Chlorine in PDB 1id9: Structure of the Hybrid Rna/Dna R-Gcuucggc-D[F]U in Presence of Rh(NH3)6+++

The structure of Structure of the Hybrid Rna/Dna R-Gcuucggc-D[F]U in Presence of Rh(NH3)6+++, PDB code: 1id9 was solved by W.Cruse, P.Saludjian, A.Neuman, T.Prange, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	11.00 / 1.60
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	53.730, 19.390, 45.830, 90.00, 105.70, 90.00
R / Rfree (%)	15.3 / 19.5

The structure of Structure of the Hybrid Rna/Dna R-Gcuucggc-D[F]U in Presence of Rh(NH3)6+++ also contains other interesting chemical elements:

Fluorine	(F)	3 atoms
Rhodium	(Rh)	2 atoms

The binding sites of Chlorine atom in the Structure of the Hybrid Rna/Dna R-Gcuucggc-D[F]U in Presence of Rh(NH3)6+++ (pdb code 1id9). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Structure of the Hybrid Rna/Dna R-Gcuucggc-D[F]U in Presence of Rh(NH3)6+++, PDB code: 1id9:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in the Structure of the Hybrid Rna/Dna R-Gcuucggc-D[F]U in Presence of Rh(NH3)6+++


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of the Hybrid Rna/Dna R-Gcuucggc-D[F]U in Presence of Rh(NH3)6+++ within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl32 b:23.2 occ:1.00 O A:HOH147 4.8 62.5 1.0 O4 A:UFP9 4.9 21.4 1.0

Chlorine binding site 2 out of 2 in the Structure of the Hybrid Rna/Dna R-Gcuucggc-D[F]U in Presence of Rh(NH3)6+++


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Structure of the Hybrid Rna/Dna R-Gcuucggc-D[F]U in Presence of Rh(NH3)6+++ within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl31 b:15.5 occ:1.00 N7 B:G6 4.1 21.6 1.0 O A:HOH111 4.2 26.9 1.0 O6 B:G6 4.3 15.5 1.0 O B:HOH110 4.3 25.3 1.0 O6 B:G7 4.3 19.9 1.0 C5 B:G6 4.9 18.3 1.0 C6 B:G6 4.9 15.7 1.0 N4 A:C2 4.9 21.7 1.0

W.Cruse, P.Saludjian, A.Neuman, T.Prange. Destabilizing Effect of A Fluorouracil Extra Base in A Hybrid Rna Duplex Compared with Bromo and Chloro Analogues. Acta Crystallogr.,Sect.D V. 57 1609 2001.
ISSN: ISSN 0907-4449
PubMed: 11679725
DOI: 10.1107/S0907444901012318