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Chlorine in PDB 1el7: Complex of Monomeric Sarcosine Oxidase with the Inhibitor [Methytelluro]Acetate

Enzymatic activity of Complex of Monomeric Sarcosine Oxidase with the Inhibitor [Methytelluro]Acetate

All present enzymatic activity of Complex of Monomeric Sarcosine Oxidase with the Inhibitor [Methytelluro]Acetate:
1.5.3.1;

Protein crystallography data

The structure of Complex of Monomeric Sarcosine Oxidase with the Inhibitor [Methytelluro]Acetate, PDB code: 1el7 was solved by M.A.Wagner, P.Trickey, Z.-W.Chen, F.S.Mathews, M.S.Jorns, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 500.00 / 1.90
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 72.722, 69.504, 73.465, 90.00, 94.12, 90.00
R / Rfree (%) 17.5 / 21.3

Other elements in 1el7:

The structure of Complex of Monomeric Sarcosine Oxidase with the Inhibitor [Methytelluro]Acetate also contains other interesting chemical elements:

Tellurium (Te) 6 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Complex of Monomeric Sarcosine Oxidase with the Inhibitor [Methytelluro]Acetate (pdb code 1el7). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Complex of Monomeric Sarcosine Oxidase with the Inhibitor [Methytelluro]Acetate, PDB code: 1el7:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 1el7

Go back to Chlorine Binding Sites List in 1el7
Chlorine binding site 1 out of 2 in the Complex of Monomeric Sarcosine Oxidase with the Inhibitor [Methytelluro]Acetate


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Complex of Monomeric Sarcosine Oxidase with the Inhibitor [Methytelluro]Acetate within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl804

b:14.4
occ:1.00
O3' A:FAD400 3.0 9.2 1.0
N A:GLY344 3.0 9.3 1.0
O A:HOH816 3.2 10.8 1.0
N A:THR318 3.4 11.1 1.0
C3' A:FAD400 3.4 9.4 1.0
CA A:TYR317 3.6 13.9 1.0
N A:SER343 3.6 10.6 1.0
CA A:GLY344 3.7 10.3 1.0
C A:PHE342 3.7 11.0 1.0
CB A:PHE342 3.9 16.2 1.0
C A:TYR317 3.9 15.4 1.0
O A:HOH855 4.0 16.2 1.0
C A:SER343 4.0 11.0 1.0
CA A:PHE342 4.1 13.2 1.0
O A:MET316 4.1 13.7 1.0
O A:PHE342 4.1 11.7 1.0
CA A:SER343 4.2 8.5 1.0
C5' A:FAD400 4.2 11.5 1.0
CB A:TYR317 4.3 12.5 1.0
C1' A:FAD400 4.3 10.6 1.0
N A:PHE342 4.3 12.8 1.0
O A:THR318 4.4 13.6 1.0
CA A:THR318 4.4 13.1 1.0
C4' A:FAD400 4.6 8.3 1.0
C2' A:FAD400 4.6 10.9 1.0
CB A:THR318 4.6 13.6 1.0
OG A:SER43 4.6 15.7 1.0
C A:GLY344 4.6 11.8 1.0
N A:TYR317 4.7 11.8 1.0
C A:THR318 4.7 16.6 1.0
OG1 A:THR318 4.8 16.5 1.0
CD1 A:TYR317 4.8 12.3 1.0
N A:HIS345 4.8 13.4 1.0
CB A:SER43 4.8 15.7 1.0
CG A:TYR317 4.8 12.1 1.0
C A:MET316 4.9 13.7 1.0

Chlorine binding site 2 out of 2 in 1el7

Go back to Chlorine Binding Sites List in 1el7
Chlorine binding site 2 out of 2 in the Complex of Monomeric Sarcosine Oxidase with the Inhibitor [Methytelluro]Acetate


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Complex of Monomeric Sarcosine Oxidase with the Inhibitor [Methytelluro]Acetate within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl814

b:14.2
occ:1.00
O B:HOH826 3.0 14.9 1.0
O3' B:FAD400 3.0 14.8 1.0
N B:GLY344 3.1 10.8 1.0
N B:THR318 3.2 13.4 1.0
C3' B:FAD400 3.5 12.2 1.0
CA B:TYR317 3.5 14.3 1.0
N B:SER343 3.7 12.9 1.0
C B:TYR317 3.8 15.0 1.0
C B:PHE342 3.8 11.2 1.0
CA B:GLY344 3.8 12.9 1.0
O B:HOH824 3.9 9.7 1.0
CB B:PHE342 4.0 12.4 1.0
O B:MET316 4.1 11.7 1.0
C B:SER343 4.1 13.0 1.0
CA B:SER343 4.2 10.9 1.0
C5' B:FAD400 4.2 10.2 1.0
CA B:PHE342 4.2 12.7 1.0
CB B:TYR317 4.2 12.1 1.0
O B:PHE342 4.3 10.5 1.0
CA B:THR318 4.3 13.7 1.0
O B:THR318 4.3 12.5 1.0
N B:PHE342 4.4 14.8 1.0
C1' B:FAD400 4.4 12.2 1.0
CB B:THR318 4.5 11.5 1.0
OG B:SER43 4.5 14.5 1.0
C4' B:FAD400 4.6 11.6 1.0
N B:TYR317 4.6 11.4 1.0
OG1 B:THR318 4.6 17.1 1.0
C B:THR318 4.7 12.8 1.0
C2' B:FAD400 4.7 14.0 1.0
C B:MET316 4.8 12.8 1.0
C B:GLY344 4.8 11.8 1.0
CB B:SER43 4.8 14.7 1.0
CD1 B:TYR317 4.8 11.9 1.0
CG B:TYR317 4.8 13.2 1.0
N B:HIS345 5.0 14.8 1.0
O B:TYR317 5.0 14.1 1.0

Reference:

M.A.Wagner, P.Trickey, Z.W.Chen, F.S.Mathews, M.S.Jorns. Monomeric Sarcosine Oxidase: 1. Flavin Reactivity and Active Site Binding Determinants. Biochemistry V. 39 8813 2000.
ISSN: ISSN 0006-2960
PubMed: 10913292
DOI: 10.1021/BI000349Z
Page generated: Sat Dec 12 08:34:43 2020

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