Atomistry » Chlorine » PDB 1l9m-1lw9 » 1l9n
Atomistry »
  Chlorine »
    PDB 1l9m-1lw9 »
      1l9n »

Chlorine in PDB 1l9n: Three-Dimensional Structure of the Human Transglutaminase 3 Enzyme: Binding of Calcium Ions Change Structure For Activation

Enzymatic activity of Three-Dimensional Structure of the Human Transglutaminase 3 Enzyme: Binding of Calcium Ions Change Structure For Activation

All present enzymatic activity of Three-Dimensional Structure of the Human Transglutaminase 3 Enzyme: Binding of Calcium Ions Change Structure For Activation:
2.3.2.13;

Protein crystallography data

The structure of Three-Dimensional Structure of the Human Transglutaminase 3 Enzyme: Binding of Calcium Ions Change Structure For Activation, PDB code: 1l9n was solved by B.Ahvazi, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 2.10
Space group P 1
Cell size a, b, c (Å), α, β, γ (°) 57.488, 116.537, 60.768, 93.23, 92.99, 89.51
R / Rfree (%) 18.9 / 23.3

Other elements in 1l9n:

The structure of Three-Dimensional Structure of the Human Transglutaminase 3 Enzyme: Binding of Calcium Ions Change Structure For Activation also contains other interesting chemical elements:

Calcium (Ca) 6 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Three-Dimensional Structure of the Human Transglutaminase 3 Enzyme: Binding of Calcium Ions Change Structure For Activation (pdb code 1l9n). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Three-Dimensional Structure of the Human Transglutaminase 3 Enzyme: Binding of Calcium Ions Change Structure For Activation, PDB code: 1l9n:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 1l9n

Go back to Chlorine Binding Sites List in 1l9n
Chlorine binding site 1 out of 2 in the Three-Dimensional Structure of the Human Transglutaminase 3 Enzyme: Binding of Calcium Ions Change Structure For Activation


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Three-Dimensional Structure of the Human Transglutaminase 3 Enzyme: Binding of Calcium Ions Change Structure For Activation within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl701

b:35.8
occ:1.00
 O A:HOH1074 2.9 20.3 1.0
O A:HOH1133 3.1 21.6 1.0
N A:SER186 3.1 18.1 1.0
CA A:ASP183 3.3 20.1 1.0
N A:ASP183 3.5 20.0 1.0
C A:ASP183 3.6 19.3 1.0
CB A:SER186 3.6 18.9 1.0
CB A:LEU185 3.6 16.7 1.0
N A:LEU185 3.6 17.4 1.0
CA A:SER186 3.9 18.4 1.0
CA A:LEU185 3.9 17.5 1.0
C A:LEU185 3.9 17.9 1.0
N A:ILE184 4.0 18.1 1.0
O A:ASP183 4.0 19.9 1.0
O A:HOH1076 4.1 14.3 1.0
CB A:SER26 4.3 29.3 1.0
C A:ILE184 4.5 17.1 1.0
OD2 A:ASP183 4.5 23.4 1.0
CG A:LEU185 4.6 16.1 1.0
C A:GLU182 4.7 20.2 1.0
CB A:ASP183 4.8 21.7 1.0
OG A:SER26 4.8 29.2 1.0
CA A:ILE184 4.9 17.6 1.0
OG A:SER186 4.9 20.3 1.0
OE1 A:GLU28 4.9 31.9 1.0
O A:GLU181 5.0 17.9 1.0

Chlorine binding site 2 out of 2 in 1l9n

Go back to Chlorine Binding Sites List in 1l9n
Chlorine binding site 2 out of 2 in the Three-Dimensional Structure of the Human Transglutaminase 3 Enzyme: Binding of Calcium Ions Change Structure For Activation


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Three-Dimensional Structure of the Human Transglutaminase 3 Enzyme: Binding of Calcium Ions Change Structure For Activation within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl705

b:40.1
occ:1.00
 O B:HOH1084 3.0 15.5 1.0
O B:HOH1258 3.1 25.4 1.0
N B:SER186 3.2 17.7 1.0
CB B:SER186 3.5 18.5 1.0
CA B:ASP183 3.6 20.3 1.0
CB B:LEU185 3.7 16.5 1.0
N B:ASP183 3.7 20.8 1.0
C B:ASP183 3.8 19.4 1.0
N B:LEU185 3.9 17.1 1.0
CA B:SER186 3.9 17.7 1.0
CB B:SER26 4.1 28.6 1.0
C B:LEU185 4.1 17.7 1.0
O B:ASP183 4.1 20.1 1.0
CA B:LEU185 4.1 16.9 1.0
N B:ILE184 4.3 17.7 1.0
O B:HOH1081 4.3 17.6 1.0
CG B:LEU185 4.5 16.3 1.0
OE1 B:GLU28 4.7 29.2 1.0
OG B:SER26 4.7 28.4 1.0
OD2 B:ASP183 4.7 25.9 1.0
C B:ILE184 4.7 16.0 1.0
OG B:SER186 4.7 19.3 1.0
CD2 B:LEU185 4.8 15.0 1.0
C B:GLU182 5.0 21.0 1.0

Reference:

B.Ahvazi, H.C.Kim, S.H.Kee, Z.Nemes, P.M.Steinert. Three-Dimensional Structure of the Human Transglutaminase 3 Enzyme: Binding of Calcium Ions Changes Structure For Activation. Embo J. V. 21 2055 2002.
ISSN: ISSN 0261-4189
PubMed: 11980702
DOI: 10.1093/EMBOJ/21.9.2055
Page generated: Sat Dec 12 08:41:38 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy