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Chlorine in PDB 1jzn: Crystal Structure of A Galactose-Specific C-Type Lectin

Protein crystallography data

The structure of Crystal Structure of A Galactose-Specific C-Type Lectin, PDB code: 1jzn was solved by J.R.Walker, B.Nagar, N.M.Young, T.Hirama, J.M.Rini, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 37.46 / 2.20
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 63.309, 178.486, 137.832, 90.00, 90.00, 90.00
R / Rfree (%) 19.8 / 25.1

Other elements in 1jzn:

The structure of Crystal Structure of A Galactose-Specific C-Type Lectin also contains other interesting chemical elements:

Calcium (Ca) 5 atoms
Sodium (Na) 5 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of A Galactose-Specific C-Type Lectin (pdb code 1jzn). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of A Galactose-Specific C-Type Lectin, PDB code: 1jzn:

Chlorine binding site 1 out of 1 in 1jzn

Go back to Chlorine Binding Sites List in 1jzn
Chlorine binding site 1 out of 1 in the Crystal Structure of A Galactose-Specific C-Type Lectin


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of A Galactose-Specific C-Type Lectin within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl1140

b:27.2
occ:1.00
N B:TYR46 3.1 24.0 1.0
CA B:ARG45 3.6 27.4 1.0
CB B:TYR46 3.7 24.7 1.0
C B:ARG45 3.8 28.4 1.0
CA B:TYR46 4.0 25.6 1.0
CB B:ARG45 4.1 33.1 1.0
CD1 B:TYR89 4.4 24.8 1.0
O B:HIS44 4.4 25.9 1.0
CE1 B:TYR89 4.4 23.5 1.0
NE B:ARG45 4.6 55.1 1.0
N B:ARG45 4.8 25.0 1.0
NH2 B:ARG45 4.8 61.5 1.0
CZ B:ARG45 4.9 58.9 1.0
CG B:ARG45 5.0 41.7 1.0

Reference:

J.R.Walker, B.Nagar, N.M.Young, T.Hirama, J.M.Rini. X-Ray Crystal Structure of A Galactose-Specific C-Type Lectin Possessing A Novel Decameric Quaternary Structure. Biochemistry V. 43 3783 2004.
ISSN: ISSN 0006-2960
PubMed: 15049685
DOI: 10.1021/BI035871A
Page generated: Fri Jul 19 23:06:42 2024

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