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Chlorine in PDB 186l: Specificity of Ligand Binding in A Buried Non-Polar Cavity of T4 Lysozyme: Linkage of Dynamics and Structural Plasticity

Enzymatic activity of Specificity of Ligand Binding in A Buried Non-Polar Cavity of T4 Lysozyme: Linkage of Dynamics and Structural Plasticity

All present enzymatic activity of Specificity of Ligand Binding in A Buried Non-Polar Cavity of T4 Lysozyme: Linkage of Dynamics and Structural Plasticity:
3.2.1.17;

Protein crystallography data

The structure of Specificity of Ligand Binding in A Buried Non-Polar Cavity of T4 Lysozyme: Linkage of Dynamics and Structural Plasticity, PDB code: 186l was solved by A.Morton, B.W.Matthews, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 1.80
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 60.900, 60.900, 97.000, 90.00, 90.00, 120.00
R / Rfree (%) n/a / n/a

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Specificity of Ligand Binding in A Buried Non-Polar Cavity of T4 Lysozyme: Linkage of Dynamics and Structural Plasticity (pdb code 186l). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Specificity of Ligand Binding in A Buried Non-Polar Cavity of T4 Lysozyme: Linkage of Dynamics and Structural Plasticity, PDB code: 186l:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 186l

Go back to Chlorine Binding Sites List in 186l
Chlorine binding site 1 out of 2 in the Specificity of Ligand Binding in A Buried Non-Polar Cavity of T4 Lysozyme: Linkage of Dynamics and Structural Plasticity


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Specificity of Ligand Binding in A Buried Non-Polar Cavity of T4 Lysozyme: Linkage of Dynamics and Structural Plasticity within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl173

b:34.1
occ:1.00
O A:HOH209 3.0 35.1 1.0
N A:ASN144 3.3 9.8 1.0
N A:ARG145 3.3 12.8 1.0
C A:THR142 3.5 16.0 1.0
CA A:THR142 3.5 10.0 1.0
CB A:THR142 3.6 18.6 1.0
CB A:ASN144 3.7 14.1 1.0
O A:THR142 3.8 15.9 1.0
CA A:ASN144 3.8 15.1 1.0
N A:PRO143 3.9 13.6 1.0
CB A:ARG145 4.0 15.0 1.0
C A:ASN144 4.1 22.6 1.0
CD A:PRO143 4.1 17.7 1.0
C A:PRO143 4.3 12.1 1.0
CA A:ARG145 4.3 12.7 1.0
CG2 A:THR142 4.3 15.7 1.0
CG A:ASN144 4.6 28.6 1.0
CA A:PRO143 4.6 11.5 1.0
O A:HOH230 4.7 33.6 1.0
ND2 A:ASN144 4.7 37.2 1.0
OG1 A:THR142 4.9 15.6 1.0
CG A:PRO143 4.9 15.5 1.0
N A:THR142 4.9 14.1 1.0

Chlorine binding site 2 out of 2 in 186l

Go back to Chlorine Binding Sites List in 186l
Chlorine binding site 2 out of 2 in the Specificity of Ligand Binding in A Buried Non-Polar Cavity of T4 Lysozyme: Linkage of Dynamics and Structural Plasticity


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Specificity of Ligand Binding in A Buried Non-Polar Cavity of T4 Lysozyme: Linkage of Dynamics and Structural Plasticity within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl178

b:35.8
occ:0.50
O A:HOH215 3.0 17.9 1.0
O A:HOH182 3.4 27.1 1.0
O A:HOH200 3.6 34.4 1.0
O A:HOH246 3.8 47.9 1.0
CB A:ALA49 3.9 18.2 1.0
CE1 A:HIS31 4.0 15.8 1.0
NE2 A:HIS31 4.2 14.7 1.0
O A:HOH282 4.2 37.1 1.0
CA A:ALA49 4.4 22.7 1.0
NE2 A:GLN69 4.5 18.8 1.0
O A:HOH202 4.5 63.1 1.0
CD2 A:LEU66 4.6 24.0 1.0

Reference:

A.Morton, B.W.Matthews. Specificity of Ligand Binding in A Buried Nonpolar Cavity of T4 Lysozyme: Linkage of Dynamics and Structural Plasticity. Biochemistry V. 34 8576 1995.
ISSN: ISSN 0006-2960
PubMed: 7612599
DOI: 10.1021/BI00027A007
Page generated: Sat Dec 12 08:31:13 2020

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