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Chlorine in PDB 1diq: Crystal Structure of P-Cresol Methylhydroxylase with Substrate Bound

Enzymatic activity of Crystal Structure of P-Cresol Methylhydroxylase with Substrate Bound

All present enzymatic activity of Crystal Structure of P-Cresol Methylhydroxylase with Substrate Bound:
1.17.99.1;

Protein crystallography data

The structure of Crystal Structure of P-Cresol Methylhydroxylase with Substrate Bound, PDB code: 1diq was solved by L.M.Cunane, Z.W.Chen, N.Shamala, F.S.Mathews, C.S.Cronin, W.S.Mcintire, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 25.00 / 2.75
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 139.100, 130.500, 74.400, 90.00, 90.00, 90.00
R / Rfree (%) 13.3 / 18.3

Other elements in 1diq:

The structure of Crystal Structure of P-Cresol Methylhydroxylase with Substrate Bound also contains other interesting chemical elements:

Iron (Fe) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of P-Cresol Methylhydroxylase with Substrate Bound (pdb code 1diq). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of P-Cresol Methylhydroxylase with Substrate Bound, PDB code: 1diq:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 1diq

Go back to Chlorine Binding Sites List in 1diq
Chlorine binding site 1 out of 2 in the Crystal Structure of P-Cresol Methylhydroxylase with Substrate Bound


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of P-Cresol Methylhydroxylase with Substrate Bound within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl702

b:39.2
occ:1.00
N A:GLY94 3.2 24.5 1.0
N A:GLY96 3.3 26.1 1.0
N A:MET48 3.4 28.8 1.0
OG A:SER97 3.4 29.5 1.0
N A:SER97 3.5 28.6 1.0
CA A:GLY96 3.8 27.6 1.0
C A:GLY96 3.8 29.3 1.0
CA A:GLY94 3.8 21.4 1.0
N A:TYR95 3.8 25.3 1.0
CB A:MET48 3.9 24.1 1.0
CB A:SER97 4.0 31.2 1.0
C A:GLY94 4.1 26.0 1.0
CA A:MET48 4.1 29.4 1.0
CG A:MET49 4.1 31.2 1.0
CG A:MET48 4.2 26.6 1.0
O A:ASN92 4.2 26.5 1.0
CA A:ILE47 4.2 31.4 1.0
C A:PHE93 4.2 27.0 1.0
C A:ILE47 4.3 29.6 1.0
CA A:PHE93 4.3 25.0 1.0
CA A:SER97 4.3 29.5 1.0
N A:MET49 4.4 28.1 1.0
C A:MET48 4.4 27.7 1.0
O A:GLY96 4.5 28.1 1.0
C A:TYR95 4.5 28.0 1.0
CB A:ILE47 4.5 31.3 1.0
CA A:TYR95 4.7 24.2 1.0
CG2 A:ILE47 4.8 29.5 1.0
O A:HOH848 4.8 44.0 1.0
O A:SER392 4.8 30.7 1.0
SD A:MET49 4.9 34.0 1.0
SD A:MET48 5.0 40.0 1.0

Chlorine binding site 2 out of 2 in 1diq

Go back to Chlorine Binding Sites List in 1diq
Chlorine binding site 2 out of 2 in the Crystal Structure of P-Cresol Methylhydroxylase with Substrate Bound


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of P-Cresol Methylhydroxylase with Substrate Bound within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl701

b:36.8
occ:1.00
N B:GLY94 3.3 24.4 1.0
N B:MET48 3.3 32.3 1.0
N B:GLY96 3.3 27.5 1.0
OG B:SER97 3.3 23.4 1.0
N B:SER97 3.5 31.5 1.0
CA B:GLY96 3.7 29.4 1.0
C B:GLY96 3.7 31.7 1.0
CA B:GLY94 3.9 23.6 1.0
N B:TYR95 3.9 25.2 1.0
CB B:MET48 4.0 31.1 1.0
CB B:SER97 4.0 31.4 1.0
CG B:MET49 4.1 29.9 1.0
CA B:MET48 4.1 33.6 1.0
C B:GLY94 4.1 28.1 1.0
CA B:ILE47 4.2 30.4 1.0
CG B:MET48 4.2 28.7 1.0
C B:ILE47 4.2 32.9 1.0
O B:ASN92 4.3 25.6 1.0
C B:PHE93 4.3 24.8 1.0
CA B:SER97 4.3 31.3 1.0
N B:MET49 4.3 32.1 1.0
CA B:PHE93 4.4 22.0 1.0
O B:GLY96 4.4 33.9 1.0
C B:MET48 4.4 32.2 1.0
CB B:ILE47 4.5 25.7 1.0
C B:TYR95 4.5 31.2 1.0
CG2 B:ILE47 4.7 20.5 1.0
CA B:TYR95 4.7 26.9 1.0
SD B:MET49 4.8 35.8 1.0
O B:SER392 4.9 30.0 1.0
CE B:MET49 5.0 26.1 1.0

Reference:

L.M.Cunane, Z.W.Chen, N.Shamala, F.S.Mathews, C.N.Cronin, W.S.Mcintire. Structures of the Flavocytochrome P-Cresol Methylhydroxylase and Its Enzyme-Substrate Complex: Gated Substrate Entry and Proton Relays Support the Proposed Catalytic Mechanism. J.Mol.Biol. V. 295 357 2000.
ISSN: ISSN 0022-2836
PubMed: 10623531
DOI: 10.1006/JMBI.1999.3290
Page generated: Sat Dec 12 08:33:54 2020

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