Atomistry » Chlorine » PDB 1e3a-1exv » 1ebh
Atomistry »
  Chlorine »
    PDB 1e3a-1exv »
      1ebh »

Chlorine in PDB 1ebh: Octahedral Coordination at the High Affinity Metal Site in Enolase; Crystallographic Analysis of the Mg++-Enzyme From Yeast at 1.9 Angstroms Resolution

Enzymatic activity of Octahedral Coordination at the High Affinity Metal Site in Enolase; Crystallographic Analysis of the Mg++-Enzyme From Yeast at 1.9 Angstroms Resolution

All present enzymatic activity of Octahedral Coordination at the High Affinity Metal Site in Enolase; Crystallographic Analysis of the Mg++-Enzyme From Yeast at 1.9 Angstroms Resolution:
4.2.1.11;

Protein crystallography data

The structure of Octahedral Coordination at the High Affinity Metal Site in Enolase; Crystallographic Analysis of the Mg++-Enzyme From Yeast at 1.9 Angstroms Resolution, PDB code: 1ebh was solved by J.E.Wedekind, G.H.Reed, I.Rayment, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 1.90
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 72.500, 73.200, 89.100, 90.00, 104.40, 90.00
R / Rfree (%) n/a / n/a

Other elements in 1ebh:

The structure of Octahedral Coordination at the High Affinity Metal Site in Enolase; Crystallographic Analysis of the Mg++-Enzyme From Yeast at 1.9 Angstroms Resolution also contains other interesting chemical elements:

Magnesium (Mg) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Octahedral Coordination at the High Affinity Metal Site in Enolase; Crystallographic Analysis of the Mg++-Enzyme From Yeast at 1.9 Angstroms Resolution (pdb code 1ebh). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Octahedral Coordination at the High Affinity Metal Site in Enolase; Crystallographic Analysis of the Mg++-Enzyme From Yeast at 1.9 Angstroms Resolution, PDB code: 1ebh:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 1ebh

Go back to Chlorine Binding Sites List in 1ebh
Chlorine binding site 1 out of 2 in the Octahedral Coordination at the High Affinity Metal Site in Enolase; Crystallographic Analysis of the Mg++-Enzyme From Yeast at 1.9 Angstroms Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Octahedral Coordination at the High Affinity Metal Site in Enolase; Crystallographic Analysis of the Mg++-Enzyme From Yeast at 1.9 Angstroms Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl437

b:31.8
occ:1.00
 NE A:ARG374 3.1 10.7 1.0
O A:HOH443 3.1 29.6 1.0
N A:SER375 3.3 13.8 1.0
O A:HOH479 3.3 28.5 1.0
NH2 A:ARG374 3.6 11.6 1.0
CA A:ARG374 3.7 13.2 1.0
CA A:GLY37 3.7 17.8 0.4
CZ A:ARG374 3.8 11.2 1.0
OG A:SER375 3.9 29.0 1.0
C A:ARG374 3.9 13.7 1.0
O A:HOH586 4.0 29.8 1.0
CB A:ARG374 4.1 13.2 1.0
NZ A:LYS345 4.1 10.9 1.0
O A:HOH535 4.1 84.2 1.0
CD A:ARG374 4.2 10.9 1.0
CB A:SER375 4.3 15.4 1.0
CA A:SER375 4.3 13.8 1.0
CE A:LYS345 4.3 12.9 1.0
O A:HOH691 4.6 79.2 1.0
N A:ALA38 4.6 25.7 0.4
C A:GLY37 4.7 22.8 0.4
CG A:ARG374 4.8 22.8 1.0
N A:GLY37 4.8 14.7 0.4
O A:HIS373 4.9 13.2 1.0
O A:HOH487 4.9 21.7 1.0
N A:ARG374 5.0 12.8 1.0

Chlorine binding site 2 out of 2 in 1ebh

Go back to Chlorine Binding Sites List in 1ebh
Chlorine binding site 2 out of 2 in the Octahedral Coordination at the High Affinity Metal Site in Enolase; Crystallographic Analysis of the Mg++-Enzyme From Yeast at 1.9 Angstroms Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Octahedral Coordination at the High Affinity Metal Site in Enolase; Crystallographic Analysis of the Mg++-Enzyme From Yeast at 1.9 Angstroms Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl437

b:36.8
occ:1.00
 NE B:ARG374 3.0 11.4 1.0
N B:SER375 3.1 14.1 1.0
CA B:GLY37 3.4 14.1 0.4
O B:HOH466 3.5 24.5 1.0
CA B:ARG374 3.6 11.1 1.0
NH2 B:ARG374 3.6 12.0 1.0
O B:HOH640 3.7 33.1 1.0
OG B:SER375 3.8 34.9 1.0
C B:ARG374 3.8 13.4 1.0
CZ B:ARG374 3.8 12.1 1.0
CB B:ARG374 3.9 11.2 1.0
CD B:ARG374 4.0 10.2 1.0
O B:HOH459 4.1 38.0 1.0
CB B:SER375 4.2 15.4 1.0
CA B:SER375 4.2 15.2 1.0
NZ B:LYS345 4.3 11.9 1.0
N B:ALA38 4.4 21.6 0.4
C B:GLY37 4.4 18.8 0.4
N B:GLY37 4.4 12.8 0.4
CE B:LYS345 4.5 12.7 1.0
CG B:ARG374 4.6 17.3 1.0
O B:HIS373 4.8 9.8 1.0
N B:ARG374 4.8 9.0 1.0
O B:SER36 5.0 11.0 0.5
O B:SER36 5.0 29.3 0.5
O B:ARG374 5.0 13.3 1.0

Reference:

J.E.Wedekind, G.H.Reed, I.Rayment. Octahedral Coordination at the High-Affinity Metal Site in Enolase: Crystallographic Analysis of the Mgii--Enzyme Complex From Yeast at 1.9 A Resolution. Biochemistry V. 34 4325 1995.
ISSN: ISSN 0006-2960
PubMed: 7703246
DOI: 10.1021/BI00013A022
Page generated: Fri Jul 19 21:47:23 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy