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Chlorine in PDB 1dv8: Crystal Structure of the Carbohydrate Recognition Domain of the H1 Subunit of the Asialoglycoprotein Receptor

Protein crystallography data

The structure of Crystal Structure of the Carbohydrate Recognition Domain of the H1 Subunit of the Asialoglycoprotein Receptor, PDB code: 1dv8 was solved by M.Meier, M.D.Bider, V.N.Malashkevich, M.Spiess, P.Burkhard, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.35 / 2.30
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 113.720, 32.460, 40.820, 90.00, 91.29, 90.00
R / Rfree (%) 19.5 / 24.7

Other elements in 1dv8:

The structure of Crystal Structure of the Carbohydrate Recognition Domain of the H1 Subunit of the Asialoglycoprotein Receptor also contains other interesting chemical elements:

Calcium (Ca) 3 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of the Carbohydrate Recognition Domain of the H1 Subunit of the Asialoglycoprotein Receptor (pdb code 1dv8). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of the Carbohydrate Recognition Domain of the H1 Subunit of the Asialoglycoprotein Receptor, PDB code: 1dv8:

Chlorine binding site 1 out of 1 in 1dv8

Go back to Chlorine Binding Sites List in 1dv8
Chlorine binding site 1 out of 1 in the Crystal Structure of the Carbohydrate Recognition Domain of the H1 Subunit of the Asialoglycoprotein Receptor


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of the Carbohydrate Recognition Domain of the H1 Subunit of the Asialoglycoprotein Receptor within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1004

b:21.2
occ:0.50
NH1 A:ARG270 3.3 16.0 1.0
CG A:ARG270 3.8 20.5 1.0
CD A:PRO271 3.9 17.7 1.0
CD A:ARG270 4.0 20.6 1.0
CB A:ARG270 4.0 19.6 1.0
O A:HOH73 4.1 45.9 1.0
CA A:ARG270 4.4 18.2 1.0
CZ A:ARG270 4.4 19.7 1.0
CG A:PRO271 4.6 18.7 1.0
NE A:ARG270 4.7 22.8 1.0
N A:PRO271 4.7 18.3 1.0

Reference:

M.Meier, M.D.Bider, V.N.Malashkevich, M.Spiess, P.Burkhard. Crystal Structure of the Carbohydrate Recognition Domain of the H1 Subunit of the Asialoglycoprotein Receptor. J.Mol.Biol. V. 300 857 2000.
ISSN: ISSN 0022-2836
PubMed: 10891274
DOI: 10.1006/JMBI.2000.3853
Page generated: Fri Jul 19 21:39:43 2024

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