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Chlorine in PDB 1fm0: Molybdopterin Synthase (Moad/Moae)

Protein crystallography data

The structure of Molybdopterin Synthase (Moad/Moae), PDB code: 1fm0 was solved by M.J.Rudolph, M.M.Wuebbens, K.V.Rajagolpalan, H.Schindelin, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 10.00 / 1.45
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 66.029, 48.955, 76.457, 90.00, 107.72, 90.00
R / Rfree (%) 15.2 / 18.2

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Molybdopterin Synthase (Moad/Moae) (pdb code 1fm0). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Molybdopterin Synthase (Moad/Moae), PDB code: 1fm0:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in 1fm0

Go back to Chlorine Binding Sites List in 1fm0
Chlorine binding site 1 out of 3 in the Molybdopterin Synthase (Moad/Moae)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Molybdopterin Synthase (Moad/Moae) within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cl303

b:26.6
occ:1.00
NE2 D:GLN33 2.8 14.5 1.0
O D:HOH309 2.9 19.4 1.0
CD D:GLN33 3.5 15.4 1.0
CG D:GLN33 3.5 14.6 1.0
CB D:GLN33 3.6 14.1 1.0
O D:HOH368 4.3 29.4 1.0
CA D:GLN33 4.4 14.1 1.0
O D:GLN33 4.6 14.3 1.0
OE1 D:GLN33 4.6 18.2 1.0
C D:GLN33 4.8 14.1 1.0
O D:HOH332 4.9 38.1 1.0

Chlorine binding site 2 out of 3 in 1fm0

Go back to Chlorine Binding Sites List in 1fm0
Chlorine binding site 2 out of 3 in the Molybdopterin Synthase (Moad/Moae)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Molybdopterin Synthase (Moad/Moae) within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Cl301

b:22.0
occ:1.00
NH2 E:ARG39 3.2 26.6 1.0
O D:HOH316 3.4 24.9 1.0
CE E:LYS119 4.1 24.7 1.0
CZ E:ARG39 4.3 27.0 1.0
O E:HOH409 4.5 37.3 1.0
O E:HOH363 4.5 28.5 1.0
CZ E:PHE34 4.5 17.9 1.0
NH1 E:ARG39 4.6 25.8 1.0
CD E:LYS119 4.9 22.4 1.0
NZ E:LYS119 4.9 23.3 1.0

Chlorine binding site 3 out of 3 in 1fm0

Go back to Chlorine Binding Sites List in 1fm0
Chlorine binding site 3 out of 3 in the Molybdopterin Synthase (Moad/Moae)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Molybdopterin Synthase (Moad/Moae) within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Cl302

b:22.9
occ:1.00
O E:HOH315 3.0 22.2 1.0
OE1 E:GLN112 3.3 29.1 1.0
NH2 E:ARG149 3.4 24.6 1.0
CG E:GLN112 3.8 19.4 1.0
CD E:GLN112 4.0 23.4 1.0
CB E:GLN112 4.2 17.1 1.0
CZ E:ARG149 4.5 31.7 1.0
NH1 E:ARG149 4.7 34.0 1.0
OD1 E:ASP116 4.7 17.1 1.0
CA E:GLN112 4.8 16.5 1.0
OD2 E:ASP116 5.0 18.6 1.0

Reference:

M.J.Rudolph, M.M.Wuebbens, K.V.Rajagopalan, H.Schindelin. Crystal Structure of Molybdopterin Synthase and Its Evolutionary Relationship to Ubiquitin Activation. Nat.Struct.Biol. V. 8 42 2001.
ISSN: ISSN 1072-8368
PubMed: 11135669
DOI: 10.1038/83034
Page generated: Sat Dec 12 08:35:23 2020

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