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Chlorine in PDB 1kza: Complex of Mbp-C and Man-A13-Man

Protein crystallography data

The structure of Complex of Mbp-C and Man-A13-Man, PDB code: 1kza was solved by K.K.Ng, A.R.Kolatkar, S.Park-Snyder, H.Feinberg, D.A.Clark, K.Drickamer, W.I.Weis, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.00 / 1.74
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 60.680, 74.890, 57.170, 90.00, 90.00, 90.00
R / Rfree (%) 21.3 / 23.5

Other elements in 1kza:

The structure of Complex of Mbp-C and Man-A13-Man also contains other interesting chemical elements:

Calcium (Ca) 4 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Complex of Mbp-C and Man-A13-Man (pdb code 1kza). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Complex of Mbp-C and Man-A13-Man, PDB code: 1kza:

Chlorine binding site 1 out of 1 in 1kza

Go back to Chlorine Binding Sites List in 1kza
Chlorine binding site 1 out of 1 in the Complex of Mbp-C and Man-A13-Man


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Complex of Mbp-C and Man-A13-Man within 5.0Å range:
probe atom residue distance (Å) B Occ
1:Cl503

b:22.0
occ:1.00
O 1:HOH1018 3.0 19.9 1.0
N 1:ASN199 3.1 10.8 1.0
N 1:CYS214 3.1 10.0 1.0
O 1:HOH1017 3.2 27.2 1.0
CA 1:PRO213 3.6 10.2 1.0
CB 1:ASN199 3.7 10.7 1.0
SG 1:CYS214 3.8 12.6 1.0
C 1:PRO213 3.9 11.2 1.0
CG 1:ASN199 3.9 12.2 1.0
CA 1:ASN199 3.9 9.6 1.0
ND2 1:ASN199 3.9 14.6 1.0
CA 1:GLU198 4.0 12.9 1.0
C 1:GLU198 4.0 11.8 1.0
CB 1:CYS214 4.0 12.1 1.0
O 1:GLY197 4.1 15.2 1.0
CA 1:CYS214 4.2 12.4 1.0
O 1:VAL212 4.2 10.4 1.0
N 1:GLU198 4.4 12.4 1.0
C 1:GLY197 4.4 15.2 1.0
CB 1:PRO213 4.4 11.8 1.0
N 1:CYS200 4.5 8.7 1.0
OD1 1:ASN199 4.6 15.1 1.0
C 1:ASN199 4.6 9.7 1.0
OE1 1:GLN167 4.6 22.1 1.0
N 1:PRO213 4.7 9.9 1.0
C 1:VAL212 4.9 11.1 1.0

Reference:

K.K.Ng, A.R.Kolatkar, S.Park-Snyder, H.Feinberg, D.A.Clark, K.Drickamer, W.I.Weis. Orientation of Bound Ligands in Mannose-Binding Proteins. Implications For Multivalent Ligand Recognition. J.Biol.Chem. V. 277 16088 2002.
ISSN: ISSN 0021-9258
PubMed: 11850428
DOI: 10.1074/JBC.M200493200
Page generated: Fri Jul 19 23:32:50 2024

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