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Chlorine in PDB 6cdr: Human CTBP1 (28-378)

Protein crystallography data

The structure of Human CTBP1 (28-378), PDB code: 6cdr was solved by W.E.Royer, A.G.Bellesis, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 36.26 / 2.40
Space group P 64 2 2
Cell size a, b, c (Å), α, β, γ (°) 89.218, 89.218, 164.233, 90.00, 90.00, 120.00
R / Rfree (%) 23.5 / 26.2

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Human CTBP1 (28-378) (pdb code 6cdr). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Human CTBP1 (28-378), PDB code: 6cdr:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 6cdr

Go back to Chlorine Binding Sites List in 6cdr
Chlorine binding site 1 out of 2 in the Human CTBP1 (28-378)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Human CTBP1 (28-378) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl402

b:42.9
occ:1.00
HE2 A:HIS315 2.3 41.7 1.0
HH12 A:ARG266 2.6 44.0 1.0
HH22 A:ARG266 2.6 46.7 1.0
NE2 A:HIS315 3.2 34.8 1.0
H4N A:NAI401 3.3 41.8 1.0
NH1 A:ARG266 3.4 36.7 1.0
NH2 A:ARG266 3.4 38.9 1.0
C3N A:NAI401 3.6 33.3 1.0
HH22 A:ARG97 3.7 49.9 1.0
C2N A:NAI401 3.8 32.1 1.0
CZ A:ARG266 3.8 36.3 1.0
C4N A:NAI401 3.9 34.9 1.0
C7N A:NAI401 3.9 32.9 1.0
H71N A:NAI401 4.0 39.9 1.0
HH11 A:ARG266 4.0 44.0 1.0
CE1 A:HIS315 4.1 37.2 1.0
HH21 A:ARG266 4.1 46.7 1.0
H2N A:NAI401 4.1 38.5 1.0
N7N A:NAI401 4.1 33.2 1.0
HE1 A:HIS315 4.1 44.6 1.0
HH21 A:ARG97 4.2 49.9 1.0
CD2 A:HIS315 4.2 35.0 1.0
N1N A:NAI401 4.2 31.9 1.0
HD2 A:HIS315 4.2 42.0 1.0
H A:GLY101 4.2 43.9 1.0
NH2 A:ARG97 4.3 41.6 1.0
C5N A:NAI401 4.3 34.0 1.0
H21 A:EDO404 4.3 41.8 1.0
HO2 A:EDO404 4.4 48.7 1.0
O2 A:EDO404 4.4 40.6 1.0
HB3 A:TRP318 4.5 39.8 1.0
C6N A:NAI401 4.5 33.7 1.0
O2D A:NAI401 4.5 37.1 1.0
HB3 A:HIS77 4.5 46.9 1.0
O7N A:NAI401 4.5 34.8 1.0
HD1 A:TRP318 4.6 40.4 1.0
O1 A:EDO404 4.6 42.5 1.0
H A:SER100 4.7 44.1 1.0
H72N A:NAI401 4.7 39.9 1.0
H42N A:NAI401 4.9 41.8 1.0
C2 A:EDO404 4.9 34.9 1.0
HA3 A:GLY101 4.9 44.9 1.0
CD1 A:TRP318 4.9 33.7 1.0
HO2N A:NAI401 5.0 44.5 1.0
H5N A:NAI401 5.0 40.8 1.0

Chlorine binding site 2 out of 2 in 6cdr

Go back to Chlorine Binding Sites List in 6cdr
Chlorine binding site 2 out of 2 in the Human CTBP1 (28-378)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Human CTBP1 (28-378) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl403

b:65.4
occ:1.00
HE22 A:GLN218 1.9 61.1 1.0
NE2 A:GLN218 2.7 50.9 1.0
HE21 A:GLN218 3.2 61.1 1.0
CD A:GLN218 3.7 50.0 1.0
OE1 A:GLN218 3.8 52.4 1.0
O A:HOH595 3.8 46.7 1.0
HD2 A:HIS229 4.1 60.8 1.0
CD2 A:HIS229 4.2 50.7 1.0
HD21 A:LEU201 4.4 53.9 1.0
HD11 A:LEU201 4.4 50.8 1.0
NE2 A:HIS229 4.5 51.8 1.0
HD22 A:LEU201 4.7 53.9 1.0
CG A:HIS229 4.7 49.0 1.0
HD13 A:LEU201 4.8 50.8 1.0
HB3 A:HIS229 4.9 51.7 1.0

Reference:

A.G.Bellesis, A.M.Jecrois, J.A.Hayes, C.A.Schiffer, W.E.Royer. Assembly of Human C-Terminal Binding Protein (Ctbp) Into Tetramers. J. Biol. Chem. V. 293 9101 2018.
ISSN: ESSN 1083-351X
PubMed: 29700119
DOI: 10.1074/JBC.RA118.002514
Page generated: Fri Jul 26 23:29:32 2024

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