Chlorine in PDB 1h01: CDK2 in Complex with A Disubstituted 2, 4-Bis Anilino Pyrimidine CDK4 Inhibitor
Enzymatic activity of CDK2 in Complex with A Disubstituted 2, 4-Bis Anilino Pyrimidine CDK4 Inhibitor
All present enzymatic activity of CDK2 in Complex with A Disubstituted 2, 4-Bis Anilino Pyrimidine CDK4 Inhibitor:
2.7.11.22;
Protein crystallography data
The structure of CDK2 in Complex with A Disubstituted 2, 4-Bis Anilino Pyrimidine CDK4 Inhibitor, PDB code: 1h01
was solved by
G.A.Breault,
R.P.A.Ellston,
S.Green,
S.R.James,
P.J.Jewsbury,
C.J.Midgley,
C.A.Minshull,
R.A.Pauptit,
J.A.Tucker,
J.E.Pease,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
31.77 /
1.79
|
Space group
|
P 21 21 21
|
Cell size a, b, c (Å), α, β, γ (°)
|
53.131,
70.698,
72.483,
90.00,
90.00,
90.00
|
R / Rfree (%)
|
n/a /
n/a
|
Chlorine Binding Sites:
The binding sites of Chlorine atom in the CDK2 in Complex with A Disubstituted 2, 4-Bis Anilino Pyrimidine CDK4 Inhibitor
(pdb code 1h01). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 4 binding sites of Chlorine where determined in the
CDK2 in Complex with A Disubstituted 2, 4-Bis Anilino Pyrimidine CDK4 Inhibitor, PDB code: 1h01:
Jump to Chlorine binding site number:
1;
2;
3;
4;
Chlorine binding site 1 out
of 4 in 1h01
Go back to
Chlorine Binding Sites List in 1h01
Chlorine binding site 1 out
of 4 in the CDK2 in Complex with A Disubstituted 2, 4-Bis Anilino Pyrimidine CDK4 Inhibitor
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of CDK2 in Complex with A Disubstituted 2, 4-Bis Anilino Pyrimidine CDK4 Inhibitor within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl301
b:20.4
occ:0.50
|
CL29
|
A:FAL301
|
0.0
|
20.4
|
0.5
|
CL29
|
A:FBL302
|
0.0
|
20.4
|
0.5
|
C9
|
A:FAL301
|
1.8
|
17.2
|
0.5
|
C9
|
A:FBL302
|
1.8
|
17.2
|
0.5
|
C10
|
A:FAL301
|
2.7
|
16.8
|
0.5
|
C10
|
A:FBL302
|
2.7
|
16.8
|
0.5
|
C8
|
A:FAL301
|
2.8
|
13.7
|
0.5
|
C8
|
A:FBL302
|
2.8
|
13.7
|
0.5
|
N7
|
A:FAL301
|
3.1
|
13.3
|
0.5
|
N7
|
A:FBL302
|
3.1
|
13.3
|
0.5
|
OD2
|
A:ASP145
|
3.2
|
14.6
|
1.0
|
O
|
A:HOH2103
|
3.3
|
14.6
|
1.0
|
CG
|
A:ASP145
|
3.3
|
15.0
|
1.0
|
OD1
|
A:ASP145
|
3.4
|
16.0
|
1.0
|
CB
|
A:ALA144
|
3.7
|
7.1
|
1.0
|
CB
|
A:ASN132
|
3.9
|
7.7
|
1.0
|
C11
|
A:FAL301
|
4.1
|
15.0
|
0.5
|
C11
|
A:FBL302
|
4.1
|
15.0
|
0.5
|
C13
|
A:FAL301
|
4.1
|
11.8
|
0.5
|
C13
|
A:FBL302
|
4.1
|
11.8
|
0.5
|
CB
|
A:ASP145
|
4.3
|
13.1
|
1.0
|
CA
|
A:ASN132
|
4.3
|
9.3
|
1.0
|
C4
|
A:FAL301
|
4.3
|
12.2
|
0.5
|
C4
|
A:FBL302
|
4.3
|
12.2
|
0.5
|
NZ
|
A:KCX33
|
4.3
|
16.2
|
1.0
|
O1
|
A:GOL300
|
4.4
|
36.2
|
1.0
|
O
|
A:HOH2105
|
4.4
|
13.9
|
1.0
|
O
|
A:GLN131
|
4.5
|
12.5
|
1.0
|
C
|
A:ALA144
|
4.5
|
10.1
|
1.0
|
C12
|
A:FAL301
|
4.6
|
15.2
|
0.5
|
C12
|
A:FBL302
|
4.6
|
15.2
|
0.5
|
N
|
A:ASP145
|
4.6
|
11.1
|
1.0
|
CA
|
A:ALA144
|
4.7
|
9.2
|
1.0
|
O
|
A:ALA144
|
4.8
|
9.6
|
1.0
|
OQ1
|
A:KCX33
|
4.8
|
14.3
|
1.0
|
CX
|
A:KCX33
|
5.0
|
16.5
|
1.0
|
|
Chlorine binding site 2 out
of 4 in 1h01
Go back to
Chlorine Binding Sites List in 1h01
Chlorine binding site 2 out
of 4 in the CDK2 in Complex with A Disubstituted 2, 4-Bis Anilino Pyrimidine CDK4 Inhibitor
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of CDK2 in Complex with A Disubstituted 2, 4-Bis Anilino Pyrimidine CDK4 Inhibitor within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl301
b:18.1
occ:0.50
|
CL30
|
A:FAL301
|
0.0
|
18.1
|
0.5
|
CL30
|
A:FBL302
|
0.0
|
18.1
|
0.5
|
C12
|
A:FAL301
|
1.7
|
15.2
|
0.5
|
C12
|
A:FBL302
|
1.7
|
15.2
|
0.5
|
C13
|
A:FAL301
|
2.7
|
11.8
|
0.5
|
C13
|
A:FBL302
|
2.7
|
11.8
|
0.5
|
C11
|
A:FAL301
|
2.8
|
15.0
|
0.5
|
C11
|
A:FBL302
|
2.8
|
15.0
|
0.5
|
CA
|
A:GLY11
|
3.2
|
16.0
|
1.0
|
N
|
A:GLY11
|
3.4
|
16.6
|
1.0
|
CG2
|
A:ILE10
|
3.4
|
24.3
|
0.5
|
C
|
A:GLY11
|
3.5
|
15.2
|
1.0
|
CG2
|
A:ILE10
|
3.5
|
24.1
|
0.5
|
N
|
A:GLU12
|
3.7
|
15.1
|
1.0
|
C
|
A:ILE10
|
3.7
|
18.2
|
1.0
|
O
|
A:HOH2008
|
3.8
|
16.4
|
1.0
|
O
|
A:ILE10
|
3.8
|
18.4
|
1.0
|
C17
|
A:FAL301
|
4.0
|
14.4
|
0.5
|
C17
|
A:FBL302
|
4.0
|
14.4
|
0.5
|
C8
|
A:FAL301
|
4.0
|
13.7
|
0.5
|
C8
|
A:FBL302
|
4.0
|
13.7
|
0.5
|
C10
|
A:FAL301
|
4.1
|
16.8
|
0.5
|
C10
|
A:FBL302
|
4.1
|
16.8
|
0.5
|
O
|
A:GLY11
|
4.1
|
14.7
|
1.0
|
CB
|
A:VAL18
|
4.2
|
11.9
|
1.0
|
C22
|
A:FAL301
|
4.2
|
22.0
|
0.5
|
C22
|
A:FBL302
|
4.2
|
22.0
|
0.5
|
O
|
A:HOH2242
|
4.2
|
17.2
|
1.0
|
CB
|
A:ILE10
|
4.2
|
21.5
|
1.0
|
O
|
A:HOH2060
|
4.3
|
13.1
|
1.0
|
C16
|
A:FAL301
|
4.4
|
13.1
|
0.5
|
C16
|
A:FBL302
|
4.4
|
13.1
|
0.5
|
CG2
|
A:VAL18
|
4.4
|
14.1
|
1.0
|
C
|
A:GLU12
|
4.6
|
15.0
|
1.0
|
C9
|
A:FAL301
|
4.6
|
17.2
|
0.5
|
C9
|
A:FBL302
|
4.6
|
17.2
|
0.5
|
O
|
A:GLU12
|
4.6
|
14.7
|
1.0
|
CA
|
A:GLU12
|
4.6
|
15.3
|
1.0
|
CA
|
A:ILE10
|
4.6
|
20.4
|
1.0
|
C18
|
A:FAL301
|
4.7
|
15.9
|
0.5
|
C18
|
A:FBL302
|
4.7
|
15.9
|
0.5
|
CG1
|
A:VAL18
|
4.8
|
12.8
|
1.0
|
O21
|
A:FAL301
|
4.9
|
18.4
|
0.5
|
O21
|
A:FBL302
|
4.9
|
18.4
|
0.5
|
|
Chlorine binding site 3 out
of 4 in 1h01
Go back to
Chlorine Binding Sites List in 1h01
Chlorine binding site 3 out
of 4 in the CDK2 in Complex with A Disubstituted 2, 4-Bis Anilino Pyrimidine CDK4 Inhibitor
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 3 of CDK2 in Complex with A Disubstituted 2, 4-Bis Anilino Pyrimidine CDK4 Inhibitor within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl302
b:20.4
occ:0.50
|
CL29
|
A:FAL301
|
0.0
|
20.4
|
0.5
|
CL29
|
A:FBL302
|
0.0
|
20.4
|
0.5
|
C9
|
A:FAL301
|
1.8
|
17.2
|
0.5
|
C9
|
A:FBL302
|
1.8
|
17.2
|
0.5
|
C10
|
A:FAL301
|
2.7
|
16.8
|
0.5
|
C10
|
A:FBL302
|
2.7
|
16.8
|
0.5
|
C8
|
A:FAL301
|
2.8
|
13.7
|
0.5
|
C8
|
A:FBL302
|
2.8
|
13.7
|
0.5
|
N7
|
A:FAL301
|
3.1
|
13.3
|
0.5
|
N7
|
A:FBL302
|
3.1
|
13.3
|
0.5
|
OD2
|
A:ASP145
|
3.2
|
14.6
|
1.0
|
O
|
A:HOH2103
|
3.3
|
14.6
|
1.0
|
CG
|
A:ASP145
|
3.3
|
15.0
|
1.0
|
OD1
|
A:ASP145
|
3.4
|
16.0
|
1.0
|
CB
|
A:ALA144
|
3.7
|
7.1
|
1.0
|
CB
|
A:ASN132
|
3.9
|
7.7
|
1.0
|
C11
|
A:FAL301
|
4.1
|
15.0
|
0.5
|
C11
|
A:FBL302
|
4.1
|
15.0
|
0.5
|
C13
|
A:FAL301
|
4.1
|
11.8
|
0.5
|
C13
|
A:FBL302
|
4.1
|
11.8
|
0.5
|
CB
|
A:ASP145
|
4.3
|
13.1
|
1.0
|
CA
|
A:ASN132
|
4.3
|
9.3
|
1.0
|
C4
|
A:FAL301
|
4.3
|
12.2
|
0.5
|
C4
|
A:FBL302
|
4.3
|
12.2
|
0.5
|
NZ
|
A:KCX33
|
4.3
|
16.2
|
1.0
|
O1
|
A:GOL300
|
4.4
|
36.2
|
1.0
|
O
|
A:HOH2105
|
4.4
|
13.9
|
1.0
|
O
|
A:GLN131
|
4.5
|
12.5
|
1.0
|
C
|
A:ALA144
|
4.5
|
10.1
|
1.0
|
C12
|
A:FAL301
|
4.6
|
15.2
|
0.5
|
C12
|
A:FBL302
|
4.6
|
15.2
|
0.5
|
N
|
A:ASP145
|
4.6
|
11.1
|
1.0
|
CA
|
A:ALA144
|
4.7
|
9.2
|
1.0
|
O
|
A:ALA144
|
4.8
|
9.6
|
1.0
|
OQ1
|
A:KCX33
|
4.8
|
14.3
|
1.0
|
CX
|
A:KCX33
|
5.0
|
16.5
|
1.0
|
|
Chlorine binding site 4 out
of 4 in 1h01
Go back to
Chlorine Binding Sites List in 1h01
Chlorine binding site 4 out
of 4 in the CDK2 in Complex with A Disubstituted 2, 4-Bis Anilino Pyrimidine CDK4 Inhibitor
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 4 of CDK2 in Complex with A Disubstituted 2, 4-Bis Anilino Pyrimidine CDK4 Inhibitor within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl302
b:18.1
occ:0.50
|
CL30
|
A:FAL301
|
0.0
|
18.1
|
0.5
|
CL30
|
A:FBL302
|
0.0
|
18.1
|
0.5
|
C12
|
A:FAL301
|
1.7
|
15.2
|
0.5
|
C12
|
A:FBL302
|
1.7
|
15.2
|
0.5
|
C13
|
A:FAL301
|
2.7
|
11.8
|
0.5
|
C13
|
A:FBL302
|
2.7
|
11.8
|
0.5
|
C11
|
A:FAL301
|
2.8
|
15.0
|
0.5
|
C11
|
A:FBL302
|
2.8
|
15.0
|
0.5
|
CA
|
A:GLY11
|
3.2
|
16.0
|
1.0
|
N
|
A:GLY11
|
3.4
|
16.6
|
1.0
|
CG2
|
A:ILE10
|
3.4
|
24.3
|
0.5
|
C
|
A:GLY11
|
3.5
|
15.2
|
1.0
|
CG2
|
A:ILE10
|
3.5
|
24.1
|
0.5
|
N
|
A:GLU12
|
3.7
|
15.1
|
1.0
|
C
|
A:ILE10
|
3.7
|
18.2
|
1.0
|
O
|
A:HOH2008
|
3.8
|
16.4
|
1.0
|
O
|
A:ILE10
|
3.8
|
18.4
|
1.0
|
C17
|
A:FAL301
|
4.0
|
14.4
|
0.5
|
C17
|
A:FBL302
|
4.0
|
14.4
|
0.5
|
C8
|
A:FAL301
|
4.0
|
13.7
|
0.5
|
C8
|
A:FBL302
|
4.0
|
13.7
|
0.5
|
C10
|
A:FAL301
|
4.1
|
16.8
|
0.5
|
C10
|
A:FBL302
|
4.1
|
16.8
|
0.5
|
O
|
A:GLY11
|
4.1
|
14.7
|
1.0
|
CB
|
A:VAL18
|
4.2
|
11.9
|
1.0
|
C22
|
A:FAL301
|
4.2
|
22.0
|
0.5
|
C22
|
A:FBL302
|
4.2
|
22.0
|
0.5
|
O
|
A:HOH2242
|
4.2
|
17.2
|
1.0
|
CB
|
A:ILE10
|
4.2
|
21.5
|
1.0
|
O
|
A:HOH2060
|
4.3
|
13.1
|
1.0
|
C16
|
A:FAL301
|
4.4
|
13.1
|
0.5
|
C16
|
A:FBL302
|
4.4
|
13.1
|
0.5
|
CG2
|
A:VAL18
|
4.4
|
14.1
|
1.0
|
C
|
A:GLU12
|
4.6
|
15.0
|
1.0
|
C9
|
A:FAL301
|
4.6
|
17.2
|
0.5
|
C9
|
A:FBL302
|
4.6
|
17.2
|
0.5
|
O
|
A:GLU12
|
4.6
|
14.7
|
1.0
|
CA
|
A:GLU12
|
4.6
|
15.3
|
1.0
|
CA
|
A:ILE10
|
4.6
|
20.4
|
1.0
|
C18
|
A:FAL301
|
4.7
|
15.9
|
0.5
|
C18
|
A:FBL302
|
4.7
|
15.9
|
0.5
|
CG1
|
A:VAL18
|
4.8
|
12.8
|
1.0
|
O21
|
A:FAL301
|
4.9
|
18.4
|
0.5
|
O21
|
A:FBL302
|
4.9
|
18.4
|
0.5
|
|
Reference:
J.F.Beattie,
G.A.Breault,
R.P.A.Ellston,
S.Green,
P.J.Jewsbury,
C.J.Midgley,
R.T.Naven,
C.A.Minshull,
R.A.Pauptit,
J.A.Tucker,
J.E.Pease.
Cyclin-Dependent Kinase 4 Inhibitors As A Treatment For Cancer. Part 1: Identification and Optimisation of Substituted 4,6-Bis Anilino Pyrimidines Bioorg.Med.Chem.Lett. V. 13 2955 2003.
ISSN: ISSN 0960-894X
PubMed: 12941311
DOI: 10.1016/S0960-894X(03)00202-6
Page generated: Fri Jul 19 22:23:29 2024
|