Atomistry » Chlorine » PDB 1k73-1ktw » 1ko3
Atomistry »
  Chlorine »
    PDB 1k73-1ktw »
      1ko3 »

Chlorine in PDB 1ko3: Vim-2, A Zn-Beta-Lactamase From Pseudomonas Aeruginosa with CYS221 Reduced

Enzymatic activity of Vim-2, A Zn-Beta-Lactamase From Pseudomonas Aeruginosa with CYS221 Reduced

All present enzymatic activity of Vim-2, A Zn-Beta-Lactamase From Pseudomonas Aeruginosa with CYS221 Reduced:
3.5.2.6;

Protein crystallography data

The structure of Vim-2, A Zn-Beta-Lactamase From Pseudomonas Aeruginosa with CYS221 Reduced, PDB code: 1ko3 was solved by I.Garcia-Saez, J.-D.Docquier, G.M.Rossolini, O.Dideberg, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 25.00 / 1.91
Space group I 2 2 2
Cell size a, b, c (Å), α, β, γ (°) 67.805, 78.040, 79.648, 90.00, 90.00, 90.00
R / Rfree (%) 20.9 / 25

Other elements in 1ko3:

The structure of Vim-2, A Zn-Beta-Lactamase From Pseudomonas Aeruginosa with CYS221 Reduced also contains other interesting chemical elements:

Zinc (Zn) 3 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Vim-2, A Zn-Beta-Lactamase From Pseudomonas Aeruginosa with CYS221 Reduced (pdb code 1ko3). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Vim-2, A Zn-Beta-Lactamase From Pseudomonas Aeruginosa with CYS221 Reduced, PDB code: 1ko3:

Chlorine binding site 1 out of 1 in 1ko3

Go back to Chlorine Binding Sites List in 1ko3
Chlorine binding site 1 out of 1 in the Vim-2, A Zn-Beta-Lactamase From Pseudomonas Aeruginosa with CYS221 Reduced


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Vim-2, A Zn-Beta-Lactamase From Pseudomonas Aeruginosa with CYS221 Reduced within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl402

b:36.8
occ:1.00
O A:HOH1002 2.9 41.9 1.0
ZN A:ZN2 2.9 28.1 0.8
O A:OH1001 3.3 17.0 1.0
O A:HOH1108 3.5 29.7 1.0
NE2 A:HIS263 3.7 21.3 1.0
OD2 A:ASP120 4.1 22.9 1.0
CE1 A:HIS263 4.3 21.4 1.0
CD2 A:HIS263 4.5 21.3 1.0
CG A:ASP120 4.7 23.2 1.0
CE1 A:HIS196 4.8 11.8 1.0
ZN A:ZN1 4.8 21.8 1.0
OD1 A:ASP120 5.0 23.8 1.0

Reference:

I.Garcia-Saez, J.-D.Docquier, G.M.Rossolini, O.Dideberg. The Three-Dimensional Structure of Vim-2, A Zn-Beta-Lactamase From Pseudomonas Aeruginosa in Its Reduced and Oxidised Form J.Mol.Biol. V. 375 604 2008.
ISSN: ISSN 0022-2836
PubMed: 18061205
DOI: 10.1016/J.JMB.2007.11.012
Page generated: Sat Dec 12 08:40:18 2020

Last articles

Zn in 7VD8
Zn in 7V1R
Zn in 7V1Q
Zn in 7VPF
Zn in 7T85
Zn in 7T5F
Zn in 7NF9
Zn in 7M4M
Zn in 7M4O
Zn in 7M4N
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy