Chlorine in PDB 1j3l: Structure of the Rna-Processing Inhibitor Rraa From Thermus Thermophilis

The structure of Structure of the Rna-Processing Inhibitor Rraa From Thermus Thermophilis, PDB code: 1j3l was solved by P.H.Rehse, M.Miyano, T.H.Tahirov, Riken Structuralgenomics/Proteomics Initiative (Rsgi), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	38.40 / 2.30
Space group	C 2 2 21
Cell size a, b, c (Å), α, β, γ (°)	61.872, 109.068, 270.319, 90.00, 90.00, 90.00
R / Rfree (%)	20.6 / 27.4

The structure of Structure of the Rna-Processing Inhibitor Rraa From Thermus Thermophilis also contains other interesting chemical elements:

Magnesium

(Mg)

1 atom

The binding sites of Chlorine atom in the Structure of the Rna-Processing Inhibitor Rraa From Thermus Thermophilis (pdb code 1j3l). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Structure of the Rna-Processing Inhibitor Rraa From Thermus Thermophilis, PDB code: 1j3l:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in the Structure of the Rna-Processing Inhibitor Rraa From Thermus Thermophilis


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of the Rna-Processing Inhibitor Rraa From Thermus Thermophilis within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl1002 b:30.2 occ:1.00 N A:GLY74 3.0 23.6 1.0 CA A:GLY74 3.1 13.2 1.0 O A:HOH1079 3.2 54.8 1.0 N A:LEU77 3.3 21.6 1.0 O A:HOH1065 3.3 47.9 1.0 C A:GLY74 3.4 19.8 1.0 O A:HOH1032 3.6 35.2 1.0 CG A:LEU77 3.6 27.4 1.0 N A:ASN76 3.7 34.8 1.0 CB A:ASN76 3.7 31.7 1.0 O A:GLY74 3.8 18.1 1.0 CB A:LEU77 3.8 17.7 1.0 N A:GLY75 4.0 21.1 1.0 CA A:ASN76 4.0 28.7 1.0 C A:ASN76 4.1 20.7 1.0 CA A:LEU77 4.2 26.4 1.0 CD1 A:LEU77 4.2 16.8 1.0 C A:LEU73 4.2 23.0 1.0 O A:HOH1078 4.3 54.2 1.0 ND2 A:ASN76 4.4 52.5 1.0 CG A:ASN76 4.5 41.1 1.0 C A:GLY75 4.5 26.7 1.0 CA A:LEU73 4.7 18.7 1.0 CD2 A:LEU77 4.8 18.1 1.0 CA A:GLY75 4.9 18.8 1.0 NH2 A:ARG48 5.0 40.5 1.0

Chlorine binding site 2 out of 2 in the Structure of the Rna-Processing Inhibitor Rraa From Thermus Thermophilis


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Structure of the Rna-Processing Inhibitor Rraa From Thermus Thermophilis within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl1003 b:27.8 occ:1.00 O B:HOH1049 2.7 34.9 1.0 N B:ALA29 3.1 21.3 1.0 N B:ARG30 3.2 22.4 1.0 CA B:ARG28 3.7 16.4 1.0 CB B:ARG30 3.7 16.1 1.0 C B:ARG28 3.8 23.5 1.0 CD B:ARG28 3.8 24.5 1.0 CG B:ARG30 3.9 22.3 1.0 CA B:ARG30 4.0 21.5 1.0 CB B:ARG28 4.0 21.9 1.0 CA B:ALA29 4.0 19.2 1.0 C B:ALA29 4.1 27.0 1.0 O B:ARG30 4.2 18.1 1.0 O B:HOH1028 4.3 30.8 1.0 CD B:ARG30 4.4 23.5 1.0 CB B:ALA29 4.4 20.2 1.0 O B:HOH1096 4.4 50.0 1.0 CG B:ARG28 4.5 29.6 1.0 C B:ARG30 4.6 22.3 1.0 O B:ARG28 4.9 27.9 1.0 O B:HOH1017 5.0 26.5 1.0

P.H.Rehse, C.Kuroishi, T.H.Tahirov. Structure of the Rna-Processing Inhibitor Rraa From Thermus Thermophilis. Acta Crystallogr.,Sect.D V. 60 1997 2004.
ISSN: ISSN 0907-4449
PubMed: 15502308
DOI: 10.1107/S0907444904021146