Atomistry » Chlorine » PDB 1l63-1l9m » 1l9c
Atomistry »
  Chlorine »
    PDB 1l63-1l9m »
      1l9c »

Chlorine in PDB 1l9c: Role of Histidine 269 in Catalysis By Monomeric Sarcosine Oxidase

Enzymatic activity of Role of Histidine 269 in Catalysis By Monomeric Sarcosine Oxidase

All present enzymatic activity of Role of Histidine 269 in Catalysis By Monomeric Sarcosine Oxidase:
1.5.3.1;

Protein crystallography data

The structure of Role of Histidine 269 in Catalysis By Monomeric Sarcosine Oxidase, PDB code: 1l9c was solved by G.Zhao, H.Song, Z.-W.Chen, F.S.Mathews, M.S.Jorns, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.00 / 1.90
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 72.706, 69.245, 73.324, 90.00, 94.25, 90.00
R / Rfree (%) 17.1 / 21.6

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Role of Histidine 269 in Catalysis By Monomeric Sarcosine Oxidase (pdb code 1l9c). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Role of Histidine 269 in Catalysis By Monomeric Sarcosine Oxidase, PDB code: 1l9c:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 1l9c

Go back to Chlorine Binding Sites List in 1l9c
Chlorine binding site 1 out of 2 in the Role of Histidine 269 in Catalysis By Monomeric Sarcosine Oxidase


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Role of Histidine 269 in Catalysis By Monomeric Sarcosine Oxidase within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl6402

b:13.9
occ:1.00
O A:HOH6416 3.0 10.7 1.0
O3' A:FAD6400 3.0 10.9 1.0
N A:GLY344 3.1 9.4 1.0
C3' A:FAD6400 3.4 10.3 1.0
N A:THR318 3.4 10.6 1.0
CA A:TYR317 3.6 10.9 1.0
CA A:GLY344 3.7 8.9 1.0
N A:SER343 3.8 10.4 1.0
C A:PHE342 3.8 10.2 1.0
CB A:PHE342 3.9 11.5 1.0
C A:TYR317 4.0 10.8 1.0
O A:MET316 4.0 6.8 1.0
O A:HOH6430 4.0 10.3 1.0
C A:SER343 4.1 11.0 1.0
O A:PHE342 4.2 12.0 1.0
C5' A:FAD6400 4.2 11.7 1.0
CA A:PHE342 4.2 10.9 1.0
CA A:SER343 4.2 9.9 1.0
C1' A:FAD6400 4.2 11.8 1.0
CB A:TYR317 4.4 11.0 1.0
N A:PHE342 4.4 8.9 1.0
O A:THR318 4.4 9.5 1.0
CA A:THR318 4.5 9.5 1.0
C4' A:FAD6400 4.6 9.0 1.0
C2' A:FAD6400 4.6 9.7 1.0
CB A:THR318 4.6 13.4 1.0
C A:GLY344 4.6 10.3 1.0
OG A:SER43 4.7 10.9 1.0
N A:TYR317 4.7 7.6 1.0
OG1 A:THR318 4.8 11.5 1.0
CD1 A:TYR317 4.8 11.1 1.0
C A:MET316 4.8 9.3 1.0
C A:THR318 4.8 12.0 1.0
CB A:SER43 4.8 6.9 1.0
N A:HIS345 4.9 9.6 1.0
CG A:TYR317 4.9 10.7 1.0

Chlorine binding site 2 out of 2 in 1l9c

Go back to Chlorine Binding Sites List in 1l9c
Chlorine binding site 2 out of 2 in the Role of Histidine 269 in Catalysis By Monomeric Sarcosine Oxidase


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Role of Histidine 269 in Catalysis By Monomeric Sarcosine Oxidase within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl7402

b:10.6
occ:1.00
O B:HOH7431 2.8 11.3 1.0
O3' B:FAD7400 3.1 12.4 1.0
N B:GLY344 3.1 9.8 1.0
N B:THR318 3.3 9.5 1.0
C3' B:FAD7400 3.5 10.2 1.0
CA B:TYR317 3.6 10.2 1.0
N B:SER343 3.8 12.8 1.0
CA B:GLY344 3.8 8.5 1.0
C B:TYR317 3.9 9.7 1.0
C B:PHE342 3.9 11.9 1.0
O B:HOH7411 3.9 8.4 1.0
O B:MET316 4.0 5.9 1.0
CB B:PHE342 4.0 10.6 1.0
C B:SER343 4.1 13.2 1.0
C5' B:FAD7400 4.2 8.8 1.0
CA B:SER343 4.2 12.7 1.0
O B:PHE342 4.2 10.1 1.0
CA B:PHE342 4.3 10.7 1.0
C1' B:FAD7400 4.3 10.3 1.0
CA B:THR318 4.3 10.2 1.0
O B:THR318 4.3 8.8 1.0
CB B:TYR317 4.4 8.5 1.0
N B:PHE342 4.4 10.8 1.0
CB B:THR318 4.4 9.7 1.0
C4' B:FAD7400 4.6 10.9 1.0
OG B:SER43 4.6 7.7 1.0
C2' B:FAD7400 4.6 9.3 1.0
OG1 B:THR318 4.6 13.3 1.0
N B:TYR317 4.6 9.9 1.0
C B:THR318 4.7 9.0 1.0
C B:MET316 4.7 9.3 1.0
C B:GLY344 4.8 8.3 1.0
CD1 B:TYR317 4.8 10.4 1.0
CB B:SER43 4.8 10.8 1.0
CG B:TYR317 4.9 11.5 1.0
N B:HIS345 5.0 8.0 1.0

Reference:

G.Zhao, H.Song, Z.W.Chen, F.S.Mathews, M.S.Jorns. Monomeric Sarcosine Oxidase: Role of Histidine 269 in Catalysis. Biochemistry V. 41 9751 2002.
ISSN: ISSN 0006-2960
PubMed: 12146941
DOI: 10.1021/BI020286F
Page generated: Fri Jul 19 23:45:26 2024

Last articles

Zn in 9J0N
Zn in 9J0O
Zn in 9J0P
Zn in 9FJX
Zn in 9EKB
Zn in 9C0F
Zn in 9CAH
Zn in 9CH0
Zn in 9CH3
Zn in 9CH1
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy