Atomistry » Chlorine » PDB 1lwg-1mhl » 1lyj
Atomistry »
  Chlorine »
    PDB 1lwg-1mhl »
      1lyj »

Chlorine in PDB 1lyj: Dissection of Helix Capping in T4 Lysozyme By Structural and Thermodynamic Analysis of Six Amino Acid Substitutions at Thr 59

Protein crystallography data

The structure of Dissection of Helix Capping in T4 Lysozyme By Structural and Thermodynamic Analysis of Six Amino Acid Substitutions at Thr 59, PDB code: 1lyj was solved by J.A.Bell, W.J.Becktel, U.Sauer, W.A.Baase, B.W.Matthews, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) N/A / 1.80
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 60.900, 60.900, 97.100, 90.00, 90.00, 120.00
R / Rfree (%) n/a / n/a

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Dissection of Helix Capping in T4 Lysozyme By Structural and Thermodynamic Analysis of Six Amino Acid Substitutions at Thr 59 (pdb code 1lyj). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Dissection of Helix Capping in T4 Lysozyme By Structural and Thermodynamic Analysis of Six Amino Acid Substitutions at Thr 59, PDB code: 1lyj:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 1lyj

Go back to Chlorine Binding Sites List in 1lyj
Chlorine binding site 1 out of 2 in the Dissection of Helix Capping in T4 Lysozyme By Structural and Thermodynamic Analysis of Six Amino Acid Substitutions at Thr 59


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Dissection of Helix Capping in T4 Lysozyme By Structural and Thermodynamic Analysis of Six Amino Acid Substitutions at Thr 59 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl173

b:28.4
occ:1.00
O A:HOH209 3.0 22.8 1.0
N A:ARG145 3.3 12.5 1.0
N A:ASN144 3.3 8.3 1.0
C A:THR142 3.4 13.9 1.0
CA A:THR142 3.5 5.9 1.0
CB A:THR142 3.6 19.0 1.0
CB A:ASN144 3.7 7.0 1.0
O A:THR142 3.8 14.9 1.0
N A:PRO143 3.8 18.2 1.0
CA A:ASN144 3.8 17.5 1.0
CD A:PRO143 4.1 14.6 1.0
C A:ASN144 4.1 23.7 1.0
CB A:ARG145 4.1 15.3 1.0
CG2 A:THR142 4.2 14.0 1.0
C A:PRO143 4.3 15.0 1.0
CA A:ARG145 4.3 21.2 1.0
CG A:ASN144 4.5 36.4 1.0
CA A:PRO143 4.6 15.3 1.0
ND2 A:ASN144 4.6 31.3 1.0
OG1 A:THR142 4.8 16.3 1.0
N A:THR142 4.9 14.3 1.0
O A:HOH230 4.9 32.9 1.0

Chlorine binding site 2 out of 2 in 1lyj

Go back to Chlorine Binding Sites List in 1lyj
Chlorine binding site 2 out of 2 in the Dissection of Helix Capping in T4 Lysozyme By Structural and Thermodynamic Analysis of Six Amino Acid Substitutions at Thr 59


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Dissection of Helix Capping in T4 Lysozyme By Structural and Thermodynamic Analysis of Six Amino Acid Substitutions at Thr 59 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl178

b:31.2
occ:0.50
O A:HOH215 3.2 16.7 1.0
O A:HOH182 3.5 19.6 1.0
O A:HOH200 3.5 29.8 1.0
O A:HOH246 3.6 65.5 1.0
CE1 A:HIS31 4.0 9.9 1.0
CB A:ALA49 4.0 12.1 1.0
NE2 A:HIS31 4.1 15.2 1.0
O A:HOH282 4.4 47.3 1.0
NE2 A:GLN69 4.5 17.6 1.0
CA A:ALA49 4.6 19.1 1.0
O A:HOH202 4.8 54.6 1.0
CD2 A:LEU66 4.9 16.3 1.0

Reference:

J.A.Bell, W.J.Becktel, U.Sauer, W.A.Baase, B.W.Matthews. Dissection of Helix Capping in T4 Lysozyme By Structural and Thermodynamic Analysis of Six Amino Acid Substitutions at Thr 59. Biochemistry V. 31 3590 1992.
ISSN: ISSN 0006-2960
PubMed: 1567817
DOI: 10.1021/BI00129A006
Page generated: Sat Dec 12 08:42:12 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy