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Chlorine in PDB 1jdn: Crystal Structure of Hormone Receptor

Protein crystallography data

The structure of Crystal Structure of Hormone Receptor, PDB code: 1jdn was solved by X.-L.He, D.-C.Chow, M.M.Martick, K.C.Garcia, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 2.90
Space group P 61 2 2
Cell size a, b, c (Å), α, β, γ (°) 217.189, 217.189, 130.793, 90.00, 90.00, 120.00
R / Rfree (%) 24.3 / 25.6

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Hormone Receptor (pdb code 1jdn). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Hormone Receptor, PDB code: 1jdn:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 1jdn

Go back to Chlorine Binding Sites List in 1jdn
Chlorine binding site 1 out of 2 in the Crystal Structure of Hormone Receptor


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Hormone Receptor within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl451

b:32.2
occ:1.00
N A:VAL90 3.0 42.4 1.0
N A:CYS91 3.2 50.7 1.0
OG A:SER61 3.2 43.3 1.0
CE1 A:PHE22 3.6 67.8 1.0
CB A:PRO89 3.6 40.2 1.0
SG A:CYS91 3.7 69.0 1.0
CD A:PRO15 3.7 55.2 1.0
CB A:CYS91 3.7 61.7 1.0
CG A:PRO15 3.7 56.7 1.0
CA A:CYS63 3.7 64.6 1.0
CA A:VAL90 3.8 45.9 1.0
CB A:VAL90 3.9 43.1 1.0
CB A:SER61 3.9 50.6 1.0
C A:VAL90 4.0 47.2 1.0
CA A:PRO89 4.0 41.5 1.0
C A:PRO89 4.0 41.5 1.0
CA A:CYS91 4.0 56.2 1.0
CB A:CYS63 4.2 66.6 1.0
CB A:ALA94 4.2 59.9 1.0
CD1 A:PHE22 4.3 66.8 1.0
N A:CYS63 4.3 66.1 1.0
O A:LEU13 4.5 55.8 1.0
CZ A:PHE22 4.5 67.8 1.0
N A:PRO15 4.5 57.0 1.0
CA A:LEU14 4.7 53.1 1.0
SG A:CYS63 4.7 67.8 1.0
CG1 A:VAL90 4.8 41.0 1.0
C A:CYS63 4.8 64.8 1.0
CD2 A:LEU14 4.9 39.9 1.0
CG2 A:VAL90 4.9 41.1 1.0
C A:LEU14 4.9 53.7 1.0
O A:CYS91 4.9 54.2 1.0

Chlorine binding site 2 out of 2 in 1jdn

Go back to Chlorine Binding Sites List in 1jdn
Chlorine binding site 2 out of 2 in the Crystal Structure of Hormone Receptor


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Hormone Receptor within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl452

b:37.4
occ:1.00
ND1 A:HIS104 3.6 59.4 1.0
CE1 A:HIS104 3.8 59.9 1.0
CG A:HIS104 4.8 57.4 1.0

Reference:

X.L.He, D.C.Chow, M.M.Martick, K.C.Garcia. Allosteric Activation of A Spring-Loaded Natriuretic Peptide Receptor Dimer By Hormone. Science V. 293 1657 2001.
ISSN: ISSN 0036-8075
PubMed: 11533490
DOI: 10.1126/SCIENCE.1062246
Page generated: Sat Dec 12 08:38:38 2020

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