Atomistry » Chlorine » PDB 1cu6-1dhi » 1cxp
Atomistry »
  Chlorine »
    PDB 1cu6-1dhi »
      1cxp »

Chlorine in PDB 1cxp: Cryogenic Crystal Structure of Human Myeloperoxidase Isoform C

Enzymatic activity of Cryogenic Crystal Structure of Human Myeloperoxidase Isoform C

All present enzymatic activity of Cryogenic Crystal Structure of Human Myeloperoxidase Isoform C:
1.11.1.7;

Protein crystallography data

The structure of Cryogenic Crystal Structure of Human Myeloperoxidase Isoform C, PDB code: 1cxp was solved by T.J.Fiedler, R.E.Fenna, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.00 / 1.80
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 111.030, 63.380, 92.170, 90.00, 97.36, 90.00
R / Rfree (%) 19.7 / 23.9

Other elements in 1cxp:

The structure of Cryogenic Crystal Structure of Human Myeloperoxidase Isoform C also contains other interesting chemical elements:

Iron (Fe) 2 atoms
Calcium (Ca) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Cryogenic Crystal Structure of Human Myeloperoxidase Isoform C (pdb code 1cxp). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Cryogenic Crystal Structure of Human Myeloperoxidase Isoform C, PDB code: 1cxp:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 1cxp

Go back to Chlorine Binding Sites List in 1cxp
Chlorine binding site 1 out of 2 in the Cryogenic Crystal Structure of Human Myeloperoxidase Isoform C


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Cryogenic Crystal Structure of Human Myeloperoxidase Isoform C within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1601

b:6.8
occ:1.00
O A:HOH652A 3.1 7.4 1.0
N A:TRP32 3.2 5.9 1.0
N C:VAL327 3.2 3.6 1.0
CB C:ASN326 3.5 4.8 1.0
CH2 C:TRP436 3.6 6.5 1.0
N C:ASN326 3.7 3.4 1.0
CA A:ARG31 3.7 7.5 1.0
CB C:VAL327 3.8 4.9 1.0
CG1 C:VAL327 3.9 3.5 1.0
CA C:ASN326 3.9 5.1 1.0
CZ2 C:TRP436 4.0 4.8 1.0
C A:ARG31 4.0 6.7 1.0
O A:VAL30 4.1 5.2 1.0
C C:ASN326 4.1 2.0 1.0
CA C:VAL327 4.1 4.2 1.0
N A:LEU33 4.1 6.3 1.0
CD2 C:LEU430 4.2 6.7 1.0
CD A:ARG31 4.2 7.8 1.0
CA A:TRP32 4.2 5.3 1.0
CB A:TRP32 4.2 7.8 1.0
O A:LEU33 4.4 5.6 1.0
C C:ALA325 4.4 4.7 1.0
CB A:ARG31 4.5 8.1 1.0
CB C:ALA325 4.5 4.0 1.0
C A:TRP32 4.7 6.5 1.0
CZ3 C:TRP436 4.8 4.8 1.0
NH1 A:ARG31 4.8 5.7 1.0
N A:ARG31 4.8 6.3 1.0
CG A:ARG31 4.8 9.8 1.0
CG C:ASN326 4.8 3.9 1.0
C A:VAL30 4.8 5.2 1.0
CG A:TRP32 4.9 8.7 1.0
CA C:ALA325 4.9 6.2 1.0

Chlorine binding site 2 out of 2 in 1cxp

Go back to Chlorine Binding Sites List in 1cxp
Chlorine binding site 2 out of 2 in the Cryogenic Crystal Structure of Human Myeloperoxidase Isoform C


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Cryogenic Crystal Structure of Human Myeloperoxidase Isoform C within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl1002

b:7.5
occ:1.00
O B:HOH652B 3.2 5.5 1.0
N B:TRP32 3.2 7.5 1.0
N D:VAL327 3.3 4.0 1.0
CH2 D:TRP436 3.6 4.8 1.0
CB D:ASN326 3.7 6.8 1.0
N D:ASN326 3.7 4.8 1.0
CA B:ARG31 3.7 7.8 1.0
CB D:VAL327 3.8 5.2 1.0
CG1 D:VAL327 3.9 6.6 1.0
CZ2 D:TRP436 3.9 4.4 1.0
C B:ARG31 4.0 7.4 1.0
CA D:ASN326 4.0 5.0 1.0
C D:ASN326 4.0 4.2 1.0
O B:VAL30 4.1 9.4 1.0
CA D:VAL327 4.1 4.8 1.0
N B:LEU33 4.1 7.3 1.0
CA B:TRP32 4.2 7.1 1.0
CB B:TRP32 4.2 7.3 1.0
CD2 D:LEU430 4.3 6.2 1.0
CD B:ARG31 4.4 8.8 1.0
CB D:ALA325 4.4 7.8 1.0
O B:LEU33 4.4 7.8 1.0
CB B:ARG31 4.4 8.2 1.0
C D:ALA325 4.5 6.9 1.0
C B:TRP32 4.7 7.7 1.0
NH1 B:ARG31 4.8 6.7 1.0
N B:ARG31 4.8 8.3 1.0
CG B:ARG31 4.8 9.1 1.0
CG B:TRP32 4.8 11.0 1.0
CZ3 D:TRP436 4.8 5.8 1.0
C B:VAL30 4.9 6.8 1.0
CA D:ALA325 4.9 7.3 1.0
CG D:ASN326 4.9 4.8 1.0

Reference:

T.J.Fiedler, C.A.Davey, R.E.Fenna. X-Ray Crystal Structure and Characterization of Halide-Binding Sites of Human Myeloperoxidase at 1.8 A Resolution. J.Biol.Chem. V. 275 11964 2000.
ISSN: ISSN 0021-9258
PubMed: 10766826
DOI: 10.1074/JBC.275.16.11964
Page generated: Fri Jul 19 21:30:21 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy