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Chlorine in PDB 8dsy: Pparg Bound to Inverse Agonist H3B-343

Protein crystallography data

The structure of Pparg Bound to Inverse Agonist H3B-343, PDB code: 8dsy was solved by N.A.Larsen, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 49.51 / 2.95
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 91.758, 63.503, 118.333, 90, 101.4, 90
R / Rfree (%) 19.8 / 26.7

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Pparg Bound to Inverse Agonist H3B-343 (pdb code 8dsy). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Pparg Bound to Inverse Agonist H3B-343, PDB code: 8dsy:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 8dsy

Go back to Chlorine Binding Sites List in 8dsy
Chlorine binding site 1 out of 2 in the Pparg Bound to Inverse Agonist H3B-343


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Pparg Bound to Inverse Agonist H3B-343 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl601

b:98.9
occ:1.00
CL1 A:TJC601 0.0 98.9 1.0
C15 A:TJC601 1.7 87.1 1.0
C14 A:TJC601 2.7 82.5 1.0
C16 A:TJC601 2.7 85.9 1.0
O1 A:TJC601 2.9 83.4 1.0
CG2 A:ILE309 3.8 125.9 1.0
C13 A:TJC601 4.0 80.9 1.0
C19 A:TJC601 4.0 84.9 1.0
O A:ILE309 4.1 122.7 1.0
CD1 A:ILE309 4.1 114.3 1.0
CE A:MET376 4.2 77.4 1.0
C17 A:TJC601 4.2 89.0 1.0
CA A:ILE309 4.4 122.0 1.0
SD A:MET376 4.4 78.9 1.0
C12 A:TJC601 4.5 86.3 1.0
CG2 A:ILE369 4.5 71.3 1.0
CB A:ILE309 4.5 126.4 1.0
C A:ILE309 4.6 119.5 1.0
N A:CYS313 4.8 94.7 1.0
CG1 A:ILE309 4.9 120.5 1.0
CB A:CYS313 4.9 94.0 1.0
CB A:ILE369 4.9 76.8 1.0
CD1 A:ILE369 5.0 88.7 1.0

Chlorine binding site 2 out of 2 in 8dsy

Go back to Chlorine Binding Sites List in 8dsy
Chlorine binding site 2 out of 2 in the Pparg Bound to Inverse Agonist H3B-343


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Pparg Bound to Inverse Agonist H3B-343 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl601

b:76.1
occ:1.00
CL1 B:TJC601 0.0 76.1 1.0
C15 B:TJC601 1.8 66.0 1.0
C14 B:TJC601 2.7 63.2 1.0
C16 B:TJC601 2.8 65.9 1.0
O1 B:TJC601 3.0 68.1 1.0
CG2 B:ILE309 3.6 84.8 1.0
CE B:MET376 3.7 73.5 1.0
O B:ILE309 3.9 76.5 1.0
CA B:ILE309 4.0 77.8 1.0
CG1 B:ILE309 4.0 81.8 1.0
CB B:ILE309 4.0 82.6 1.0
C13 B:TJC601 4.0 65.2 1.0
C19 B:TJC601 4.1 66.8 1.0
SG B:CYS313 4.3 70.7 1.0
C17 B:TJC601 4.3 78.2 1.0
C B:ILE309 4.3 76.5 1.0
SD B:MET376 4.4 76.1 1.0
C12 B:TJC601 4.6 65.8 1.0
CG2 B:ILE369 4.7 69.5 1.0
N B:CYS313 4.9 76.0 1.0
O2 B:TJC601 5.0 82.6 1.0

Reference:

N.A.Larsen, N.A.Larsen. N/A N/A.
Page generated: Sun Jul 13 10:53:32 2025

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