Chlorine in PDB 1c14: Crystal Structure of E Coli Enoyl Reductase-Nad+-Triclosan Complex
Enzymatic activity of Crystal Structure of E Coli Enoyl Reductase-Nad+-Triclosan Complex
All present enzymatic activity of Crystal Structure of E Coli Enoyl Reductase-Nad+-Triclosan Complex:
1.3.1.9;
Protein crystallography data
The structure of Crystal Structure of E Coli Enoyl Reductase-Nad+-Triclosan Complex, PDB code: 1c14
was solved by
X.Qiu,
C.Janson,
R.Court,
M.Smyth,
D.Payne,
S.Abdel-Meguid,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
7.00 /
2.00
|
Space group
|
P 61 2 2
|
Cell size a, b, c (Å), α, β, γ (°)
|
79.000,
79.000,
328.750,
90.00,
90.00,
120.00
|
R / Rfree (%)
|
19.9 /
26.3
|
Chlorine Binding Sites:
The binding sites of Chlorine atom in the Crystal Structure of E Coli Enoyl Reductase-Nad+-Triclosan Complex
(pdb code 1c14). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 6 binding sites of Chlorine where determined in the
Crystal Structure of E Coli Enoyl Reductase-Nad+-Triclosan Complex, PDB code: 1c14:
Jump to Chlorine binding site number:
1;
2;
3;
4;
5;
6;
Chlorine binding site 1 out
of 6 in 1c14
Go back to
Chlorine Binding Sites List in 1c14
Chlorine binding site 1 out
of 6 in the Crystal Structure of E Coli Enoyl Reductase-Nad+-Triclosan Complex
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of Crystal Structure of E Coli Enoyl Reductase-Nad+-Triclosan Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl502
b:9.1
occ:1.00
|
CL14
|
A:TCL502
|
0.0
|
9.1
|
1.0
|
C2
|
A:TCL502
|
1.7
|
21.8
|
1.0
|
C3
|
A:TCL502
|
2.7
|
28.0
|
1.0
|
C1
|
A:TCL502
|
2.7
|
27.3
|
1.0
|
CZ
|
A:TYR146
|
3.5
|
16.6
|
1.0
|
CE1
|
A:TYR146
|
3.5
|
15.9
|
1.0
|
CE1
|
A:PHE203
|
3.6
|
34.5
|
1.0
|
O7N
|
A:NAD501
|
3.7
|
19.4
|
1.0
|
CB
|
A:PRO191
|
3.8
|
20.5
|
1.0
|
OH
|
A:TYR146
|
3.8
|
22.3
|
1.0
|
CE2
|
A:TYR146
|
3.9
|
16.8
|
1.0
|
CD1
|
A:TYR146
|
3.9
|
16.2
|
1.0
|
C4
|
A:TCL502
|
4.0
|
29.1
|
1.0
|
C6
|
A:TCL502
|
4.0
|
25.9
|
1.0
|
CA
|
A:PRO191
|
4.1
|
22.4
|
1.0
|
SD
|
A:MET206
|
4.1
|
52.2
|
1.0
|
CD1
|
A:ILE200
|
4.2
|
34.2
|
1.0
|
CD2
|
A:TYR146
|
4.3
|
14.1
|
1.0
|
CG
|
A:TYR146
|
4.3
|
11.4
|
1.0
|
CD1
|
A:PHE203
|
4.4
|
34.9
|
1.0
|
C7N
|
A:NAD501
|
4.4
|
16.8
|
1.0
|
C4N
|
A:NAD501
|
4.5
|
15.8
|
1.0
|
CZ
|
A:PHE203
|
4.5
|
34.7
|
1.0
|
C5
|
A:TCL502
|
4.5
|
24.7
|
1.0
|
C3N
|
A:NAD501
|
4.6
|
17.3
|
1.0
|
N
|
A:PRO191
|
4.8
|
18.9
|
1.0
|
CG
|
A:PRO191
|
4.8
|
22.0
|
1.0
|
CD
|
A:PRO191
|
4.9
|
18.7
|
1.0
|
|
Chlorine binding site 2 out
of 6 in 1c14
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Chlorine Binding Sites List in 1c14
Chlorine binding site 2 out
of 6 in the Crystal Structure of E Coli Enoyl Reductase-Nad+-Triclosan Complex
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of Crystal Structure of E Coli Enoyl Reductase-Nad+-Triclosan Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl502
b:9.2
occ:1.00
|
CL15
|
A:TCL502
|
0.0
|
9.2
|
1.0
|
C11
|
A:TCL502
|
1.7
|
21.5
|
1.0
|
C10
|
A:TCL502
|
2.7
|
16.9
|
1.0
|
C12
|
A:TCL502
|
2.7
|
21.2
|
1.0
|
N
|
A:ALA95
|
3.2
|
15.7
|
1.0
|
O
|
A:ALA95
|
3.2
|
20.4
|
1.0
|
CB
|
A:ALA95
|
3.7
|
16.2
|
1.0
|
CA
|
A:ALA95
|
3.8
|
17.4
|
1.0
|
C
|
A:PHE94
|
3.9
|
17.5
|
1.0
|
O
|
A:HOH2085
|
3.9
|
30.4
|
1.0
|
C
|
A:ALA95
|
3.9
|
20.8
|
1.0
|
CA
|
A:PHE94
|
4.0
|
15.4
|
1.0
|
C9
|
A:TCL502
|
4.0
|
16.2
|
1.0
|
C13
|
A:TCL502
|
4.0
|
21.5
|
1.0
|
O
|
A:HOH2106
|
4.2
|
27.8
|
1.0
|
SD
|
A:MET159
|
4.5
|
19.8
|
1.0
|
C8
|
A:TCL502
|
4.5
|
22.9
|
1.0
|
CD1
|
A:PHE94
|
4.6
|
16.3
|
1.0
|
CG
|
A:MET159
|
4.6
|
15.9
|
1.0
|
CG
|
A:LEU100
|
4.7
|
33.4
|
1.0
|
CD1
|
A:LEU100
|
4.7
|
36.5
|
1.0
|
N
|
A:PHE94
|
4.8
|
15.1
|
1.0
|
O
|
A:PHE94
|
4.9
|
21.4
|
1.0
|
|
Chlorine binding site 3 out
of 6 in 1c14
Go back to
Chlorine Binding Sites List in 1c14
Chlorine binding site 3 out
of 6 in the Crystal Structure of E Coli Enoyl Reductase-Nad+-Triclosan Complex
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 3 of Crystal Structure of E Coli Enoyl Reductase-Nad+-Triclosan Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl502
b:2.0
occ:1.00
|
CL16
|
A:TCL502
|
0.0
|
2.0
|
1.0
|
C9
|
A:TCL502
|
1.7
|
16.2
|
1.0
|
C10
|
A:TCL502
|
2.7
|
16.9
|
1.0
|
C8
|
A:TCL502
|
2.7
|
22.9
|
1.0
|
O7
|
A:TCL502
|
3.0
|
25.0
|
1.0
|
CB
|
A:ALA196
|
3.2
|
33.9
|
1.0
|
O
|
A:GLY93
|
3.5
|
14.1
|
1.0
|
C2D
|
A:NAD501
|
3.6
|
16.1
|
1.0
|
C3D
|
A:NAD501
|
3.6
|
15.1
|
1.0
|
O5D
|
A:NAD501
|
3.7
|
14.0
|
1.0
|
O2D
|
A:NAD501
|
3.8
|
17.5
|
1.0
|
C
|
A:GLY93
|
3.8
|
13.1
|
1.0
|
CA
|
A:GLY93
|
3.9
|
12.5
|
1.0
|
C11
|
A:TCL502
|
4.0
|
21.5
|
1.0
|
C5B
|
A:NAD501
|
4.0
|
20.3
|
1.0
|
C13
|
A:TCL502
|
4.1
|
21.5
|
1.0
|
N
|
A:GLY93
|
4.1
|
15.8
|
1.0
|
O3
|
A:NAD501
|
4.2
|
18.3
|
1.0
|
C5
|
A:TCL502
|
4.3
|
24.7
|
1.0
|
O3D
|
A:NAD501
|
4.5
|
15.8
|
1.0
|
PN
|
A:NAD501
|
4.5
|
15.4
|
1.0
|
C5D
|
A:NAD501
|
4.6
|
12.9
|
1.0
|
C12
|
A:TCL502
|
4.6
|
21.2
|
1.0
|
O1N
|
A:NAD501
|
4.6
|
15.5
|
1.0
|
C4D
|
A:NAD501
|
4.6
|
13.5
|
1.0
|
CA
|
A:ALA196
|
4.6
|
36.3
|
1.0
|
N
|
A:PHE94
|
4.8
|
15.1
|
1.0
|
O5B
|
A:NAD501
|
4.9
|
23.1
|
1.0
|
O
|
A:HOH2161
|
5.0
|
43.6
|
1.0
|
C1D
|
A:NAD501
|
5.0
|
16.1
|
1.0
|
|
Chlorine binding site 4 out
of 6 in 1c14
Go back to
Chlorine Binding Sites List in 1c14
Chlorine binding site 4 out
of 6 in the Crystal Structure of E Coli Enoyl Reductase-Nad+-Triclosan Complex
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 4 of Crystal Structure of E Coli Enoyl Reductase-Nad+-Triclosan Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl1502
b:2.0
occ:1.00
|
CL14
|
B:TCL1502
|
0.0
|
2.0
|
1.0
|
C2
|
B:TCL1502
|
1.7
|
11.1
|
1.0
|
C1
|
B:TCL1502
|
2.7
|
13.6
|
1.0
|
C3
|
B:TCL1502
|
2.7
|
20.3
|
1.0
|
CE
|
B:MET1206
|
3.5
|
53.8
|
1.0
|
CZ
|
B:TYR1146
|
3.6
|
12.7
|
1.0
|
CE1
|
B:PHE1203
|
3.6
|
31.2
|
1.0
|
CE1
|
B:TYR1146
|
3.6
|
9.5
|
1.0
|
CB
|
B:PRO1191
|
3.7
|
16.6
|
1.0
|
CA
|
B:PRO1191
|
3.9
|
14.8
|
1.0
|
CE2
|
B:TYR1146
|
3.9
|
3.9
|
1.0
|
CD1
|
B:TYR1146
|
3.9
|
6.1
|
1.0
|
O7N
|
B:NAD1501
|
3.9
|
15.6
|
1.0
|
OH
|
B:TYR1146
|
4.0
|
15.2
|
1.0
|
C6
|
B:TCL1502
|
4.0
|
19.6
|
1.0
|
C4
|
B:TCL1502
|
4.0
|
22.3
|
1.0
|
CD2
|
B:TYR1146
|
4.2
|
7.5
|
1.0
|
CG
|
B:TYR1146
|
4.3
|
9.4
|
1.0
|
CD1
|
B:ILE1200
|
4.3
|
39.9
|
1.0
|
C4N
|
B:NAD1501
|
4.4
|
3.7
|
1.0
|
CZ
|
B:PHE1203
|
4.4
|
29.4
|
1.0
|
CD1
|
B:PHE1203
|
4.4
|
33.3
|
1.0
|
N
|
B:PRO1191
|
4.5
|
15.0
|
1.0
|
C7N
|
B:NAD1501
|
4.5
|
15.3
|
1.0
|
C5
|
B:TCL1502
|
4.5
|
22.3
|
1.0
|
CD
|
B:PRO1191
|
4.6
|
17.9
|
1.0
|
SD
|
B:MET1206
|
4.6
|
55.7
|
1.0
|
C3N
|
B:NAD1501
|
4.7
|
13.1
|
1.0
|
CG
|
B:PRO1191
|
4.8
|
15.8
|
1.0
|
|
Chlorine binding site 5 out
of 6 in 1c14
Go back to
Chlorine Binding Sites List in 1c14
Chlorine binding site 5 out
of 6 in the Crystal Structure of E Coli Enoyl Reductase-Nad+-Triclosan Complex
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 5 of Crystal Structure of E Coli Enoyl Reductase-Nad+-Triclosan Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl1502
b:6.7
occ:1.00
|
CL15
|
B:TCL1502
|
0.0
|
6.7
|
1.0
|
C11
|
B:TCL1502
|
1.7
|
21.2
|
1.0
|
C10
|
B:TCL1502
|
2.7
|
24.2
|
1.0
|
C12
|
B:TCL1502
|
2.7
|
21.4
|
1.0
|
N
|
B:ALA1095
|
3.3
|
16.5
|
1.0
|
O
|
B:ALA1095
|
3.5
|
20.1
|
1.0
|
CB
|
B:ALA1095
|
3.7
|
19.4
|
1.0
|
CA
|
B:ALA1095
|
4.0
|
17.7
|
1.0
|
C9
|
B:TCL1502
|
4.0
|
27.9
|
1.0
|
C13
|
B:TCL1502
|
4.0
|
27.0
|
1.0
|
C
|
B:PHE1094
|
4.1
|
15.3
|
1.0
|
C
|
B:ALA1095
|
4.1
|
20.9
|
1.0
|
CA
|
B:PHE1094
|
4.2
|
14.6
|
1.0
|
CG
|
B:LEU1100
|
4.3
|
22.9
|
1.0
|
CG
|
B:MET1159
|
4.4
|
17.9
|
1.0
|
C8
|
B:TCL1502
|
4.5
|
29.1
|
1.0
|
SD
|
B:MET1159
|
4.6
|
24.9
|
1.0
|
CD2
|
B:LEU1100
|
4.7
|
25.6
|
1.0
|
N
|
B:PHE1094
|
4.9
|
15.9
|
1.0
|
CD1
|
B:LEU1100
|
4.9
|
28.7
|
1.0
|
CD1
|
B:PHE1094
|
5.0
|
18.6
|
1.0
|
|
Chlorine binding site 6 out
of 6 in 1c14
Go back to
Chlorine Binding Sites List in 1c14
Chlorine binding site 6 out
of 6 in the Crystal Structure of E Coli Enoyl Reductase-Nad+-Triclosan Complex
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 6 of Crystal Structure of E Coli Enoyl Reductase-Nad+-Triclosan Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl1502
b:13.7
occ:1.00
|
CL16
|
B:TCL1502
|
0.0
|
13.7
|
1.0
|
C9
|
B:TCL1502
|
1.7
|
27.9
|
1.0
|
C10
|
B:TCL1502
|
2.7
|
24.2
|
1.0
|
C8
|
B:TCL1502
|
2.8
|
29.1
|
1.0
|
O7
|
B:TCL1502
|
3.1
|
29.7
|
1.0
|
O
|
B:GLY1093
|
3.4
|
16.9
|
1.0
|
C3D
|
B:NAD1501
|
3.4
|
7.8
|
1.0
|
C2D
|
B:NAD1501
|
3.4
|
12.4
|
1.0
|
CB
|
B:ALA1196
|
3.4
|
39.5
|
1.0
|
O2D
|
B:NAD1501
|
3.5
|
11.8
|
1.0
|
CA
|
B:GLY1093
|
3.6
|
12.5
|
1.0
|
O5D
|
B:NAD1501
|
3.6
|
20.4
|
1.0
|
C
|
B:GLY1093
|
3.7
|
15.4
|
1.0
|
N
|
B:GLY1093
|
3.9
|
9.8
|
1.0
|
C11
|
B:TCL1502
|
4.0
|
21.2
|
1.0
|
C5B
|
B:NAD1501
|
4.1
|
11.9
|
1.0
|
C13
|
B:TCL1502
|
4.1
|
27.0
|
1.0
|
O3D
|
B:NAD1501
|
4.2
|
16.6
|
1.0
|
O
|
B:HOH2091
|
4.3
|
26.0
|
1.0
|
C5
|
B:TCL1502
|
4.4
|
22.3
|
1.0
|
O3
|
B:NAD1501
|
4.4
|
19.8
|
1.0
|
C5D
|
B:NAD1501
|
4.5
|
14.2
|
1.0
|
C4D
|
B:NAD1501
|
4.5
|
9.8
|
1.0
|
C12
|
B:TCL1502
|
4.6
|
21.4
|
1.0
|
PN
|
B:NAD1501
|
4.6
|
15.9
|
1.0
|
N
|
B:PHE1094
|
4.6
|
15.9
|
1.0
|
O1N
|
B:NAD1501
|
4.7
|
12.0
|
1.0
|
O17
|
B:TCL1502
|
4.9
|
23.5
|
1.0
|
C
|
B:ILE1092
|
4.9
|
13.6
|
1.0
|
C1D
|
B:NAD1501
|
4.9
|
13.3
|
1.0
|
CA
|
B:ALA1196
|
4.9
|
38.2
|
1.0
|
|
Reference:
X.Qiu,
C.A.Janson,
R.I.Court,
M.G.Smyth,
D.J.Payne,
S.S.Abdel-Meguid.
Molecular Basis For Triclosan Activity Involves A Flipping Loop in the Active Site. Protein Sci. V. 8 2529 1999.
ISSN: ISSN 0961-8368
PubMed: 10595560
Page generated: Fri Jul 19 21:07:31 2024
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