Chlorine in PDB 7s6g: Crystal Structure of Phnd From Synechococcus MITS9220 in Complex with Phosphate
Protein crystallography data
The structure of Crystal Structure of Phnd From Synechococcus MITS9220 in Complex with Phosphate, PDB code: 7s6g
was solved by
B.S.Shah,
H.Mikolajek,
C.M.Orr,
V.Mykhaylyk,
R.J.Owens,
I.T.Paulsen,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
|
Resolution Low / High (Å)
|
106.61 /
2.02
|
|
Space group
|
C 1 2 1
|
|
Cell size a, b, c (Å), α, β, γ (°)
|
63.59,
40.67,
106.68,
90,
92.13,
90
|
|
R / Rfree (%)
|
15.3 /
17.6
|
Chlorine Binding Sites:
The binding sites of Chlorine atom in the Crystal Structure of Phnd From Synechococcus MITS9220 in Complex with Phosphate
(pdb code 7s6g). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 10 binding sites of Chlorine where determined in the
Crystal Structure of Phnd From Synechococcus MITS9220 in Complex with Phosphate, PDB code: 7s6g:
Jump to Chlorine binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Chlorine binding site 1 out
of 10 in 7s6g
Go back to
Chlorine Binding Sites List in 7s6g
Chlorine binding site 1 out
of 10 in the Crystal Structure of Phnd From Synechococcus MITS9220 in Complex with Phosphate
 Mono view
 Stereo pair view
|
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of Crystal Structure of Phnd From Synechococcus MITS9220 in Complex with Phosphate within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl301
b:55.1
occ:1.00
|
HH22
|
A:ARG128
|
2.1
|
16.6
|
1.0
|
|
NH2
|
A:ARG128
|
2.9
|
16.4
|
1.0
|
|
HH12
|
A:ARG128
|
3.0
|
16.4
|
1.0
|
|
HZ1
|
A:LYS270
|
3.0
|
48.9
|
1.0
|
|
HB3
|
A:GLU122
|
3.2
|
19.4
|
1.0
|
|
HG2
|
A:GLU122
|
3.2
|
25.4
|
1.0
|
|
HH21
|
A:ARG128
|
3.5
|
16.6
|
1.0
|
|
NH1
|
A:ARG128
|
3.7
|
16.2
|
1.0
|
|
CZ
|
A:ARG128
|
3.8
|
17.0
|
1.0
|
|
OE1
|
A:GLU122
|
3.8
|
51.8
|
1.0
|
|
NZ
|
A:LYS270
|
3.9
|
50.2
|
1.0
|
|
CG
|
A:GLU122
|
3.9
|
24.2
|
1.0
|
|
CB
|
A:GLU122
|
4.0
|
19.1
|
1.0
|
|
HD2
|
A:LYS270
|
4.1
|
42.5
|
1.0
|
|
HZ2
|
A:LYS270
|
4.2
|
48.8
|
1.0
|
|
HE3
|
A:LYS270
|
4.2
|
46.6
|
1.0
|
|
CD
|
A:GLU122
|
4.4
|
37.9
|
1.0
|
|
HZ3
|
A:LYS270
|
4.4
|
48.9
|
1.0
|
|
HA
|
A:GLU122
|
4.5
|
15.6
|
1.0
|
|
CE
|
A:LYS270
|
4.5
|
46.3
|
1.0
|
|
HH11
|
A:ARG128
|
4.5
|
16.4
|
1.0
|
|
HZ
|
A:PHE152
|
4.5
|
18.9
|
1.0
|
|
HB2
|
A:GLU122
|
4.7
|
19.4
|
1.0
|
|
CD
|
A:LYS270
|
4.7
|
44.4
|
1.0
|
|
CZ
|
A:PHE152
|
4.7
|
19.4
|
1.0
|
|
CA
|
A:GLU122
|
4.8
|
16.1
|
1.0
|
|
HG3
|
A:GLU122
|
4.8
|
25.3
|
1.0
|
|
O
|
A:GLU122
|
4.8
|
12.8
|
1.0
|
|
HD3
|
A:LYS270
|
5.0
|
42.4
|
1.0
|
|
HE1
|
A:PHE152
|
5.0
|
17.7
|
1.0
|
|
CE1
|
A:PHE152
|
5.0
|
17.4
|
1.0
|
|
Chlorine binding site 2 out
of 10 in 7s6g
Go back to
Chlorine Binding Sites List in 7s6g
Chlorine binding site 2 out
of 10 in the Crystal Structure of Phnd From Synechococcus MITS9220 in Complex with Phosphate
 Mono view
 Stereo pair view
|
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of Crystal Structure of Phnd From Synechococcus MITS9220 in Complex with Phosphate within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl302
b:46.1
occ:1.00
|
HG3
|
A:GLN214
|
2.6
|
30.3
|
1.0
|
|
HA
|
A:LYS211
|
2.6
|
20.4
|
1.0
|
|
HB2
|
A:ASP213
|
3.0
|
19.0
|
1.0
|
|
O
|
A:HOH588
|
3.1
|
20.1
|
1.0
|
|
HE22
|
A:GLN214
|
3.4
|
44.0
|
1.0
|
|
H
|
A:GLN214
|
3.4
|
19.0
|
1.0
|
|
CG
|
A:GLN214
|
3.5
|
29.7
|
1.0
|
|
HG2
|
A:LYS211
|
3.6
|
28.1
|
1.0
|
|
CA
|
A:LYS211
|
3.6
|
19.7
|
1.0
|
|
HG2
|
A:GLN214
|
3.9
|
30.3
|
1.0
|
|
CB
|
A:ASP213
|
3.9
|
18.5
|
1.0
|
|
N
|
A:GLN214
|
3.9
|
18.8
|
1.0
|
|
H
|
A:ASP213
|
3.9
|
16.1
|
1.0
|
|
NE2
|
A:GLN214
|
4.0
|
46.1
|
1.0
|
|
C
|
A:LYS211
|
4.2
|
18.4
|
1.0
|
|
CD
|
A:GLN214
|
4.2
|
39.7
|
1.0
|
|
CG
|
A:LYS211
|
4.2
|
27.6
|
1.0
|
|
HB3
|
A:ASP213
|
4.2
|
19.0
|
1.0
|
|
HB3
|
A:LYS211
|
4.2
|
23.9
|
1.0
|
|
H
|
A:LYS211
|
4.2
|
19.0
|
1.0
|
|
CB
|
A:LYS211
|
4.3
|
24.5
|
1.0
|
|
HG3
|
A:LYS211
|
4.3
|
28.1
|
1.0
|
|
O
|
A:LYS211
|
4.4
|
18.9
|
1.0
|
|
N
|
A:ASP213
|
4.4
|
15.3
|
1.0
|
|
C
|
A:ASP213
|
4.4
|
18.2
|
1.0
|
|
CA
|
A:ASP213
|
4.4
|
18.2
|
1.0
|
|
N
|
A:LYS211
|
4.5
|
19.9
|
1.0
|
|
O
|
A:HOH523
|
4.5
|
30.9
|
1.0
|
|
CB
|
A:GLN214
|
4.5
|
24.1
|
1.0
|
|
HB2
|
A:GLN214
|
4.5
|
24.3
|
1.0
|
|
O
|
A:HOH469
|
4.6
|
33.6
|
1.0
|
|
HE21
|
A:GLN214
|
4.7
|
44.0
|
1.0
|
|
CA
|
A:GLN214
|
4.7
|
20.3
|
1.0
|
|
HZ1
|
A:LYS211
|
4.7
|
42.2
|
1.0
|
|
HA
|
A:GLN214
|
4.8
|
20.2
|
1.0
|
|
N
|
A:LEU212
|
4.9
|
14.9
|
1.0
|
|
CG
|
A:ASP213
|
4.9
|
21.0
|
1.0
|
|
Chlorine binding site 3 out
of 10 in 7s6g
Go back to
Chlorine Binding Sites List in 7s6g
Chlorine binding site 3 out
of 10 in the Crystal Structure of Phnd From Synechococcus MITS9220 in Complex with Phosphate
 Mono view
 Stereo pair view
|
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 3 of Crystal Structure of Phnd From Synechococcus MITS9220 in Complex with Phosphate within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl303
b:39.5
occ:1.00
|
H
|
A:SER143
|
2.3
|
20.3
|
1.0
|
|
HB
|
A:THR141
|
2.6
|
21.0
|
1.0
|
|
HB3
|
A:SER143
|
2.6
|
22.0
|
1.0
|
|
HD2
|
A:PRO142
|
2.8
|
18.7
|
1.0
|
|
N
|
A:SER143
|
3.1
|
19.9
|
1.0
|
|
CB
|
A:SER143
|
3.3
|
21.5
|
1.0
|
|
HB2
|
A:PRO142
|
3.5
|
18.6
|
1.0
|
|
OG
|
A:SER143
|
3.5
|
23.5
|
1.0
|
|
CB
|
A:THR141
|
3.5
|
21.6
|
1.0
|
|
CD
|
A:PRO142
|
3.6
|
18.9
|
1.0
|
|
N
|
A:PRO142
|
3.6
|
18.8
|
1.0
|
|
HG
|
A:SER143
|
3.7
|
25.9
|
0.0
|
|
CA
|
A:SER143
|
3.8
|
21.5
|
1.0
|
|
HG1
|
A:THR141
|
3.8
|
20.1
|
0.0
|
|
OG1
|
A:THR141
|
3.9
|
18.4
|
1.0
|
|
C
|
A:THR141
|
4.0
|
19.8
|
1.0
|
|
C
|
A:PRO142
|
4.0
|
19.9
|
1.0
|
|
HA
|
A:SER143
|
4.1
|
21.1
|
1.0
|
|
CB
|
A:PRO142
|
4.1
|
18.9
|
1.0
|
|
CA
|
A:PRO142
|
4.2
|
18.5
|
1.0
|
|
HB2
|
A:SER143
|
4.2
|
22.0
|
1.0
|
|
O
|
A:HOH564
|
4.2
|
37.1
|
1.0
|
|
HD3
|
A:PRO142
|
4.3
|
18.7
|
1.0
|
|
CA
|
A:THR141
|
4.3
|
20.1
|
1.0
|
|
CG
|
A:PRO142
|
4.3
|
18.2
|
1.0
|
|
HG2
|
A:PRO142
|
4.4
|
18.5
|
1.0
|
|
HG22
|
A:THR141
|
4.5
|
22.8
|
1.0
|
|
HA
|
A:THR141
|
4.5
|
20.1
|
1.0
|
|
CG2
|
A:THR141
|
4.5
|
23.4
|
1.0
|
|
HG21
|
A:THR141
|
4.7
|
22.8
|
1.0
|
|
O
|
A:THR141
|
4.8
|
18.9
|
1.0
|
|
H
|
A:GLN144
|
4.9
|
21.0
|
1.0
|
|
Chlorine binding site 4 out
of 10 in 7s6g
Go back to
Chlorine Binding Sites List in 7s6g
Chlorine binding site 4 out
of 10 in the Crystal Structure of Phnd From Synechococcus MITS9220 in Complex with Phosphate
 Mono view
 Stereo pair view
|
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 4 of Crystal Structure of Phnd From Synechococcus MITS9220 in Complex with Phosphate within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl304
b:38.1
occ:1.00
|
H
|
A:ALA150
|
2.3
|
20.6
|
1.0
|
|
HB2
|
A:ARG149
|
2.6
|
23.4
|
1.0
|
|
HB2
|
A:PRO142
|
3.1
|
18.6
|
1.0
|
|
HB3
|
A:PRO142
|
3.1
|
18.6
|
1.0
|
|
N
|
A:ALA150
|
3.2
|
21.1
|
1.0
|
|
HA
|
A:ARG149
|
3.2
|
22.7
|
1.0
|
|
O
|
A:HOH564
|
3.2
|
37.1
|
1.0
|
|
HB3
|
A:ALA150
|
3.3
|
18.0
|
1.0
|
|
CB
|
A:ARG149
|
3.5
|
22.8
|
1.0
|
|
HZ
|
A:PHE152
|
3.6
|
18.9
|
1.0
|
|
HE2
|
A:PHE152
|
3.6
|
19.6
|
1.0
|
|
CB
|
A:PRO142
|
3.6
|
18.9
|
1.0
|
|
CA
|
A:ARG149
|
3.7
|
22.7
|
1.0
|
|
C
|
A:ARG149
|
3.9
|
21.3
|
1.0
|
|
CB
|
A:ALA150
|
4.0
|
17.6
|
1.0
|
|
HB3
|
A:ARG149
|
4.0
|
23.4
|
1.0
|
|
HB2
|
A:ALA150
|
4.0
|
18.0
|
1.0
|
|
O
|
A:ALA150
|
4.1
|
17.2
|
1.0
|
|
CA
|
A:ALA150
|
4.1
|
18.9
|
1.0
|
|
CZ
|
A:PHE152
|
4.1
|
19.4
|
1.0
|
|
CE2
|
A:PHE152
|
4.1
|
19.6
|
1.0
|
|
HG2
|
A:PRO142
|
4.2
|
18.5
|
1.0
|
|
HG3
|
A:ARG149
|
4.4
|
25.5
|
1.0
|
|
CG
|
A:PRO142
|
4.5
|
18.2
|
1.0
|
|
C
|
A:ALA150
|
4.6
|
18.3
|
1.0
|
|
CG
|
A:ARG149
|
4.6
|
25.4
|
1.0
|
|
HE2
|
A:PHE119
|
4.6
|
16.2
|
1.0
|
|
HB1
|
A:ALA150
|
4.8
|
18.0
|
1.0
|
|
CA
|
A:PRO142
|
4.8
|
18.5
|
1.0
|
|
C
|
A:PRO142
|
4.9
|
19.9
|
1.0
|
|
HA
|
A:ALA150
|
4.9
|
18.9
|
1.0
|
|
HG3
|
A:PRO142
|
5.0
|
18.5
|
1.0
|
|
Chlorine binding site 5 out
of 10 in 7s6g
Go back to
Chlorine Binding Sites List in 7s6g
Chlorine binding site 5 out
of 10 in the Crystal Structure of Phnd From Synechococcus MITS9220 in Complex with Phosphate
 Mono view
 Stereo pair view
|
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 5 of Crystal Structure of Phnd From Synechococcus MITS9220 in Complex with Phosphate within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl305
b:31.9
occ:1.00
|
HH11
|
A:ARG31
|
2.2
|
19.2
|
1.0
|
|
HA
|
A:ALA227
|
2.7
|
13.8
|
1.0
|
|
HB3
|
A:ARG31
|
2.8
|
15.5
|
1.0
|
|
O
|
A:HOH421
|
2.8
|
21.1
|
1.0
|
|
O
|
A:HOH527
|
2.9
|
16.9
|
1.0
|
|
NH1
|
A:ARG31
|
3.0
|
19.5
|
1.0
|
|
HD3
|
A:ARG31
|
3.1
|
18.1
|
1.0
|
|
HH12
|
A:ARG31
|
3.3
|
19.2
|
1.0
|
|
HG2
|
A:ARG31
|
3.4
|
16.5
|
1.0
|
|
CA
|
A:ALA227
|
3.6
|
13.4
|
1.0
|
|
HB2
|
A:ALA227
|
3.6
|
13.6
|
1.0
|
|
CB
|
A:ARG31
|
3.6
|
15.1
|
1.0
|
|
CG
|
A:ARG31
|
3.8
|
16.5
|
1.0
|
|
CD
|
A:ARG31
|
3.8
|
18.4
|
1.0
|
|
CB
|
A:ALA227
|
3.9
|
13.8
|
1.0
|
|
HB1
|
A:ALA227
|
4.0
|
13.6
|
1.0
|
|
CZ
|
A:ARG31
|
4.1
|
18.6
|
1.0
|
|
N
|
A:ALA227
|
4.2
|
15.0
|
1.0
|
|
O
|
A:ARG31
|
4.3
|
12.3
|
1.0
|
|
HB2
|
A:ARG31
|
4.3
|
15.5
|
1.0
|
|
HA
|
A:ARG31
|
4.4
|
15.1
|
1.0
|
|
NE
|
A:ARG31
|
4.4
|
19.2
|
1.0
|
|
O
|
A:LYS226
|
4.4
|
12.5
|
1.0
|
|
CA
|
A:ARG31
|
4.5
|
15.4
|
1.0
|
|
O
|
A:HOH651
|
4.5
|
36.5
|
1.0
|
|
C
|
A:LYS226
|
4.5
|
14.7
|
1.0
|
|
H
|
A:ALA227
|
4.6
|
14.6
|
1.0
|
|
HD2
|
A:ARG31
|
4.6
|
18.1
|
1.0
|
|
C
|
A:ARG31
|
4.7
|
15.2
|
1.0
|
|
HA3
|
A:GLY230
|
4.7
|
15.2
|
1.0
|
|
HG3
|
A:ARG31
|
4.7
|
16.5
|
1.0
|
|
C
|
A:ALA227
|
4.7
|
13.7
|
1.0
|
|
O
|
A:HOH567
|
4.8
|
33.4
|
1.0
|
|
O
|
A:ALA227
|
4.8
|
14.4
|
1.0
|
|
HB3
|
A:LYS226
|
4.8
|
19.5
|
1.0
|
|
HB3
|
A:ALA227
|
4.9
|
13.7
|
1.0
|
|
O
|
A:HOH546
|
4.9
|
17.8
|
1.0
|
|
Chlorine binding site 6 out
of 10 in 7s6g
Go back to
Chlorine Binding Sites List in 7s6g
Chlorine binding site 6 out
of 10 in the Crystal Structure of Phnd From Synechococcus MITS9220 in Complex with Phosphate
 Mono view
 Stereo pair view
|
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 6 of Crystal Structure of Phnd From Synechococcus MITS9220 in Complex with Phosphate within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl306
b:57.9
occ:1.00
|
HH11
|
A:ARG37
|
2.1
|
45.3
|
1.0
|
|
HD3
|
A:ARG3
|
2.6
|
37.1
|
1.0
|
|
HE
|
A:ARG3
|
2.8
|
45.0
|
1.0
|
|
HB2
|
A:ARG37
|
2.8
|
21.6
|
1.0
|
|
HB3
|
A:ARG3
|
2.9
|
23.5
|
1.0
|
|
NH1
|
A:ARG37
|
2.9
|
46.4
|
1.0
|
|
HG2
|
A:ARG3
|
3.1
|
30.4
|
1.0
|
|
HH12
|
A:ARG37
|
3.1
|
45.3
|
1.0
|
|
HD3
|
A:ARG37
|
3.1
|
35.3
|
1.0
|
|
CD
|
A:ARG3
|
3.2
|
35.5
|
1.0
|
|
NE
|
A:ARG3
|
3.3
|
47.1
|
1.0
|
|
HB3
|
A:LYS35
|
3.3
|
22.5
|
1.0
|
|
CG
|
A:ARG3
|
3.4
|
32.2
|
1.0
|
|
CB
|
A:ARG3
|
3.6
|
23.1
|
1.0
|
|
CB
|
A:ARG37
|
3.7
|
21.4
|
1.0
|
|
HB3
|
A:ARG37
|
3.7
|
21.6
|
1.0
|
|
HG2
|
A:LYS35
|
3.8
|
29.5
|
1.0
|
|
HG3
|
A:LYS35
|
3.9
|
29.4
|
1.0
|
|
CD
|
A:ARG37
|
4.0
|
35.3
|
1.0
|
|
CZ
|
A:ARG37
|
4.1
|
44.4
|
1.0
|
|
HD2
|
A:ARG3
|
4.1
|
37.2
|
1.0
|
|
CB
|
A:LYS35
|
4.2
|
21.9
|
1.0
|
|
CG
|
A:LYS35
|
4.2
|
30.4
|
1.0
|
|
HB2
|
A:ARG3
|
4.2
|
23.5
|
1.0
|
|
HG3
|
A:ARG3
|
4.4
|
30.4
|
1.0
|
|
CG
|
A:ARG37
|
4.4
|
29.6
|
1.0
|
|
NE
|
A:ARG37
|
4.5
|
42.1
|
1.0
|
|
N
|
A:ARG37
|
4.5
|
13.0
|
1.0
|
|
CZ
|
A:ARG3
|
4.5
|
50.4
|
1.0
|
|
HA
|
A:ARG3
|
4.6
|
17.9
|
1.0
|
|
C
|
A:VAL36
|
4.6
|
15.2
|
1.0
|
|
H
|
A:ARG37
|
4.7
|
14.1
|
1.0
|
|
CA
|
A:ARG3
|
4.7
|
17.7
|
1.0
|
|
CA
|
A:ARG37
|
4.7
|
16.0
|
1.0
|
|
HH11
|
A:ARG3
|
4.7
|
49.0
|
1.0
|
|
O
|
A:VAL36
|
4.7
|
15.6
|
1.0
|
|
HD2
|
A:ARG37
|
4.7
|
35.3
|
1.0
|
|
N
|
A:VAL36
|
4.7
|
14.2
|
1.0
|
|
C
|
A:LYS35
|
4.8
|
13.7
|
1.0
|
|
HG3
|
A:ARG37
|
4.8
|
28.6
|
1.0
|
|
HB2
|
A:LYS35
|
4.8
|
22.4
|
1.0
|
|
H
|
A:VAL36
|
4.8
|
13.9
|
1.0
|
|
HA
|
A:ARG37
|
5.0
|
15.8
|
1.0
|
|
CA
|
A:LYS35
|
5.0
|
17.6
|
1.0
|
|
Chlorine binding site 7 out
of 10 in 7s6g
Go back to
Chlorine Binding Sites List in 7s6g
Chlorine binding site 7 out
of 10 in the Crystal Structure of Phnd From Synechococcus MITS9220 in Complex with Phosphate
 Mono view
 Stereo pair view
|
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 7 of Crystal Structure of Phnd From Synechococcus MITS9220 in Complex with Phosphate within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl307
b:52.1
occ:1.00
|
HH22
|
A:ARG37
|
2.4
|
42.2
|
1.0
|
|
HH12
|
A:ARG37
|
2.5
|
45.3
|
1.0
|
|
O
|
A:HOH463
|
2.8
|
38.3
|
1.0
|
|
HB2
|
A:ARG3
|
3.0
|
23.5
|
1.0
|
|
HD3
|
A:LYS5
|
3.1
|
22.4
|
1.0
|
|
NH2
|
A:ARG37
|
3.3
|
41.3
|
1.0
|
|
NH1
|
A:ARG37
|
3.3
|
46.4
|
1.0
|
|
HD3
|
A:ARG3
|
3.3
|
37.1
|
1.0
|
|
HD2
|
A:ARG3
|
3.5
|
37.2
|
1.0
|
|
CZ
|
A:ARG37
|
3.7
|
44.4
|
1.0
|
|
CB
|
A:ARG3
|
3.8
|
23.1
|
1.0
|
|
CD
|
A:ARG3
|
3.8
|
35.5
|
1.0
|
|
HB3
|
A:ARG3
|
3.9
|
23.5
|
1.0
|
|
HZ1
|
A:LYS5
|
3.9
|
29.3
|
1.0
|
|
HH21
|
A:ARG37
|
4.0
|
42.2
|
1.0
|
|
CD
|
A:LYS5
|
4.0
|
22.2
|
1.0
|
|
HH11
|
A:ARG37
|
4.0
|
45.3
|
1.0
|
|
HG2
|
A:LYS5
|
4.1
|
19.1
|
1.0
|
|
HG3
|
A:LYS5
|
4.2
|
19.1
|
1.0
|
|
CG
|
A:ARG3
|
4.3
|
32.2
|
1.0
|
|
CG
|
A:LYS5
|
4.4
|
19.1
|
1.0
|
|
HD2
|
A:LYS5
|
4.6
|
22.4
|
1.0
|
|
HG3
|
A:ARG3
|
4.7
|
30.4
|
1.0
|
|
O
|
A:ARG3
|
4.7
|
14.3
|
1.0
|
|
NZ
|
A:LYS5
|
4.7
|
30.5
|
1.0
|
|
CE
|
A:LYS5
|
4.8
|
27.0
|
1.0
|
|
HE3
|
A:LYS5
|
4.8
|
26.5
|
1.0
|
|
O
|
A:HOH596
|
4.8
|
23.1
|
1.0
|
|
H
|
A:ARG3
|
5.0
|
17.0
|
1.0
|
|
O
|
A:HOH411
|
5.0
|
33.8
|
1.0
|
|
Chlorine binding site 8 out
of 10 in 7s6g
Go back to
Chlorine Binding Sites List in 7s6g
Chlorine binding site 8 out
of 10 in the Crystal Structure of Phnd From Synechococcus MITS9220 in Complex with Phosphate
 Mono view
 Stereo pair view
|
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 8 of Crystal Structure of Phnd From Synechococcus MITS9220 in Complex with Phosphate within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl308
b:50.9
occ:1.00
|
HE22
|
A:GLN72
|
2.2
|
21.4
|
1.0
|
|
O
|
A:HOH604
|
2.6
|
26.6
|
1.0
|
|
HG2
|
A:GLN68
|
3.1
|
17.7
|
1.0
|
|
NE2
|
A:GLN72
|
3.1
|
21.7
|
1.0
|
|
HA
|
A:GLN68
|
3.2
|
16.2
|
1.0
|
|
HG23
|
A:ILE271
|
3.2
|
30.1
|
1.0
|
|
HG3
|
A:GLN72
|
3.4
|
20.1
|
1.0
|
|
HB3
|
A:GLN68
|
3.4
|
17.1
|
1.0
|
|
HE21
|
A:GLN72
|
3.5
|
21.4
|
1.0
|
|
H
|
A:ARG272
|
3.5
|
47.5
|
1.0
|
|
HG3
|
A:ARG272
|
3.7
|
63.5
|
1.0
|
|
HB2
|
A:LEU71
|
3.8
|
22.2
|
1.0
|
|
HA
|
A:ILE271
|
3.8
|
30.1
|
1.0
|
|
HD11
|
A:LEU71
|
3.8
|
24.2
|
1.0
|
|
HE
|
A:ARG272
|
3.8
|
71.0
|
1.0
|
|
CG
|
A:GLN68
|
3.9
|
17.2
|
1.0
|
|
CB
|
A:GLN68
|
3.9
|
17.5
|
1.0
|
|
CA
|
A:GLN68
|
3.9
|
16.2
|
1.0
|
|
HD13
|
A:LEU71
|
4.0
|
24.2
|
1.0
|
|
CD
|
A:GLN72
|
4.0
|
20.8
|
1.0
|
|
CG
|
A:GLN72
|
4.1
|
20.1
|
1.0
|
|
HD2
|
A:ARG272
|
4.1
|
68.0
|
1.0
|
|
HG12
|
A:ILE271
|
4.1
|
28.0
|
1.0
|
|
O
|
A:GLN68
|
4.2
|
14.8
|
1.0
|
|
CG2
|
A:ILE271
|
4.2
|
30.6
|
1.0
|
|
HG2
|
A:GLN72
|
4.2
|
20.1
|
1.0
|
|
HB2
|
A:ARG272
|
4.3
|
60.2
|
1.0
|
|
CD1
|
A:LEU71
|
4.4
|
24.4
|
1.0
|
|
HB3
|
A:LEU71
|
4.4
|
22.2
|
1.0
|
|
NE
|
A:ARG272
|
4.4
|
72.9
|
1.0
|
|
N
|
A:ARG272
|
4.4
|
47.4
|
1.0
|
|
CG
|
A:ARG272
|
4.4
|
64.6
|
1.0
|
|
HE22
|
A:GLN68
|
4.5
|
21.1
|
1.0
|
|
HG3
|
A:GLN68
|
4.5
|
17.7
|
1.0
|
|
CD
|
A:ARG272
|
4.5
|
67.7
|
1.0
|
|
CB
|
A:LEU71
|
4.5
|
22.7
|
1.0
|
|
O
|
A:HOH562
|
4.5
|
28.9
|
1.0
|
|
C
|
A:GLN68
|
4.5
|
17.6
|
1.0
|
|
CA
|
A:ILE271
|
4.6
|
29.0
|
1.0
|
|
HG21
|
A:ILE271
|
4.6
|
30.1
|
1.0
|
|
HG22
|
A:ILE271
|
4.7
|
30.1
|
1.0
|
|
CD
|
A:GLN68
|
4.8
|
19.3
|
1.0
|
|
CB
|
A:ILE271
|
4.8
|
28.9
|
1.0
|
|
CB
|
A:ARG272
|
4.8
|
58.5
|
1.0
|
|
HB2
|
A:GLN68
|
4.8
|
17.1
|
1.0
|
|
NE2
|
A:GLN68
|
4.9
|
22.0
|
1.0
|
|
CG1
|
A:ILE271
|
4.9
|
27.4
|
1.0
|
|
Chlorine binding site 9 out
of 10 in 7s6g
Go back to
Chlorine Binding Sites List in 7s6g
Chlorine binding site 9 out
of 10 in the Crystal Structure of Phnd From Synechococcus MITS9220 in Complex with Phosphate
 Mono view
 Stereo pair view
|
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 9 of Crystal Structure of Phnd From Synechococcus MITS9220 in Complex with Phosphate within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl309
b:50.8
occ:1.00
|
HE2
|
A:HIS205
|
2.0
|
13.2
|
0.0
|
|
HE
|
A:ARG70
|
2.1
|
30.8
|
1.0
|
|
HH21
|
A:ARG70
|
2.3
|
35.7
|
1.0
|
|
NE
|
A:ARG70
|
2.8
|
28.3
|
1.0
|
|
NE2
|
A:HIS205
|
2.8
|
11.9
|
1.0
|
|
O
|
A:GLY66
|
2.8
|
13.1
|
1.0
|
|
NH2
|
A:ARG70
|
2.9
|
35.5
|
1.0
|
|
HG21
|
A:VAL78
|
3.1
|
19.4
|
1.0
|
|
C
|
A:GLY66
|
3.1
|
13.0
|
1.0
|
|
HA
|
A:VAL67
|
3.1
|
13.8
|
1.0
|
|
CZ
|
A:ARG70
|
3.2
|
36.7
|
1.0
|
|
HB2
|
A:ARG70
|
3.3
|
20.9
|
1.0
|
|
HB3
|
A:ARG70
|
3.3
|
20.9
|
1.0
|
|
HG22
|
A:VAL78
|
3.4
|
19.5
|
1.0
|
|
N
|
A:VAL67
|
3.5
|
13.1
|
1.0
|
|
HG22
|
A:VAL207
|
3.6
|
11.7
|
1.0
|
|
CG2
|
A:VAL78
|
3.6
|
19.1
|
1.0
|
|
HA3
|
A:GLY66
|
3.6
|
12.0
|
1.0
|
|
CD2
|
A:HIS205
|
3.7
|
13.2
|
1.0
|
|
HH22
|
A:ARG70
|
3.7
|
35.7
|
1.0
|
|
HD2
|
A:HIS205
|
3.7
|
12.7
|
1.0
|
|
HG21
|
A:VAL207
|
3.7
|
11.8
|
1.0
|
|
CB
|
A:ARG70
|
3.7
|
20.4
|
1.0
|
|
HG23
|
A:VAL78
|
3.7
|
19.5
|
1.0
|
|
CA
|
A:VAL67
|
3.8
|
13.5
|
1.0
|
|
CE1
|
A:HIS205
|
3.8
|
12.3
|
1.0
|
|
CA
|
A:GLY66
|
3.9
|
11.9
|
1.0
|
|
CD
|
A:ARG70
|
4.0
|
29.8
|
1.0
|
|
HE1
|
A:HIS205
|
4.0
|
12.2
|
1.0
|
|
HG21
|
A:VAL67
|
4.1
|
15.4
|
1.0
|
|
H
|
A:VAL67
|
4.1
|
13.2
|
1.0
|
|
HD3
|
A:ARG70
|
4.1
|
28.3
|
1.0
|
|
CG2
|
A:VAL207
|
4.1
|
11.7
|
1.0
|
|
HG23
|
A:VAL67
|
4.1
|
15.3
|
1.0
|
|
H
|
A:ARG70
|
4.2
|
17.7
|
1.0
|
|
HA2
|
A:GLY66
|
4.3
|
12.0
|
1.0
|
|
NH1
|
A:ARG70
|
4.5
|
41.9
|
1.0
|
|
CG
|
A:ARG70
|
4.5
|
25.0
|
1.0
|
|
CG2
|
A:VAL67
|
4.5
|
15.7
|
1.0
|
|
HD2
|
A:TYR258
|
4.6
|
18.1
|
1.0
|
|
HG23
|
A:VAL207
|
4.6
|
11.7
|
1.0
|
|
CD2
|
A:TYR258
|
4.7
|
17.5
|
1.0
|
|
HG12
|
A:VAL207
|
4.7
|
12.4
|
1.0
|
|
HD2
|
A:ARG70
|
4.8
|
28.3
|
1.0
|
|
HG13
|
A:VAL207
|
4.8
|
12.4
|
1.0
|
|
C
|
A:VAL67
|
4.8
|
14.4
|
1.0
|
|
CB
|
A:VAL67
|
4.8
|
14.7
|
1.0
|
|
CG
|
A:TYR258
|
4.9
|
18.4
|
1.0
|
|
CG
|
A:HIS205
|
4.9
|
12.4
|
1.0
|
|
HG2
|
A:ARG70
|
4.9
|
24.9
|
1.0
|
|
HB2
|
A:TYR258
|
4.9
|
17.0
|
1.0
|
|
N
|
A:ARG70
|
4.9
|
17.1
|
1.0
|
|
ND1
|
A:HIS205
|
4.9
|
11.9
|
1.0
|
|
HH11
|
A:ARG70
|
4.9
|
39.4
|
1.0
|
|
HH12
|
A:ARG70
|
5.0
|
39.5
|
1.0
|
|
CA
|
A:ARG70
|
5.0
|
18.4
|
1.0
|
|
Chlorine binding site 10 out
of 10 in 7s6g
Go back to
Chlorine Binding Sites List in 7s6g
Chlorine binding site 10 out
of 10 in the Crystal Structure of Phnd From Synechococcus MITS9220 in Complex with Phosphate
 Mono view
 Stereo pair view
|
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 10 of Crystal Structure of Phnd From Synechococcus MITS9220 in Complex with Phosphate within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl310
b:61.6
occ:1.00
|
HG2
|
A:ARG149
|
3.4
|
25.5
|
1.0
|
|
O
|
A:ARG149
|
3.5
|
20.0
|
1.0
|
|
HE2
|
A:TYR168
|
3.6
|
21.0
|
1.0
|
|
HG3
|
A:ARG149
|
3.6
|
25.5
|
1.0
|
|
O
|
A:HOH512
|
3.6
|
16.2
|
1.0
|
|
HE
|
A:ARG149
|
3.6
|
35.2
|
1.0
|
|
CG
|
A:ARG149
|
4.0
|
25.4
|
1.0
|
|
O
|
A:SER146
|
4.0
|
24.8
|
1.0
|
|
HA3
|
A:GLY147
|
4.1
|
24.9
|
1.0
|
|
OH
|
A:TYR168
|
4.2
|
24.4
|
1.0
|
|
H
|
A:GLY151
|
4.2
|
16.9
|
1.0
|
|
N
|
A:GLY151
|
4.2
|
17.2
|
1.0
|
|
C
|
A:ARG149
|
4.3
|
21.3
|
1.0
|
|
NE
|
A:ARG149
|
4.3
|
35.6
|
1.0
|
|
C
|
A:ALA150
|
4.3
|
18.3
|
1.0
|
|
CE2
|
A:TYR168
|
4.4
|
21.1
|
1.0
|
|
HA2
|
A:GLY151
|
4.4
|
15.3
|
1.0
|
|
O
|
A:ALA150
|
4.5
|
17.2
|
1.0
|
|
H
|
A:ARG149
|
4.5
|
23.8
|
1.0
|
|
HH21
|
A:ARG149
|
4.6
|
41.1
|
1.0
|
|
HA
|
A:ALA150
|
4.7
|
18.9
|
1.0
|
|
CA
|
A:GLY151
|
4.7
|
15.2
|
1.0
|
|
CZ
|
A:TYR168
|
4.8
|
21.6
|
1.0
|
|
CD
|
A:ARG149
|
4.8
|
29.0
|
1.0
|
|
HA3
|
A:GLY151
|
4.8
|
15.3
|
1.0
|
|
HH
|
A:TYR168
|
4.9
|
26.3
|
0.0
|
|
CA
|
A:ALA150
|
4.9
|
18.9
|
1.0
|
|
O
|
A:HOH402
|
5.0
|
42.9
|
1.0
|
|
N
|
A:ALA150
|
5.0
|
21.1
|
1.0
|
|
CA
|
A:GLY147
|
5.0
|
24.6
|
1.0
|
|
Reference:
B.S.Shah,
H.Mikolajek,
C.M.Orr,
V.Mykhaylyk,
R.Owens,
I.T.Paulsen.
Crystal Structure of Phnd From Synechococcus MITS9220 in Complex with Phosphate To Be Published.
Page generated: Sun Jul 13 06:59:39 2025
|
