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Chlorine in PDB 1c6k: T4 Lysozyme Mutant C54T/C97A/L99A in the Presence of 8 Atm Xenon

Enzymatic activity of T4 Lysozyme Mutant C54T/C97A/L99A in the Presence of 8 Atm Xenon

All present enzymatic activity of T4 Lysozyme Mutant C54T/C97A/L99A in the Presence of 8 Atm Xenon:
3.2.1.17;

Protein crystallography data

The structure of T4 Lysozyme Mutant C54T/C97A/L99A in the Presence of 8 Atm Xenon, PDB code: 1c6k was solved by M.L.Quillin, B.W.Matthews, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 60.00 / 1.90
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 61.068, 61.068, 97.072, 90.00, 90.00, 120.00
R / Rfree (%) n/a / n/a

Other elements in 1c6k:

The structure of T4 Lysozyme Mutant C54T/C97A/L99A in the Presence of 8 Atm Xenon also contains other interesting chemical elements:

Xenon (Xe) 3 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the T4 Lysozyme Mutant C54T/C97A/L99A in the Presence of 8 Atm Xenon (pdb code 1c6k). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the T4 Lysozyme Mutant C54T/C97A/L99A in the Presence of 8 Atm Xenon, PDB code: 1c6k:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 1c6k

Go back to Chlorine Binding Sites List in 1c6k
Chlorine binding site 1 out of 2 in the T4 Lysozyme Mutant C54T/C97A/L99A in the Presence of 8 Atm Xenon


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of T4 Lysozyme Mutant C54T/C97A/L99A in the Presence of 8 Atm Xenon within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl173

b:51.3
occ:1.00
O A:HOH209 2.9 33.6 1.0
N A:ARG145 2.9 9.6 1.0
N A:ASN144 3.4 10.6 1.0
CB A:ARG145 3.4 12.4 1.0
C A:THR142 3.5 11.2 1.0
CB A:THR142 3.5 12.8 1.0
CA A:THR142 3.5 5.8 1.0
O A:THR142 3.6 10.9 1.0
CB A:ASN144 3.7 13.8 1.0
CA A:ARG145 3.8 13.5 1.0
CA A:ASN144 3.8 12.9 1.0
C A:ASN144 3.8 17.3 1.0
N A:PRO143 4.0 11.1 1.0
O A:HOH245 4.2 40.1 1.0
C A:PRO143 4.3 18.4 1.0
CG2 A:THR142 4.4 13.8 1.0
O A:HOH230 4.4 30.2 1.0
CD A:PRO143 4.6 12.1 1.0
OG1 A:THR142 4.6 16.1 1.0
CG A:ASN144 4.7 27.4 1.0
CA A:PRO143 4.8 12.5 1.0
CG A:ARG145 4.9 17.2 1.0
O A:HOH237 4.9 35.8 1.0
C A:ARG145 4.9 13.2 1.0
N A:ALA146 4.9 13.9 1.0
O A:ASN144 4.9 14.4 1.0
N A:THR142 5.0 14.5 1.0

Chlorine binding site 2 out of 2 in 1c6k

Go back to Chlorine Binding Sites List in 1c6k
Chlorine binding site 2 out of 2 in the T4 Lysozyme Mutant C54T/C97A/L99A in the Presence of 8 Atm Xenon


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of T4 Lysozyme Mutant C54T/C97A/L99A in the Presence of 8 Atm Xenon within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl178

b:37.2
occ:0.50
O A:HOH215 2.9 17.8 1.0
O A:HOH182 3.4 20.1 1.0
O A:HOH200 3.8 34.3 1.0
O A:HOH246 4.0 39.6 1.0
CB A:ALA49 4.0 15.2 1.0
CE1 A:HIS31 4.1 15.8 1.0
NE2 A:GLN69 4.3 19.4 1.0
NE2 A:HIS31 4.4 15.5 1.0
O A:HOH282 4.4 28.0 1.0
CA A:ALA49 4.4 18.8 1.0
CD2 A:LEU66 4.7 18.9 1.0

Reference:

M.L.Quillin, W.A.Breyer, I.J.Griswold, B.W.Matthews. Size Versus Polarizability in Protein-Ligand Interactions: Binding of Noble Gases Within Engineered Cavities in Phage T4 Lysozyme. J.Mol.Biol. V. 302 955 2000.
ISSN: ISSN 0022-2836
PubMed: 10993735
DOI: 10.1006/JMBI.2000.4063
Page generated: Fri Jul 19 21:17:38 2024

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