Atomistry » Chlorine » PDB 1mj5-1nc2 » 1nc2
Atomistry »
  Chlorine »
    PDB 1mj5-1nc2 »
      1nc2 »

Chlorine in PDB 1nc2: Crystal Structure of Monoclonal Antibody 2D12.5 Fab Complexed with Y- Dota

Protein crystallography data

The structure of Crystal Structure of Monoclonal Antibody 2D12.5 Fab Complexed with Y- Dota, PDB code: 1nc2 was solved by T.M.Corneillie, A.J.Fisher, C.F.Meares, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.20 / 2.10
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 67.335, 81.300, 160.923, 90.00, 90.00, 90.00
R / Rfree (%) 20.9 / 24.7

Other elements in 1nc2:

The structure of Crystal Structure of Monoclonal Antibody 2D12.5 Fab Complexed with Y- Dota also contains other interesting chemical elements:

Yttrium (Y) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Monoclonal Antibody 2D12.5 Fab Complexed with Y- Dota (pdb code 1nc2). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Monoclonal Antibody 2D12.5 Fab Complexed with Y- Dota, PDB code: 1nc2:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 1nc2

Go back to Chlorine Binding Sites List in 1nc2
Chlorine binding site 1 out of 2 in the Crystal Structure of Monoclonal Antibody 2D12.5 Fab Complexed with Y- Dota


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Monoclonal Antibody 2D12.5 Fab Complexed with Y- Dota within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl504

b:65.0
occ:1.00
O A:HOH520 2.7 32.3 1.0
C6 B:DOE500 3.8 22.7 1.0
C8 B:DOE500 3.8 23.1 1.0
C4 B:DOE500 4.0 19.2 1.0
C2 B:DOE500 4.2 23.3 1.0
C7 B:DOE500 4.3 22.9 1.0
C5 B:DOE500 4.5 18.3 1.0
C17 B:DOE500 4.6 34.1 1.0
C3 B:DOE500 4.7 20.5 1.0
N4 B:DOE500 4.7 24.6 1.0
C1 B:DOE500 4.7 26.3 1.0
N1 B:DOE500 4.8 25.7 1.0
N3 B:DOE500 4.8 16.7 1.0
N2 B:DOE500 4.9 19.8 1.0

Chlorine binding site 2 out of 2 in 1nc2

Go back to Chlorine Binding Sites List in 1nc2
Chlorine binding site 2 out of 2 in the Crystal Structure of Monoclonal Antibody 2D12.5 Fab Complexed with Y- Dota


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Monoclonal Antibody 2D12.5 Fab Complexed with Y- Dota within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl505

b:45.8
occ:1.00
C8 D:DOE501 3.7 21.6 1.0
C6 D:DOE501 3.7 18.8 1.0
C4 D:DOE501 3.9 17.3 1.0
C2 D:DOE501 4.1 20.7 1.0
O C:HOH604 4.2 46.9 1.0
C7 D:DOE501 4.2 22.4 1.0
C5 D:DOE501 4.3 17.3 1.0
C3 D:DOE501 4.5 20.9 1.0
N4 D:DOE501 4.6 21.8 1.0
N1 D:DOE501 4.7 22.9 1.0
N3 D:DOE501 4.7 15.8 1.0
C1 D:DOE501 4.7 24.8 1.0
N2 D:DOE501 4.8 21.2 1.0
C17 D:DOE501 4.8 31.1 1.0

Reference:

T.M.Corneillie, A.J.Fisher, C.F.Meares. Crystal Structures of Two Complexes of the Rare-Earth-Dota-Binding Antibody 2D12.5: Ligand Generality From A Chiral System. J.Am.Chem.Soc. V. 125 15039 2003.
ISSN: ISSN 0002-7863
PubMed: 14653738
DOI: 10.1021/JA037236Y
Page generated: Sat Dec 12 08:43:24 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy