Chlorine in PDB 9fqb: Crystal Structure of CLY21-HNP1
Protein crystallography data
The structure of Crystal Structure of CLY21-HNP1, PDB code: 9fqb
was solved by
S.Becker,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
31.49 /
1.09
|
Space group
|
P 31 2 1
|
Cell size a, b, c (Å), α, β, γ (°)
|
46.075,
46.075,
51.282,
90,
90,
120
|
R / Rfree (%)
|
11.1 /
12.2
|
Chlorine Binding Sites:
The binding sites of Chlorine atom in the Crystal Structure of CLY21-HNP1
(pdb code 9fqb). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the
Crystal Structure of CLY21-HNP1, PDB code: 9fqb:
Jump to Chlorine binding site number:
1;
2;
3;
Chlorine binding site 1 out
of 3 in 9fqb
Go back to
Chlorine Binding Sites List in 9fqb
Chlorine binding site 1 out
of 3 in the Crystal Structure of CLY21-HNP1
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of Crystal Structure of CLY21-HNP1 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl21
b:15.2
occ:0.28
|
CL
|
A:3CT21
|
0.0
|
15.2
|
0.3
|
CE2
|
A:3CT21
|
1.7
|
14.2
|
0.3
|
CL
|
A:3CT21
|
1.8
|
17.1
|
0.4
|
HH
|
A:3CT21
|
2.6
|
16.4
|
0.3
|
CZ
|
A:3CT21
|
2.7
|
13.5
|
0.3
|
CD2
|
A:3CT21
|
2.7
|
13.7
|
0.3
|
HD2
|
A:3CT21
|
2.8
|
16.4
|
0.3
|
OH
|
A:3CT21
|
2.9
|
13.7
|
0.3
|
HD2
|
A:3CT21
|
2.9
|
17.8
|
0.7
|
CE2
|
A:3CT21
|
3.0
|
16.8
|
0.7
|
CD2
|
A:3CT21
|
3.3
|
14.8
|
0.7
|
HH2
|
A:TRP26
|
3.4
|
14.6
|
1.0
|
CH2
|
A:TRP26
|
3.6
|
12.1
|
1.0
|
CE1
|
A:3CT21
|
4.0
|
12.9
|
0.3
|
CG
|
A:3CT21
|
4.0
|
13.0
|
0.3
|
CZ2
|
A:TRP26
|
4.1
|
11.3
|
1.0
|
HZ2
|
A:TRP26
|
4.1
|
13.6
|
1.0
|
CZ3
|
A:TRP26
|
4.2
|
12.0
|
1.0
|
HD2
|
B:TYR16
|
4.2
|
16.3
|
1.0
|
CZ
|
A:3CT21
|
4.3
|
17.3
|
0.7
|
HZ3
|
A:TRP26
|
4.3
|
14.4
|
1.0
|
HG3
|
A:GLN22
|
4.4
|
30.7
|
1.0
|
O
|
A:HOH201
|
4.4
|
36.0
|
0.8
|
CD1
|
A:3CT21
|
4.5
|
12.6
|
0.3
|
HE1
|
A:3CT21
|
4.7
|
15.5
|
0.3
|
CG
|
A:3CT21
|
4.7
|
13.8
|
0.7
|
OH
|
A:3CT21
|
4.8
|
19.1
|
0.7
|
CE2
|
A:TRP26
|
4.9
|
10.3
|
1.0
|
|
Chlorine binding site 2 out
of 3 in 9fqb
Go back to
Chlorine Binding Sites List in 9fqb
Chlorine binding site 2 out
of 3 in the Crystal Structure of CLY21-HNP1
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of Crystal Structure of CLY21-HNP1 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl21
b:17.1
occ:0.44
|
CL
|
A:3CT21
|
0.0
|
17.1
|
0.4
|
CE2
|
A:3CT21
|
1.5
|
14.2
|
0.3
|
CZ
|
A:3CT21
|
1.5
|
13.5
|
0.3
|
OH
|
A:3CT21
|
1.7
|
13.7
|
0.3
|
CE2
|
A:3CT21
|
1.7
|
16.8
|
0.7
|
CL
|
A:3CT21
|
1.8
|
15.2
|
0.3
|
HH
|
A:3CT21
|
1.9
|
16.4
|
0.3
|
CD2
|
A:3CT21
|
2.7
|
14.8
|
0.7
|
CD2
|
A:3CT21
|
2.7
|
13.7
|
0.3
|
HD2
|
A:3CT21
|
2.7
|
17.8
|
0.7
|
CE1
|
A:3CT21
|
2.8
|
12.9
|
0.3
|
CZ
|
A:3CT21
|
2.8
|
17.3
|
0.7
|
HG3
|
A:GLN22
|
3.0
|
30.7
|
1.0
|
OH
|
A:3CT21
|
3.1
|
19.1
|
0.7
|
O
|
A:HOH201
|
3.2
|
36.0
|
0.8
|
HD2
|
A:3CT21
|
3.3
|
16.4
|
0.3
|
HE1
|
A:3CT21
|
3.3
|
15.5
|
0.3
|
CD1
|
A:3CT21
|
3.6
|
12.6
|
0.3
|
CG
|
A:3CT21
|
3.6
|
13.0
|
0.3
|
HD2
|
B:TYR16
|
3.8
|
16.3
|
1.0
|
CG
|
A:GLN22
|
3.9
|
25.5
|
1.0
|
CD
|
A:GLN22
|
3.9
|
28.4
|
1.0
|
CG
|
A:3CT21
|
4.0
|
13.8
|
0.7
|
CE1
|
A:3CT21
|
4.1
|
15.8
|
0.7
|
NE2
|
A:GLN22
|
4.1
|
30.3
|
1.0
|
HE21
|
A:GLN22
|
4.1
|
36.4
|
1.0
|
HG2
|
A:GLN22
|
4.4
|
30.7
|
1.0
|
OE1
|
A:GLN22
|
4.4
|
30.4
|
1.0
|
HD1
|
A:3CT21
|
4.5
|
15.1
|
0.3
|
HE22
|
A:GLN22
|
4.5
|
36.4
|
1.0
|
HH2
|
A:TRP26
|
4.5
|
14.6
|
1.0
|
HZ2
|
A:TRP26
|
4.5
|
13.6
|
1.0
|
CD1
|
A:3CT21
|
4.5
|
14.7
|
0.7
|
HE2
|
B:TYR16
|
4.6
|
17.6
|
1.0
|
CD2
|
B:TYR16
|
4.6
|
13.6
|
1.0
|
HB2
|
A:GLN22
|
4.6
|
25.4
|
1.0
|
HE1
|
A:3CT21
|
4.8
|
19.0
|
0.7
|
CH2
|
A:TRP26
|
4.8
|
12.1
|
1.0
|
CZ2
|
A:TRP26
|
4.8
|
11.3
|
1.0
|
CB
|
A:GLN22
|
4.9
|
21.2
|
1.0
|
|
Chlorine binding site 3 out
of 3 in 9fqb
Go back to
Chlorine Binding Sites List in 9fqb
Chlorine binding site 3 out
of 3 in the Crystal Structure of CLY21-HNP1
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 3 of Crystal Structure of CLY21-HNP1 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl21
b:13.4
occ:0.97
|
CL
|
B:3CT21
|
0.0
|
13.4
|
1.0
|
CE2
|
B:3CT21
|
1.7
|
10.7
|
1.0
|
CZ
|
B:3CT21
|
2.7
|
10.6
|
1.0
|
CD2
|
B:3CT21
|
2.7
|
10.7
|
1.0
|
HD2
|
B:3CT21
|
2.8
|
12.8
|
1.0
|
OH
|
B:3CT21
|
3.0
|
11.1
|
1.0
|
CH2
|
B:TRP26
|
3.6
|
11.6
|
1.0
|
HH2
|
B:TRP26
|
3.6
|
13.9
|
1.0
|
HB2
|
B:CYS4
|
3.8
|
10.8
|
1.0
|
CZ2
|
B:TRP26
|
3.8
|
11.4
|
1.0
|
CE1
|
B:3CT21
|
4.0
|
10.8
|
1.0
|
HZ2
|
B:TRP26
|
4.0
|
13.8
|
1.0
|
CG
|
B:3CT21
|
4.0
|
10.3
|
1.0
|
CZ3
|
B:TRP26
|
4.1
|
11.8
|
1.0
|
HE22
|
B:GLN22
|
4.1
|
15.6
|
1.0
|
HZ3
|
B:TRP26
|
4.3
|
14.2
|
1.0
|
NE2
|
B:GLN22
|
4.3
|
13.0
|
1.0
|
HB2
|
B:GLN22
|
4.4
|
14.6
|
1.0
|
CE2
|
B:TRP26
|
4.4
|
10.0
|
1.0
|
CD1
|
B:3CT21
|
4.5
|
11.1
|
1.0
|
HE21
|
B:GLN22
|
4.6
|
15.6
|
1.0
|
OE1
|
B:GLN22
|
4.6
|
12.7
|
1.0
|
CE3
|
B:TRP26
|
4.6
|
10.1
|
1.0
|
O
|
B:HOH219
|
4.7
|
9.8
|
1.0
|
HE1
|
B:3CT21
|
4.7
|
13.0
|
1.0
|
CD
|
B:GLN22
|
4.7
|
12.2
|
1.0
|
CB
|
B:CYS4
|
4.7
|
9.0
|
1.0
|
CD2
|
B:TRP26
|
4.8
|
9.7
|
1.0
|
HE2
|
A:PHE28
|
4.9
|
13.4
|
1.0
|
HB3
|
B:GLN22
|
4.9
|
14.6
|
1.0
|
HZ
|
A:PHE28
|
5.0
|
12.3
|
1.0
|
HB3
|
B:CYS4
|
5.0
|
10.8
|
1.0
|
|
Reference:
S.Becker,
S.Becker.
N/A N/A.
Page generated: Sun Jul 13 16:49:55 2025
|