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Chlorine in PDB 1lmt: Structure of A Conformationally Constrained Arg-Gly-Asp Sequence Inserted Into Human Lysozyme

Enzymatic activity of Structure of A Conformationally Constrained Arg-Gly-Asp Sequence Inserted Into Human Lysozyme

All present enzymatic activity of Structure of A Conformationally Constrained Arg-Gly-Asp Sequence Inserted Into Human Lysozyme:
3.2.1.17;

Protein crystallography data

The structure of Structure of A Conformationally Constrained Arg-Gly-Asp Sequence Inserted Into Human Lysozyme, PDB code: 1lmt was solved by M.Matsushima, H.Song, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) N/A / 1.60
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 56.490, 61.460, 33.420, 90.00, 90.00, 90.00
R / Rfree (%) n/a / n/a

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structure of A Conformationally Constrained Arg-Gly-Asp Sequence Inserted Into Human Lysozyme (pdb code 1lmt). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Structure of A Conformationally Constrained Arg-Gly-Asp Sequence Inserted Into Human Lysozyme, PDB code: 1lmt:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 1lmt

Go back to Chlorine Binding Sites List in 1lmt
Chlorine binding site 1 out of 2 in the Structure of A Conformationally Constrained Arg-Gly-Asp Sequence Inserted Into Human Lysozyme


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of A Conformationally Constrained Arg-Gly-Asp Sequence Inserted Into Human Lysozyme within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl145

b:18.4
occ:1.00
N A:SER80 3.3 13.9 1.0
CB A:SER80 3.8 14.1 1.0
CB A:ALA83 3.9 13.0 1.0
CA A:LEU79 4.0 14.5 1.0
CD2 A:LEU79 4.1 18.5 1.0
CA A:SER80 4.1 13.0 1.0
C A:LEU79 4.2 14.1 1.0
O A:SER80 4.3 13.2 1.0
CB A:LEU79 4.4 16.8 1.0
C A:SER80 4.8 12.9 1.0
OG A:SER80 5.0 14.8 1.0
CG A:LEU79 5.0 15.8 1.0

Chlorine binding site 2 out of 2 in 1lmt

Go back to Chlorine Binding Sites List in 1lmt
Chlorine binding site 2 out of 2 in the Structure of A Conformationally Constrained Arg-Gly-Asp Sequence Inserted Into Human Lysozyme


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Structure of A Conformationally Constrained Arg-Gly-Asp Sequence Inserted Into Human Lysozyme within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl146

b:21.7
occ:1.00
O A:HOH265 3.2 22.1 1.0
O A:HOH195 3.3 13.7 1.0
ND2 A:ASN66 3.4 19.5 1.0
CA A:SER80 3.7 13.0 1.0
CB A:SER80 3.7 14.1 1.0
CB A:ASN66 3.9 15.5 1.0
N A:SER80 4.1 13.9 1.0
CG A:ASN66 4.2 17.4 1.0
O A:ASN66 4.2 14.2 1.0
OG A:SER80 4.5 14.8 1.0
C A:LEU79 4.6 14.1 1.0
O A:LEU79 4.7 12.7 1.0
ND2 A:ASN75 4.8 16.8 1.0
C A:ASN66 4.8 14.3 1.0
CA A:ASN66 4.8 14.1 1.0

Reference:

T.Yamada, H.Song, K.Inaka, Y.Shimada, M.Kikuchi, M.Matsushima. Structure of A Conformationally Constrained Arg-Gly-Asp Sequence Inserted Into Human Lysozyme. J.Biol.Chem. V. 270 5687 1995.
ISSN: ISSN 0021-9258
PubMed: 7890692
DOI: 10.1074/JBC.270.11.5687
Page generated: Sat Dec 12 08:41:57 2020

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