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Chlorine in PDB 1kzc: Complex of Mbp-C and High-Affinity Linear Trimannose

Protein crystallography data

The structure of Complex of Mbp-C and High-Affinity Linear Trimannose, PDB code: 1kzc was solved by K.K.Ng, A.R.Kolatkar, S.Park-Snyder, H.Feinberg, D.A.Clark, K.Drickamer, W.I.Weis, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.00 / 1.85
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 60.800, 75.210, 57.400, 90.00, 90.00, 90.00
R / Rfree (%) 21 / 24.2

Other elements in 1kzc:

The structure of Complex of Mbp-C and High-Affinity Linear Trimannose also contains other interesting chemical elements:

Calcium (Ca) 4 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Complex of Mbp-C and High-Affinity Linear Trimannose (pdb code 1kzc). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Complex of Mbp-C and High-Affinity Linear Trimannose, PDB code: 1kzc:

Chlorine binding site 1 out of 1 in 1kzc

Go back to Chlorine Binding Sites List in 1kzc
Chlorine binding site 1 out of 1 in the Complex of Mbp-C and High-Affinity Linear Trimannose


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Complex of Mbp-C and High-Affinity Linear Trimannose within 5.0Å range:
probe atom residue distance (Å) B Occ
1:Cl503

b:24.0
occ:1.00
O 1:HOH1017 3.0 20.6 1.0
N 1:ASN199 3.1 11.2 1.0
N 1:CYS214 3.1 9.9 1.0
O 1:HOH1018 3.2 18.5 1.0
O 1:HOH1019 3.4 56.3 1.0
CA 1:PRO213 3.6 10.7 1.0
CB 1:ASN199 3.6 11.8 1.0
SG 1:CYS214 3.7 13.8 1.0
ND2 1:ASN199 3.7 14.4 1.0
CG 1:ASN199 3.8 13.4 1.0
CA 1:ASN199 3.9 10.3 1.0
C 1:PRO213 3.9 10.9 1.0
CB 1:CYS214 4.0 13.7 1.0
CA 1:GLU198 4.0 12.9 1.0
C 1:GLU198 4.0 11.2 1.0
O 1:GLY197 4.1 17.6 1.0
CA 1:CYS214 4.2 12.0 1.0
O 1:VAL212 4.2 10.7 1.0
N 1:GLU198 4.4 14.4 1.0
C 1:GLY197 4.4 17.9 1.0
CB 1:PRO213 4.5 11.2 1.0
N 1:CYS200 4.5 10.0 1.0
C 1:ASN199 4.5 9.1 1.0
OD1 1:ASN199 4.6 13.8 1.0
N 1:PRO213 4.7 12.5 1.0
OE1 1:GLN167 4.7 26.1 1.0
C 1:VAL212 4.9 11.4 1.0

Reference:

K.K.Ng, A.R.Kolatkar, S.Park-Snyder, H.Feinberg, D.A.Clark, K.Drickamer, W.I.Weis. Orientation of Bound Ligands in Mannose-Binding Proteins. Implications For Multivalent Ligand Recognition. J.Biol.Chem. V. 277 16088 2002.
ISSN: ISSN 0021-9258
PubMed: 11850428
DOI: 10.1074/JBC.M200493200
Page generated: Sat Dec 12 08:40:50 2020

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