Chlorine in PDB 1gac: uc(Nmr) Structure of Asymmetric Homodimer of A82846B, A Glycopeptide Antibiotic, Complexed with Its Cell Wall Pentapeptide Fragment

The binding sites of Chlorine atom in the uc(Nmr) Structure of Asymmetric Homodimer of A82846B, A Glycopeptide Antibiotic, Complexed with Its Cell Wall Pentapeptide Fragment (pdb code 1gac). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 4 binding sites of Chlorine where determined in the uc(Nmr) Structure of Asymmetric Homodimer of A82846B, A Glycopeptide Antibiotic, Complexed with Its Cell Wall Pentapeptide Fragment, PDB code: 1gac:
Jump to Chlorine binding site number: 1; 2; 3; 4;

Chlorine binding site 1 out of 4 in the uc(Nmr) Structure of Asymmetric Homodimer of A82846B, A Glycopeptide Antibiotic, Complexed with Its Cell Wall Pentapeptide Fragment


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of uc(Nmr) Structure of Asymmetric Homodimer of A82846B, A Glycopeptide Antibiotic, Complexed with Its Cell Wall Pentapeptide Fragment within 5.0Å range: probe atom residue distance (Å) B Occ C:Cl2 b:1.0 occ:1.00 CL C:OMZ2 0.0 1.0 1.0 CE1 C:OMZ2 1.7 1.0 1.0 HD2 D:OMY6 2.5 0.0 1.0 CZ C:OMZ2 2.7 1.0 1.0 CD1 C:OMZ2 2.7 1.0 1.0 H1 D:RER10 2.8 1.0 1.0 HD1 C:OMZ2 2.9 0.0 1.0 H6 C:GHP4 2.9 0.0 1.0 OH C:OMZ2 3.0 1.0 1.0 C5 C:GHP4 3.2 1.0 1.0 CD2 D:OMY6 3.2 1.0 1.0 HE2 D:OMY6 3.2 0.0 1.0 C6 C:GHP4 3.2 1.0 1.0 O B:ALA1 3.3 0.0 1.0 CE2 D:OMY6 3.5 1.0 1.0 H22C D:RER10 3.6 1.0 1.0 H21C D:RER10 3.6 1.0 1.0 C1 D:RER10 3.7 1.0 1.0 C2 D:RER10 3.9 1.0 1.0 O C:ASN3 3.9 1.0 1.0 H6C2 C:BGC8 3.9 0.0 1.0 CG C:OMZ2 4.1 1.0 1.0 CE2 C:OMZ2 4.1 1.0 1.0 HA B:FGA2 4.2 0.0 1.0 C4 C:GHP4 4.3 1.0 1.0 O5 C:BGC8 4.3 1.0 1.0 C1 C:GHP4 4.3 1.0 1.0 O6 C:BGC8 4.3 1.0 1.0 H6 C:BGC8 4.3 0.0 1.0 ODE D:OMY6 4.3 1.0 1.0 CG D:OMY6 4.3 1.0 1.0 C C:ASN3 4.4 1.0 1.0 HB2 B:ALA1 4.4 0.0 1.0 C B:ALA1 4.5 0.0 1.0 C6 C:BGC8 4.6 1.0 1.0 CD2 C:OMZ2 4.6 1.0 1.0 OXT A:DAL5 4.6 0.0 1.0 O5 D:RER10 4.7 1.0 1.0 CZ D:OMY6 4.8 1.0 1.0 HB1 B:ALA1 4.8 0.0 1.0 O4 C:GHP4 4.9 1.0 1.0 HE2 C:OMZ2 4.9 0.0 1.0 O B:FGA2 4.9 0.0 1.0 H C:ASN3 4.9 0.0 1.0 HA C:GHP4 5.0 0.0 1.0 CB D:OMY6 5.0 1.0 1.0 C B:FGA2 5.0 0.0 1.0 N C:ASN3 5.0 1.0 1.0 N C:GHP4 5.0 1.0 1.0

Chlorine binding site 2 out of 4 in the uc(Nmr) Structure of Asymmetric Homodimer of A82846B, A Glycopeptide Antibiotic, Complexed with Its Cell Wall Pentapeptide Fragment


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of uc(Nmr) Structure of Asymmetric Homodimer of A82846B, A Glycopeptide Antibiotic, Complexed with Its Cell Wall Pentapeptide Fragment within 5.0Å range: probe atom residue distance (Å) B Occ C:Cl6 b:1.0 occ:1.00 CL C:OMY6 0.0 1.0 1.0 CE1 C:OMY6 1.7 1.0 1.0 CD1 C:OMY6 2.7 1.0 1.0 CZ C:OMY6 2.7 1.0 1.0 HD1 C:OMY6 2.9 0.0 1.0 OCZ C:OMY6 3.0 1.0 1.0 HA A:DAL4 3.0 0.0 1.0 H3A2 C:RER9 3.1 1.0 1.0 OE1 A:FGA2 3.1 0.0 1.0 C3 C:GHP4 3.1 1.0 1.0 HC2 C:GHP4 3.5 0.0 1.0 C2 C:GHP4 3.5 1.0 1.0 H3A1 C:RER9 3.5 1.0 1.0 C A:DAL4 3.6 0.0 1.0 CA A:DAL4 3.6 0.0 1.0 O A:DAL4 3.7 0.0 1.0 HB3 A:DAL5 3.7 0.0 1.0 N A:DAL4 3.7 0.0 1.0 C3A C:RER9 3.8 1.0 1.0 HB1 A:DAL5 3.8 0.0 1.0 C4 C:GHP4 3.9 1.0 1.0 H5 C:RER9 3.9 0.0 1.0 O4 C:RER9 3.9 1.0 1.0 C A:LYS3 4.0 0.0 1.0 O A:LYS3 4.1 0.0 1.0 CE2 C:OMY6 4.1 1.0 1.0 CG C:OMY6 4.1 1.0 1.0 HB2 A:FGA2 4.1 0.0 1.0 N A:DAL5 4.1 0.0 1.0 H A:DAL4 4.1 0.0 1.0 CD A:FGA2 4.2 0.0 1.0 CB A:DAL5 4.2 0.0 1.0 O4 C:GHP4 4.3 1.0 1.0 HA C:GHP5 4.4 0.0 1.0 H3A3 C:RER9 4.4 1.0 1.0 H A:DAL5 4.4 0.0 1.0 C1 C:GHP4 4.4 1.0 1.0 H5A1 C:RER9 4.5 0.0 1.0 H5A2 D:RER9 4.6 0.0 1.0 CD2 C:OMY6 4.6 1.0 1.0 HA C:OMY6 4.6 0.0 1.0 HO4 C:RER9 4.6 1.0 1.0 C5 C:RER9 4.7 1.0 1.0 C4 C:RER9 4.8 1.0 1.0 H5A3 D:RER9 4.8 0.0 1.0 C5 C:GHP4 4.8 1.0 1.0 H1 C:BGC8 4.8 0.0 1.0 O C:GHP4 4.8 1.0 1.0 HA A:LYS3 4.8 0.0 1.0 CA A:DAL5 4.8 0.0 1.0 CA A:LYS3 4.9 0.0 1.0 HE2 C:OMY6 4.9 0.0 1.0 C C:GHP4 4.9 1.0 1.0 C3 C:RER9 4.9 1.0 1.0 CB A:FGA2 5.0 0.0 1.0 N A:LYS3 5.0 0.0 1.0 C6 C:GHP4 5.0 1.0 1.0

Chlorine binding site 3 out of 4 in the uc(Nmr) Structure of Asymmetric Homodimer of A82846B, A Glycopeptide Antibiotic, Complexed with Its Cell Wall Pentapeptide Fragment


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of uc(Nmr) Structure of Asymmetric Homodimer of A82846B, A Glycopeptide Antibiotic, Complexed with Its Cell Wall Pentapeptide Fragment within 5.0Å range: probe atom residue distance (Å) B Occ D:Cl2 b:1.0 occ:1.00 CL D:OMZ2 0.0 1.0 1.0 CE1 D:OMZ2 1.7 1.0 1.0 CZ D:OMZ2 2.7 1.0 1.0 CD1 D:OMZ2 2.7 1.0 1.0 HD1 D:OMZ2 2.9 0.0 1.0 H1 C:RER10 2.9 1.0 1.0 OH D:OMZ2 3.0 1.0 1.0 H5A1 D:RER9 3.3 0.0 1.0 H21C C:RER10 3.3 1.0 1.0 H5 D:RER9 3.3 0.0 1.0 HD2 C:OMY6 3.5 0.0 1.0 O4 D:RER9 3.5 1.0 1.0 HA A:FGA2 3.6 0.0 1.0 C A:FGA2 3.7 0.0 1.0 C1 C:RER10 3.8 1.0 1.0 H3A2 D:RER9 3.8 1.0 1.0 C2 C:RER10 3.9 1.0 1.0 H22C C:RER10 3.9 1.0 1.0 H3A3 D:RER9 3.9 1.0 1.0 C5 D:GHP4 3.9 1.0 1.0 CD2 C:OMY6 3.9 1.0 1.0 H6 D:GHP4 4.0 0.0 1.0 C5 D:RER9 4.0 1.0 1.0 C5A D:RER9 4.0 1.0 1.0 CE2 D:OMZ2 4.1 1.0 1.0 CG D:OMZ2 4.1 1.0 1.0 HE2 C:OMY6 4.2 0.0 1.0 CA A:FGA2 4.2 0.0 1.0 HO4 D:RER9 4.3 1.0 1.0 CE2 C:OMY6 4.3 1.0 1.0 C6 D:GHP4 4.3 1.0 1.0 H5A2 D:RER9 4.3 0.0 1.0 O A:ALA1 4.3 0.0 1.0 C3A D:RER9 4.4 1.0 1.0 C4 D:RER9 4.4 1.0 1.0 O5 C:RER10 4.5 1.0 1.0 CD2 D:OMZ2 4.6 1.0 1.0 O A:FGA2 4.6 0.0 1.0 HB2 A:FGA2 4.7 0.0 1.0 ODE C:OMY6 4.8 1.0 1.0 CG C:OMY6 4.8 1.0 1.0 HE2 D:OMZ2 4.9 0.0 1.0 H5A3 D:RER9 5.0 0.0 1.0 O D:ASN3 5.0 1.0 1.0

Chlorine binding site 4 out of 4 in the uc(Nmr) Structure of Asymmetric Homodimer of A82846B, A Glycopeptide Antibiotic, Complexed with Its Cell Wall Pentapeptide Fragment


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of uc(Nmr) Structure of Asymmetric Homodimer of A82846B, A Glycopeptide Antibiotic, Complexed with Its Cell Wall Pentapeptide Fragment within 5.0Å range: probe atom residue distance (Å) B Occ D:Cl6 b:1.0 occ:1.00 CL D:OMY6 0.0 1.0 1.0 CE1 D:OMY6 1.7 1.0 1.0 HB2 B:FGA2 2.6 0.0 1.0 CD1 D:OMY6 2.7 1.0 1.0 CZ D:OMY6 2.7 1.0 1.0 HD1 D:OMY6 2.9 0.0 1.0 OCZ D:OMY6 3.0 1.0 1.0 OE1 B:FGA2 3.0 0.0 1.0 H6C1 D:BGC8 3.0 0.0 1.0 C3 D:GHP4 3.1 1.0 1.0 HC2 D:GHP4 3.2 0.0 1.0 C2 D:GHP4 3.3 1.0 1.0 HA B:DAL4 3.3 0.0 1.0 HB1 B:DAL5 3.4 0.0 1.0 HB3 B:DAL5 3.5 0.0 1.0 O5 D:BGC8 3.7 1.0 1.0 CB B:FGA2 3.7 0.0 1.0 C B:DAL4 3.8 0.0 1.0 O6 D:BGC8 3.8 1.0 1.0 C6 D:BGC8 3.8 1.0 1.0 H6 D:BGC8 3.8 0.0 1.0 CA B:DAL4 3.9 0.0 1.0 CD B:FGA2 3.9 0.0 1.0 CB B:DAL5 3.9 0.0 1.0 O B:DAL4 4.0 0.0 1.0 N B:DAL4 4.0 0.0 1.0 H B:DAL4 4.0 0.0 1.0 CE2 D:OMY6 4.1 1.0 1.0 C4 D:GHP4 4.1 1.0 1.0 CG D:OMY6 4.1 1.0 1.0 N B:DAL5 4.1 0.0 1.0 HB3 B:FGA2 4.2 0.0 1.0 C B:FGA2 4.2 0.0 1.0 HA D:GHP5 4.3 0.0 1.0 CG B:FGA2 4.3 0.0 1.0 C5 D:BGC8 4.3 1.0 1.0 CA B:FGA2 4.4 0.0 1.0 C1 D:GHP4 4.4 1.0 1.0 HA B:FGA2 4.4 0.0 1.0 H B:DAL5 4.4 0.0 1.0 HG3 B:FGA2 4.4 0.0 1.0 HA D:OMY6 4.6 0.0 1.0 CD2 D:OMY6 4.6 1.0 1.0 O4 D:GHP4 4.6 1.0 1.0 CA B:DAL5 4.7 0.0 1.0 H6C2 D:BGC8 4.7 0.0 1.0 C1 D:BGC8 4.7 1.0 1.0 H6C2 C:BGC8 4.7 0.0 1.0 C B:LYS3 4.8 0.0 1.0 H5 D:BGC8 4.8 0.0 1.0 O D:GHP4 4.8 1.0 1.0 HB2 B:DAL5 4.8 0.0 1.0 C D:GHP4 4.8 1.0 1.0 HE2 D:OMY6 4.9 0.0 1.0 C5 D:GHP4 5.0 1.0 1.0

W.G.Prowse, A.D.Kline, M.A.Skelton, R.J.Loncharich. Conformation of A82846B, A Glycopeptide Antibiotic, Complexed with Its Cell Wall Fragment: An Asymmetric Homodimer Determined Using uc(Nmr) Spectroscopy. Biochemistry V. 34 9632 1995.
ISSN: ISSN 0006-2960
PubMed: 7626632
DOI: 10.1021/BI00029A041