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Chlorine in PDB 1lz5: Structural and Functional Analyses of the Arg-Gly-Asp Sequence Introduced Into Human Lysozyme

Enzymatic activity of Structural and Functional Analyses of the Arg-Gly-Asp Sequence Introduced Into Human Lysozyme

All present enzymatic activity of Structural and Functional Analyses of the Arg-Gly-Asp Sequence Introduced Into Human Lysozyme:
3.2.1.17;

Protein crystallography data

The structure of Structural and Functional Analyses of the Arg-Gly-Asp Sequence Introduced Into Human Lysozyme, PDB code: 1lz5 was solved by M.Matsushima, K.Inaka, T.Yamada, K.Sekiguchi, M.Kikuchi, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 5.00 / 1.80
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 56.610, 60.850, 33.860, 90.00, 90.00, 90.00
R / Rfree (%) n/a / n/a

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structural and Functional Analyses of the Arg-Gly-Asp Sequence Introduced Into Human Lysozyme (pdb code 1lz5). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Structural and Functional Analyses of the Arg-Gly-Asp Sequence Introduced Into Human Lysozyme, PDB code: 1lz5:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 1lz5

Go back to Chlorine Binding Sites List in 1lz5
Chlorine binding site 1 out of 2 in the Structural and Functional Analyses of the Arg-Gly-Asp Sequence Introduced Into Human Lysozyme


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structural and Functional Analyses of the Arg-Gly-Asp Sequence Introduced Into Human Lysozyme within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl131

b:15.8
occ:1.00
O A:HOH232 2.8 28.0 1.0
O A:HOH241 3.0 18.0 1.0
N A:SER80 3.3 10.4 1.0
CB A:SER80 3.7 9.3 1.0
CB A:ALA83 4.0 8.4 1.0
CD2 A:LEU79 4.1 17.3 1.0
CA A:SER80 4.1 10.3 1.0
CA A:LEU79 4.1 13.7 1.0
C A:LEU79 4.2 11.8 1.0
O A:SER80 4.4 9.5 1.0
CB A:LEU79 4.6 14.7 1.0
C A:SER80 4.8 9.7 1.0
OG A:SER80 4.9 10.7 1.0

Chlorine binding site 2 out of 2 in 1lz5

Go back to Chlorine Binding Sites List in 1lz5
Chlorine binding site 2 out of 2 in the Structural and Functional Analyses of the Arg-Gly-Asp Sequence Introduced Into Human Lysozyme


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Structural and Functional Analyses of the Arg-Gly-Asp Sequence Introduced Into Human Lysozyme within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl132

b:16.6
occ:1.00
ND2 A:ASN66 3.4 10.3 1.0
CA A:SER80 3.7 10.3 1.0
CB A:SER80 3.8 9.3 1.0
CB A:ASN66 3.8 10.1 1.0
CG A:ASN66 4.1 11.3 1.0
N A:SER80 4.2 10.4 1.0
O A:ASN66 4.2 6.8 1.0
OG A:SER80 4.5 10.7 1.0
O A:LEU79 4.5 12.4 1.0
C A:LEU79 4.5 11.8 1.0
O A:HOH241 4.5 18.0 1.0
C A:ASN66 4.8 8.6 1.0
CA A:ASN66 4.8 9.4 1.0
ND2 A:ASN75 5.0 13.2 1.0

Reference:

T.Yamada, M.Matsushima, K.Inaka, T.Ohkubo, A.Uyeda, T.Maeda, K.Titani, K.Sekiguchi, M.Kikuchi. Structural and Functional Analyses of the Arg-Gly-Asp Sequence Introduced Into Human Lysozyme. J.Biol.Chem. V. 268 10588 1993.
ISSN: ISSN 0021-9258
PubMed: 8486712
Page generated: Sat Dec 12 08:42:14 2020

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