B:JHP503 0.0 22.7 1.0
C04 B:JHP503 1.7 21.8 1.0
C03 B:JHP503 2.7 21.7 1.0
C05 B:JHP503 2.8 22.0 1.0
O08 B:JHP503 3.1 22.1 1.0
CD B:GLU383 3.3 25.8 1.0
C07 B:JHP503 3.4 22.5 1.0
OE1 B:GLU383 3.4 24.3 1.0
OE2 B:GLU383 3.5 25.6 1.0
CG B:GLU383 3.6 21.5 1.0
N02 B:JHP503 3.8 21.8 1.0
N06 B:JHP503 3.9 22.2 1.0
CB B:GLU383 4.0 20.2 1.0
O B:HOH604 4.0 40.9 1.0
O B:HOH609 4.4 26.8 1.0
O B:HOH616 4.5 39.2 1.0
N09 B:JHP503 4.7 22.9 1.0

Chlorine binding site 3 out of 4 in 13sl

Go back to Chlorine Binding Sites List in 13sl
Chlorine binding site 3 out of 4 in the Pandda Analysis Group Deposition -- Idol Ring Domain in Complex with Z275151340


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Pandda Analysis Group Deposition -- Idol Ring Domain in Complex with Z275151340 within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl503

b:25.1
occ:1.00
 CL15 C:JHP503 0.0 25.1 1.0
C04 C:JHP503 1.7 23.3 1.0
C03 C:JHP503 2.8 23.0 1.0
C05 C:JHP503 2.8 23.5 1.0
O08 C:JHP503 3.1 24.8 1.0
CD C:GLU383 3.3 28.7 1.0
C07 C:JHP503 3.4 24.9 1.0
OE2 C:GLU383 3.5 30.1 1.0
OE1 C:GLU383 3.5 25.8 1.0
CG C:GLU383 3.5 23.9 1.0
O C:HOH620 3.6 22.1 1.0
N02 C:JHP503 3.9 22.5 1.0
N06 C:JHP503 3.9 23.0 1.0
CB C:GLU383 3.9 22.0 1.0
O C:HOH642 4.1 36.7 1.0
O C:HOH603 4.2 27.7 1.0
O C:HOH608 4.3 47.9 1.0
N09 C:JHP503 4.7 25.7 1.0

Chlorine binding site 4 out of 4 in 13sl

Go back to Chlorine Binding Sites List in 13sl
Chlorine binding site 4 out of 4 in the Pandda Analysis Group Deposition -- Idol Ring Domain in Complex with Z275151340


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Pandda Analysis Group Deposition -- Idol Ring Domain in Complex with Z275151340 within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cl503

b:25.7
occ:0.90
 CL15 D:JHP503 0.0 25.7 0.9
C04 D:JHP503 1.7 25.6 0.9
C03 D:JHP503 2.7 26.6 0.9
C05 D:JHP503 2.8 24.7 0.9
O08 D:JHP503 3.2 22.1 0.9
CD D:GLU383 3.3 31.1 1.0
OE1 D:GLU383 3.4 32.0 1.0
C07 D:JHP503 3.4 22.8 0.9
O D:HOH617 3.6 23.7 1.0
CG D:GLU383 3.6 25.9 1.0
OE2 D:GLU383 3.6 32.5 1.0
N02 D:JHP503 3.9 26.4 0.9
O D:HOH604 3.9 42.0 1.0
N06 D:JHP503 3.9 25.0 0.9
CB D:GLU383 4.0 21.2 1.0
O D:HOH605 4.6 34.9 1.0
N09 D:JHP503 4.8 23.3 0.9

Reference:

W.J.Bradshaw, F.Guenther, E.J.Murphy. Pandda Analysis Group Deposition To Be Published.
Page generated: Sun Dec 14 16:32:25 2025

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