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Chlorine in PDB 1nc7: Crystal Structure of Thermotoga Maritima 1070

Protein crystallography data

The structure of Crystal Structure of Thermotoga Maritima 1070, PDB code: 1nc7 was solved by Y.Kim, A.Joachimiak, A.Edwards, T.Skarina, A.Savchenko, Midwest Center Forstructural Genomics (Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.40 / 1.55
Space group P 1
Cell size a, b, c (Å), α, β, γ (°) 54.435, 54.453, 55.178, 63.18, 62.27, 89.81
R / Rfree (%) 17 / 19

Other elements in 1nc7:

The structure of Crystal Structure of Thermotoga Maritima 1070 also contains other interesting chemical elements:

Magnesium (Mg) 4 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Thermotoga Maritima 1070 (pdb code 1nc7). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Thermotoga Maritima 1070, PDB code: 1nc7:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 1nc7

Go back to Chlorine Binding Sites List in 1nc7
Chlorine binding site 1 out of 2 in the Crystal Structure of Thermotoga Maritima 1070


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Thermotoga Maritima 1070 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1401

b:4.1
occ:1.00
MG A:MG1501 3.1 4.6 1.0
N B:THR107 3.6 2.2 1.0
N C:THR107 3.6 2.9 1.0
N D:THR107 3.6 1.8 1.0
N A:THR107 3.6 3.1 1.0
O D:THR107 3.8 2.7 1.0
O C:THR107 3.8 2.7 1.0
O B:THR107 3.8 2.7 1.0
O A:THR107 3.8 2.5 1.0
CA B:MSE106 3.8 3.9 1.0
CA C:MSE106 3.9 3.3 1.0
CA A:MSE106 3.9 4.2 1.0
CA D:MSE106 3.9 3.1 1.0
C B:MSE106 4.2 4.0 1.0
CB B:MSE106 4.2 5.1 1.0
CB C:MSE106 4.2 5.3 1.0
C C:MSE106 4.2 3.9 1.0
CB D:MSE106 4.2 5.8 1.0
C A:MSE106 4.2 4.5 1.0
C D:MSE106 4.2 3.8 1.0
CB A:MSE106 4.2 5.5 1.0
MG A:MG1502 4.3 6.2 1.0
CA B:THR107 4.6 2.6 1.0
CA C:THR107 4.6 2.7 1.0
C C:THR107 4.6 2.2 1.0
C B:THR107 4.6 2.4 1.0
C D:THR107 4.6 2.1 1.0
CA D:THR107 4.7 2.0 1.0
CG2 C:THR107 4.7 3.6 1.0
CA A:THR107 4.7 2.6 1.0
CG2 B:THR107 4.7 3.8 1.0
C A:THR107 4.7 2.4 1.0
CG2 A:THR107 4.7 3.2 1.0
CG2 D:THR107 4.7 3.3 1.0
O A:LEU105 4.8 3.6 1.0
O D:LEU105 4.8 2.9 1.0
O B:LEU105 4.8 4.2 1.0
O C:LEU105 4.8 2.9 1.0

Chlorine binding site 2 out of 2 in 1nc7

Go back to Chlorine Binding Sites List in 1nc7
Chlorine binding site 2 out of 2 in the Crystal Structure of Thermotoga Maritima 1070


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Thermotoga Maritima 1070 within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cl1402

b:16.0
occ:1.00
MG A:MG1501 2.7 4.6 1.0
OG1 D:THR108 3.1 3.3 1.0
OG1 C:THR108 3.1 3.9 1.0
OG1 B:THR108 3.1 3.2 1.0
OG1 A:THR108 3.1 3.4 1.0
CB D:THR108 3.5 2.7 1.0
CB C:THR108 3.5 2.9 1.0
CB A:THR108 3.5 2.8 1.0
CB B:THR108 3.5 3.0 1.0
O C:THR107 3.5 2.7 1.0
O B:THR107 3.6 2.7 1.0
O A:THR107 3.6 2.5 1.0
O D:THR107 3.6 2.7 1.0
CA D:THR108 3.6 2.4 1.0
CA C:THR108 3.6 2.7 1.0
CA B:THR108 3.7 3.0 1.0
CA A:THR108 3.7 2.4 1.0
C C:THR107 4.4 2.2 1.0
C D:THR107 4.4 2.1 1.0
C B:THR107 4.4 2.4 1.0
C A:THR107 4.5 2.4 1.0
N C:ILE109 4.5 3.1 1.0
N D:ILE109 4.5 3.1 1.0
N B:ILE109 4.5 2.2 1.0
N A:ILE109 4.5 4.0 1.0
N C:THR108 4.5 2.3 1.0
N D:THR108 4.5 2.7 1.0
N B:THR108 4.6 3.4 1.0
N A:THR108 4.6 3.8 1.0
C C:THR108 4.7 2.5 1.0
C D:THR108 4.7 2.7 1.0
C B:THR108 4.7 3.0 1.0
C A:THR108 4.7 3.1 1.0
CG2 D:THR108 5.0 4.2 1.0

Reference:

Y.Kim, A.Joachimiak, A.Edwards, T.Skarina, A.Savchenko. Crystal Structure Analysis of Thermotoga Maritima Hypothetical Protein TM1070 To Be Published.
Page generated: Sat Dec 12 08:43:32 2020

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