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Chlorine in PDB 1iz7: Re-Refinement of the Structure of Hydrolytic Haloalkane Dehalogenase Linb From Sphingomonas Paucimobilis UT26 at 1.6 A Resolution

Protein crystallography data

The structure of Re-Refinement of the Structure of Hydrolytic Haloalkane Dehalogenase Linb From Sphingomonas Paucimobilis UT26 at 1.6 A Resolution, PDB code: 1iz7 was solved by V.A.Streltsov, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.86 / 1.58
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 50.264, 71.669, 72.698, 90.00, 90.00, 90.00
R / Rfree (%) 14 / 17.8

Other elements in 1iz7:

The structure of Re-Refinement of the Structure of Hydrolytic Haloalkane Dehalogenase Linb From Sphingomonas Paucimobilis UT26 at 1.6 A Resolution also contains other interesting chemical elements:

Calcium (Ca) 3 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Re-Refinement of the Structure of Hydrolytic Haloalkane Dehalogenase Linb From Sphingomonas Paucimobilis UT26 at 1.6 A Resolution (pdb code 1iz7). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Re-Refinement of the Structure of Hydrolytic Haloalkane Dehalogenase Linb From Sphingomonas Paucimobilis UT26 at 1.6 A Resolution, PDB code: 1iz7:

Chlorine binding site 1 out of 1 in 1iz7

Go back to Chlorine Binding Sites List in 1iz7
Chlorine binding site 1 out of 1 in the Re-Refinement of the Structure of Hydrolytic Haloalkane Dehalogenase Linb From Sphingomonas Paucimobilis UT26 at 1.6 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Re-Refinement of the Structure of Hydrolytic Haloalkane Dehalogenase Linb From Sphingomonas Paucimobilis UT26 at 1.6 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl2001

b:16.5
occ:1.00
O A:HOH1001 2.6 29.6 1.0
O A:HOH1322 3.1 26.2 1.0
NE1 A:TRP109 3.3 3.8 1.0
ND2 A:ASN38 3.4 6.5 1.0
N A:PRO208 3.5 3.2 1.0
CA A:PRO208 3.5 4.5 1.0
CD A:PRO208 3.6 4.8 1.0
CZ A:PHE169 3.6 9.6 1.0
C A:TRP207 3.7 5.5 1.0
CD1 A:TRP109 3.8 6.9 1.0
CD1 A:ILE211 3.8 12.0 1.0
CB A:TRP207 3.9 4.5 1.0
CB A:PRO208 3.9 5.2 1.0
CB A:ASN38 3.9 5.0 1.0
CE2 A:PHE169 4.0 7.8 1.0
O A:TRP207 4.0 5.6 1.0
CG1 A:ILE211 4.1 6.9 1.0
CG A:ASN38 4.2 6.4 1.0
CE2 A:PHE151 4.2 4.4 1.0
CG A:PRO208 4.4 5.0 1.0
CA A:TRP207 4.5 5.3 1.0
CE2 A:TRP109 4.6 3.6 1.0
O A:HOH1317 4.6 34.9 1.0
CE1 A:PHE169 4.6 6.1 1.0
OD1 A:ASP108 4.7 18.3 1.0
OD2 A:ASP108 4.8 7.9 1.0
C A:PRO208 4.9 6.2 1.0
CG A:TRP207 5.0 5.5 1.0

Reference:

V.A.Streltsov, Z.Prokop, J.Damborsky, Y.Nagata, A.Oakley, M.C.J.Wilce. Haloalkane Dehalogenase Linb From Sphingomonas Paucimobilis UT26: X-Ray Crystallographic Studies of Dehalogenation of Brominated Substrates Biochemistry V. 42 10104 2003.
ISSN: ISSN 0006-2960
PubMed: 12939138
DOI: 10.1021/BI027280A
Page generated: Sat Dec 12 08:38:21 2020

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