Chlorine in PDB 1mwu: Structure of Methicillin Acyl-Penicillin Binding Protein 2A From Methicillin Resistant Staphylococcus Aureus Strain 27R at 2.60 A Resolution.
Protein crystallography data
The structure of Structure of Methicillin Acyl-Penicillin Binding Protein 2A From Methicillin Resistant Staphylococcus Aureus Strain 27R at 2.60 A Resolution., PDB code: 1mwu
was solved by
D.C.Lim,
N.C.J.Strynadka,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
24.68 /
2.60
|
Space group
|
P 21 21 21
|
Cell size a, b, c (Å), α, β, γ (°)
|
80.672,
103.210,
186.494,
90.00,
90.00,
90.00
|
R / Rfree (%)
|
24.2 /
30.3
|
Other elements in 1mwu:
The structure of Structure of Methicillin Acyl-Penicillin Binding Protein 2A From Methicillin Resistant Staphylococcus Aureus Strain 27R at 2.60 A Resolution. also contains other interesting chemical elements:
Chlorine Binding Sites:
The binding sites of Chlorine atom in the Structure of Methicillin Acyl-Penicillin Binding Protein 2A From Methicillin Resistant Staphylococcus Aureus Strain 27R at 2.60 A Resolution.
(pdb code 1mwu). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 4 binding sites of Chlorine where determined in the
Structure of Methicillin Acyl-Penicillin Binding Protein 2A From Methicillin Resistant Staphylococcus Aureus Strain 27R at 2.60 A Resolution., PDB code: 1mwu:
Jump to Chlorine binding site number:
1;
2;
3;
4;
Chlorine binding site 1 out
of 4 in 1mwu
Go back to
Chlorine Binding Sites List in 1mwu
Chlorine binding site 1 out
of 4 in the Structure of Methicillin Acyl-Penicillin Binding Protein 2A From Methicillin Resistant Staphylococcus Aureus Strain 27R at 2.60 A Resolution.
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of Structure of Methicillin Acyl-Penicillin Binding Protein 2A From Methicillin Resistant Staphylococcus Aureus Strain 27R at 2.60 A Resolution. within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl704
b:40.1
occ:1.00
|
CD
|
A:CD702
|
2.5
|
42.6
|
1.0
|
O
|
A:HOH811
|
3.1
|
23.1
|
1.0
|
OG1
|
A:THR300
|
3.2
|
43.9
|
1.0
|
OE1
|
B:GLU145
|
3.4
|
39.7
|
1.0
|
CG
|
A:GLU145
|
3.6
|
43.0
|
1.0
|
OE2
|
A:GLU145
|
3.8
|
46.3
|
1.0
|
CD1
|
A:ILE309
|
3.9
|
51.0
|
1.0
|
CG1
|
A:ILE309
|
4.0
|
48.6
|
1.0
|
ND1
|
A:HIS143
|
4.0
|
45.5
|
1.0
|
CG2
|
A:VAL302
|
4.1
|
38.5
|
1.0
|
CD
|
A:GLU145
|
4.2
|
44.0
|
1.0
|
CB
|
A:HIS143
|
4.2
|
42.2
|
1.0
|
CB
|
A:THR300
|
4.3
|
42.0
|
1.0
|
CG2
|
A:THR300
|
4.5
|
36.2
|
1.0
|
CD
|
B:GLU145
|
4.6
|
46.8
|
1.0
|
CG
|
A:HIS143
|
4.6
|
48.9
|
1.0
|
CB
|
A:GLU145
|
5.0
|
38.8
|
1.0
|
OE2
|
B:GLU145
|
5.0
|
39.2
|
1.0
|
|
Chlorine binding site 2 out
of 4 in 1mwu
Go back to
Chlorine Binding Sites List in 1mwu
Chlorine binding site 2 out
of 4 in the Structure of Methicillin Acyl-Penicillin Binding Protein 2A From Methicillin Resistant Staphylococcus Aureus Strain 27R at 2.60 A Resolution.
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of Structure of Methicillin Acyl-Penicillin Binding Protein 2A From Methicillin Resistant Staphylococcus Aureus Strain 27R at 2.60 A Resolution. within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl705
b:38.7
occ:1.00
|
CD
|
B:CD702
|
2.3
|
46.1
|
1.0
|
O
|
A:HOH819
|
2.9
|
27.7
|
1.0
|
OG1
|
B:THR300
|
3.2
|
43.6
|
1.0
|
CG
|
B:GLU145
|
3.3
|
44.5
|
1.0
|
ND1
|
B:HIS143
|
3.5
|
35.5
|
1.0
|
OE1
|
A:GLU145
|
3.5
|
33.2
|
1.0
|
OE2
|
B:GLU145
|
3.5
|
39.2
|
1.0
|
CD
|
B:GLU145
|
3.7
|
46.8
|
1.0
|
CG2
|
B:VAL302
|
3.9
|
48.2
|
1.0
|
CB
|
B:HIS143
|
3.9
|
34.2
|
1.0
|
CD1
|
B:ILE309
|
4.1
|
53.7
|
1.0
|
CG
|
B:HIS143
|
4.1
|
40.7
|
1.0
|
CG1
|
B:ILE309
|
4.1
|
47.4
|
1.0
|
CB
|
B:THR300
|
4.3
|
35.2
|
1.0
|
CD
|
A:GLU145
|
4.4
|
44.0
|
1.0
|
CG2
|
B:THR300
|
4.6
|
34.1
|
1.0
|
CE1
|
B:HIS143
|
4.6
|
45.4
|
1.0
|
OE2
|
A:GLU145
|
4.7
|
46.3
|
1.0
|
CB
|
B:GLU145
|
4.7
|
41.0
|
1.0
|
OE1
|
B:GLU145
|
4.8
|
39.7
|
1.0
|
CD
|
B:ARG298
|
4.8
|
52.6
|
1.0
|
|
Chlorine binding site 3 out
of 4 in 1mwu
Go back to
Chlorine Binding Sites List in 1mwu
Chlorine binding site 3 out
of 4 in the Structure of Methicillin Acyl-Penicillin Binding Protein 2A From Methicillin Resistant Staphylococcus Aureus Strain 27R at 2.60 A Resolution.
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 3 of Structure of Methicillin Acyl-Penicillin Binding Protein 2A From Methicillin Resistant Staphylococcus Aureus Strain 27R at 2.60 A Resolution. within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl706
b:40.3
occ:1.00
|
CD
|
B:CD703
|
2.4
|
46.3
|
1.0
|
NE2
|
B:GLN137
|
3.2
|
60.7
|
1.0
|
NE2
|
B:HIS311
|
3.3
|
45.2
|
1.0
|
O
|
B:GLY135
|
3.6
|
32.3
|
1.0
|
CD
|
B:GLN137
|
3.8
|
59.7
|
1.0
|
CD2
|
B:HIS311
|
3.8
|
39.3
|
1.0
|
CG
|
A:GLN207
|
3.8
|
47.4
|
1.0
|
NE2
|
B:GLN140
|
3.9
|
40.6
|
1.0
|
OD2
|
A:ASP209
|
3.9
|
46.9
|
1.0
|
CB
|
B:ALA310
|
4.0
|
28.5
|
1.0
|
CB
|
A:GLN207
|
4.2
|
49.6
|
1.0
|
OE1
|
B:GLN140
|
4.2
|
46.4
|
1.0
|
OE1
|
B:GLN137
|
4.2
|
59.2
|
1.0
|
CE1
|
B:HIS311
|
4.3
|
39.9
|
1.0
|
CD
|
B:GLN140
|
4.5
|
40.0
|
1.0
|
CG
|
B:GLN137
|
4.5
|
54.8
|
1.0
|
OD1
|
A:ASP209
|
4.6
|
50.8
|
1.0
|
OG1
|
A:THR210
|
4.6
|
46.2
|
1.0
|
CG
|
A:ASP209
|
4.7
|
47.7
|
1.0
|
CB
|
B:GLN137
|
4.8
|
45.8
|
1.0
|
C
|
B:GLY135
|
4.8
|
38.8
|
1.0
|
CG
|
B:HIS311
|
4.9
|
34.5
|
1.0
|
CD
|
A:GLN207
|
4.9
|
55.2
|
1.0
|
O
|
B:ALA310
|
4.9
|
41.5
|
1.0
|
CA
|
B:ALA310
|
5.0
|
35.3
|
1.0
|
|
Chlorine binding site 4 out
of 4 in 1mwu
Go back to
Chlorine Binding Sites List in 1mwu
Chlorine binding site 4 out
of 4 in the Structure of Methicillin Acyl-Penicillin Binding Protein 2A From Methicillin Resistant Staphylococcus Aureus Strain 27R at 2.60 A Resolution.
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 4 of Structure of Methicillin Acyl-Penicillin Binding Protein 2A From Methicillin Resistant Staphylococcus Aureus Strain 27R at 2.60 A Resolution. within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl707
b:47.3
occ:1.00
|
CD
|
A:CD703
|
2.4
|
54.4
|
1.0
|
CG
|
B:GLN207
|
3.5
|
59.4
|
1.0
|
NE2
|
A:HIS311
|
3.5
|
46.2
|
1.0
|
O
|
A:GLY135
|
3.6
|
45.3
|
1.0
|
OD1
|
B:ASP209
|
3.6
|
56.0
|
1.0
|
CD
|
A:GLN137
|
3.8
|
50.6
|
1.0
|
NE2
|
A:GLN137
|
3.8
|
44.1
|
1.0
|
NE2
|
A:GLN140
|
3.9
|
42.5
|
1.0
|
CG
|
A:GLN137
|
3.9
|
49.6
|
1.0
|
CD2
|
A:HIS311
|
4.0
|
42.9
|
1.0
|
CB
|
B:GLN207
|
4.0
|
58.3
|
1.0
|
OG1
|
B:THR210
|
4.0
|
72.0
|
1.0
|
CB
|
A:ALA310
|
4.0
|
48.0
|
1.0
|
OE1
|
A:GLN137
|
4.2
|
46.1
|
1.0
|
CD
|
B:GLN207
|
4.4
|
59.4
|
1.0
|
CG
|
B:ASP209
|
4.4
|
56.5
|
1.0
|
OD2
|
B:ASP209
|
4.5
|
56.5
|
1.0
|
CE1
|
A:HIS311
|
4.5
|
38.1
|
1.0
|
OE1
|
B:GLN207
|
4.7
|
49.8
|
1.0
|
OE1
|
A:GLN140
|
4.7
|
45.3
|
1.0
|
C
|
A:GLY135
|
4.7
|
42.4
|
1.0
|
CD
|
A:GLN140
|
4.8
|
44.2
|
1.0
|
O
|
A:ALA310
|
5.0
|
40.4
|
1.0
|
|
Reference:
D.Lim,
N.C.Strynadka.
Structural Basis For the Beta Lactam Resistance of PBP2A From Methicillin-Resistant Staphylococcus Aureus. Nat.Struct.Biol. V. 9 870 2002.
ISSN: ISSN 1072-8368
PubMed: 12389036
Page generated: Sat Jul 20 00:14:40 2024
|