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Chlorine in PDB 1iqk: Human Coagulation Factor Xa in Complex with M55113

Enzymatic activity of Human Coagulation Factor Xa in Complex with M55113

All present enzymatic activity of Human Coagulation Factor Xa in Complex with M55113:
3.4.21.6;

Protein crystallography data

The structure of Human Coagulation Factor Xa in Complex with M55113, PDB code: 1iqk was solved by I.Shiromizu, T.Matsusue, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 8.00 / 3.20
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 71.960, 78.920, 56.140, 90.00, 90.00, 90.00
R / Rfree (%) n/a / n/a

Other elements in 1iqk:

The structure of Human Coagulation Factor Xa in Complex with M55113 also contains other interesting chemical elements:

Calcium (Ca) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Human Coagulation Factor Xa in Complex with M55113 (pdb code 1iqk). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Human Coagulation Factor Xa in Complex with M55113, PDB code: 1iqk:

Chlorine binding site 1 out of 1 in 1iqk

Go back to Chlorine Binding Sites List in 1iqk
Chlorine binding site 1 out of 1 in the Human Coagulation Factor Xa in Complex with M55113


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Human Coagulation Factor Xa in Complex with M55113 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl401

b:8.6
occ:1.00
CL30 A:XMI401 0.0 8.6 1.0
C34 A:XMI401 1.8 11.9 1.0
C32 A:XMI401 2.8 11.6 1.0
C33 A:XMI401 2.8 11.9 1.0
CZ A:TYR228 3.3 2.0 1.0
CE2 A:TYR228 3.4 2.2 1.0
O A:ILE227 3.5 7.0 1.0
N A:ILE227 3.6 3.8 1.0
CE1 A:TYR228 3.6 3.1 1.0
OH A:TYR228 3.7 6.0 1.0
C A:GLY226 3.7 4.2 1.0
CA A:GLY226 3.7 4.6 1.0
CD2 A:TYR228 3.8 2.0 1.0
C A:ILE227 3.9 5.3 1.0
O A:TRP215 3.9 2.0 1.0
CD1 A:TYR228 4.0 3.1 1.0
CG A:TYR228 4.1 2.5 1.0
C26 A:XMI401 4.1 11.2 1.0
C31 A:XMI401 4.1 10.8 1.0
CB A:ALA190 4.3 2.0 1.0
CA A:ILE227 4.3 4.4 1.0
CG1 A:VAL213 4.4 2.0 1.0
O A:GLY226 4.4 2.0 1.0
OD1 A:ASP189 4.5 17.4 1.0
N A:SER214 4.5 7.6 1.0
N A:TYR228 4.6 3.7 1.0
CA A:VAL213 4.6 3.3 1.0
C29 A:XMI401 4.7 10.1 1.0
C A:TRP215 4.8 3.8 1.0
CB A:VAL213 4.9 2.0 1.0
CG2 A:VAL213 4.9 2.0 1.0
CA A:TYR228 4.9 3.0 1.0
N A:TRP215 5.0 7.0 1.0
C A:VAL213 5.0 5.2 1.0

Reference:

T.Matsusue, I.Shiromizu, A.Okamoto, K.Nakayama, H.Nishida, T.Mukaihira, Y.Miyazaki, F.Saitou, H.Morishita, S.Ohnishi, H.Mochizuki. Factor Xa Specific Inhibitor That Induces the Novel Binding Model in Complex with Human Fxa To Be Published.
Page generated: Sat Dec 12 08:38:10 2020

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